RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 FAM90A1Q86YD7 464 aa18.74■□□□□ 0.59
USF3-203ENST00000491165 GGACTQ9BVM4 153 aa18.74■□□□□ 0.59
USF3-203ENST00000491165 MAP1LC3B2A6NCE7 125 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 EFNA4P52798 201 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 C1orf87Q8N0U7 546 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 DEFB108BQ8NET1 73 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 TAF15Q92804 592 aaKnown RBP eCLIP18.73■□□□□ 0.59
USF3-203ENST00000491165 MAP1LC3BQ9GZQ8 125 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 KCNIP1Q9NZI2 227 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 METRNQ9UJH8 293 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 UBE2L5PA0A1B0GUS4 154 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 HIST1H2BKO60814 126 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 HIST1H2BJP06899 126 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 HIST1H2BOP23527 126 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 HIST1H2BBP33778 126 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 ELLP55199 621 aaPredicted RBP18.73■□□□□ 0.59
USF3-203ENST00000491165 HIST1H2BDP58876 126 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 HIST1H2BCP62807 126 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 HIST2H2BEQ16778 126 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.73■□□□□ 0.59
USF3-203ENST00000491165 ZNF645Q8N7E2 425 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 HIST1H2BHQ93079 126 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 HIST1H2BNQ99877 126 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 HIST1H2BMQ99879 126 aa18.73■□□□□ 0.59
USF3-203ENST00000491165 AKAP9Q99996 3911 aa18.72■□□□□ 0.59
USF3-203ENST00000491165 IGKV1D-17A0A075B6S4 117 aa18.72■□□□□ 0.59
USF3-203ENST00000491165 IFITM10A6NMD0 228 aa18.72■□□□□ 0.59
USF3-203ENST00000491165 CLDN34H7C241 214 aa18.72■□□□□ 0.59
USF3-203ENST00000491165 IRF2P14316 349 aa18.72■□□□□ 0.59
USF3-203ENST00000491165 S100A2P29034 98 aa18.72■□□□□ 0.59
USF3-203ENST00000491165 RND2P52198 227 aa18.72■□□□□ 0.59
USF3-203ENST00000491165 TNFRSF9Q07011 255 aa18.72■□□□□ 0.59
USF3-203ENST00000491165 FIP1L1Q6UN15 594 aaKnown RBP18.72■□□□□ 0.59
USF3-203ENST00000491165 TMEM14EPQ6UXP3 125 aa18.72■□□□□ 0.59
USF3-203ENST00000491165 RBKSQ9H477 322 aa18.72■□□□□ 0.59
USF3-203ENST00000491165 SDF2L1Q9HCN8 221 aa18.72■□□□□ 0.59
USF3-203ENST00000491165 LRRC30A6NM36 301 aa18.71■□□□□ 0.59
USF3-203ENST00000491165 CEBPZOSA8MTT3 80 aa18.71■□□□□ 0.59
USF3-203ENST00000491165 HAND1O96004 215 aa18.71■□□□□ 0.59
USF3-203ENST00000491165 TRGC2P03986 189 aa18.71■□□□□ 0.59
USF3-203ENST00000491165 DUX4L9Q6RFH8 374 aaPredicted RBP18.71■□□□□ 0.59
USF3-203ENST00000491165 ZBTB34Q8NCN2 500 aa18.71■□□□□ 0.59
USF3-203ENST00000491165 FAM210BQ96KR6 192 aa18.71■□□□□ 0.59
USF3-203ENST00000491165 GAR1Q9NY12 217 aaKnown RBP18.71■□□□□ 0.59
USF3-203ENST00000491165 TIMM9Q9Y5J7 89 aa18.71■□□□□ 0.59
USF3-203ENST00000491165 TMEM30CPA0ZSE6 113 aa18.71■□□□□ 0.59
USF3-203ENST00000491165 IGHV2-70P01814 119 aa18.71■□□□□ 0.59
USF3-203ENST00000491165 SMIM21Q3B7S5 101 aa18.71■□□□□ 0.59
