RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 SPAG8Q99932 426 aaPredicted RBP6.07□□□□□ -1.44
USP39-216ENST00000490193 PECRQ9BY49 303 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 FBXL7Q9UJT9 491 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 FAT2Q9NYQ8 4349 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 SLC17A2O00624 439 aa6.06□□□□□ -1.44
USP39-216ENST00000490193 MYL12BO14950 172 aa6.06□□□□□ -1.44
USP39-216ENST00000490193 BET1O15155 118 aa6.06□□□□□ -1.44
USP39-216ENST00000490193 CRYGCP07315 174 aa6.06□□□□□ -1.44
USP39-216ENST00000490193 CD3GP09693 182 aa6.06□□□□□ -1.44
USP39-216ENST00000490193 UCHL1P09936 223 aa6.06□□□□□ -1.44
USP39-216ENST00000490193 PSMB6P28072 239 aa6.06□□□□□ -1.44
USP39-216ENST00000490193 TCTAP57738 103 aa6.06□□□□□ -1.44
USP39-216ENST00000490193 IGSF11Q5DX21 431 aa6.06□□□□□ -1.44
USP39-216ENST00000490193 PLAC9Q5JTB6 97 aa6.06□□□□□ -1.44
USP39-216ENST00000490193 CLEC19AQ6UXS0 136 aa6.06□□□□□ -1.44
USP39-216ENST00000490193 C10orf67Q8IYJ2 551 aa6.06□□□□□ -1.44
USP39-216ENST00000490193 PQLC1Q8N2U9 271 aa6.06□□□□□ -1.44
USP39-216ENST00000490193 OR2C3Q8N628 320 aa6.06□□□□□ -1.44
USP39-216ENST00000490193 NANOGP1Q8N7R0 232 aa6.06□□□□□ -1.44
USP39-216ENST00000490193 STPG3Q8N7X2 389 aa6.06□□□□□ -1.44
USP39-216ENST00000490193 FYTTD1Q96QD9 318 aaKnown RBP6.06□□□□□ -1.44
USP39-216ENST00000490193 C5orf66Q9H5L9 145 aa6.06□□□□□ -1.44
USP39-216ENST00000490193 MRPL27Q9P0M9 148 aaKnown RBP6.06□□□□□ -1.44
USP39-216ENST00000490193 TRBV7-1A0A0A6YYK4 115 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 ZNF320A2RRD8 509 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 HMX3A6NHT5 357 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 TSPAN4O14817 238 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 DHFRP00374 187 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 FCGR3AP08637 254 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 IL6RP08887 468 aaPredicted RBP6.05□□□□□ -1.44
USP39-216ENST00000490193 ZNF735P0CB33 412 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 GSTT2P0CG29 244 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 GSTT2BP0CG30 244 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 HIST1H1BP16401 226 aaKnown RBP6.05□□□□□ -1.44
USP39-216ENST00000490193 CTRB1P17538 263 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 MAS1LP35410 378 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 P2RY14Q15391 338 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 SSX1Q16384 188 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 ODF3L2Q3SX64 289 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 HSD17B12Q53GQ0 312 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 CTRB2Q6GPI1 263 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 UNQ9165/PRO28630Q6UXU0 137 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 RBPMS2