USF3-203ENST00000491165 OR8G2PQ6IF36 304 aa18.71■□□□□ 0.59
USF3-203ENST00000491165 CD177Q8N6Q3 437 aa18.71■□□□□ 0.59
USF3-203ENST00000491165 PERPQ96FX8 193 aa18.71■□□□□ 0.59
USF3-203ENST00000491165 HSPB7Q9UBY9 170 aa18.71■□□□□ 0.59
USF3-203ENST00000491165 MSMO1Q15800 293 aa18.7■□□□□ 0.58
USF3-203ENST00000491165 TEX36Q5VZQ5 186 aa18.7■□□□□ 0.58
USF3-203ENST00000491165 GALMQ96C23 342 aa18.7■□□□□ 0.58
USF3-203ENST00000491165 OOEPA6NGQ2 149 aa18.7■□□□□ 0.58
USF3-203ENST00000491165 PMS2P11Q13670 270 aa18.7■□□□□ 0.58
USF3-203ENST00000491165 OR1L1Q8NH94 360 aa18.7■□□□□ 0.58
USF3-203ENST00000491165 OR2D2Q9H210 308 aa18.7■□□□□ 0.58
USF3-203ENST00000491165 SLC39A9Q9NUM3 307 aa18.7■□□□□ 0.58
USF3-203ENST00000491165 PPIAL4EA0A075B759 164 aa18.69■□□□□ 0.58
USF3-203ENST00000491165 SEC14L6B5MCN3 397 aa18.69■□□□□ 0.58
USF3-203ENST00000491165 PPIAL4DF5H284 164 aa18.69■□□□□ 0.58
USF3-203ENST00000491165 TGOLN2O43493 480 aa18.69■□□□□ 0.58
USF3-203ENST00000491165 RAMP3O60896 148 aa18.69■□□□□ 0.58
USF3-203ENST00000491165 ZNF737O75373 536 aa18.69■□□□□ 0.58
USF3-203ENST00000491165 GYPAP02724 150 aa18.69■□□□□ 0.58
USF3-203ENST00000491165 PPIAL4FP0DN26 164 aa18.69■□□□□ 0.58
USF3-203ENST00000491165 OR3A1P47881 315 aa18.69■□□□□ 0.58
USF3-203ENST00000491165 MRPS11P82912 194 aaKnown RBP18.69■□□□□ 0.58
USF3-203ENST00000491165 SPNS3Q6ZMD2 512 aa18.69■□□□□ 0.58
USF3-203ENST00000491165 LHX4Q969G2 390 aa18.69■□□□□ 0.58
USF3-203ENST00000491165 PPIAL4AQ9Y536 164 aa18.69■□□□□ 0.58
USF3-203ENST00000491165 BAHCC1Q9P281 2608 aa18.69■□□□□ 0.58
USF3-203ENST00000491165 TRAV20A0A0B4J274 112 aa18.68■□□□□ 0.58
USF3-203ENST00000491165 PSPNO60542 156 aa18.68■□□□□ 0.58
USF3-203ENST00000491165 SELLP14151 372 aa18.68■□□□□ 0.58
USF3-203ENST00000491165 ATP5J2P56134 94 aa18.68■□□□□ 0.58
USF3-203ENST00000491165 STUMQ69YW2 141 aa18.68■□□□□ 0.58
USF3-203ENST00000491165 C12orf77C9JDV5 145 aa18.68■□□□□ 0.58
USF3-203ENST00000491165 KRASP01116 189 aa18.68■□□□□ 0.58
USF3-203ENST00000491165 IL2RGP31785 369 aa18.68■□□□□ 0.58
USF3-203ENST00000491165 G6PCP35575 357 aa18.68■□□□□ 0.58
USF3-203ENST00000491165 CENPVQ7Z7K6 275 aaPredicted RBP18.68■□□□□ 0.58
USF3-203ENST00000491165 RPP25LQ8N5L8 163 aaKnown RBP18.68■□□□□ 0.58
USF3-203ENST00000491165 EDARADDQ8WWZ3 215 aa18.68■□□□□ 0.58
USF3-203ENST00000491165 CTDSP1Q9GZU7 261 aa18.68■□□□□ 0.58
USF3-203ENST00000491165 CHODLQ9H9P2 273 aa18.68■□□□□ 0.58
USF3-203ENST00000491165 PPP1R2P9O14990 202 aa18.67■□□□□ 0.58
USF3-203ENST00000491165 FCN3O75636 299 aa18.67■□□□□ 0.58
USF3-203ENST00000491165 P0C879 139 aa18.67■□□□□ 0.58
USF3-203ENST00000491165 CATR1Q13166 79 aa18.67■□□□□ 0.58
USF3-203ENST00000491165 OR2B11Q5JQS5 317 aa18.67■□□□□ 0.58
USF3-203ENST00000491165 WDR25Q64LD2 544 aaPredicted RBP18.67■□□□□ 0.58
USF3-203ENST00000491165 ELOA3CA0A087WX78 387 aaPredicted RBP18.67■□□□□ 0.58
USF3-203ENST00000491165 OPN1MWP04001 364 aa18.67■□□□□ 0.58
USF3-203ENST00000491165 OPN1MW2P0DN77 364 aa18.67■□□□□ 0.58
USF3-203ENST00000491165 OPN1MW3P0DN78 364 aa18.67■□□□□ 0.58
USF3-203ENST00000491165 ZNF816Q0VGE8 651 aaPredicted RBP18.67■□□□□ 0.58
USF3-203ENST00000491165 ATP6V1FQ16864 119 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms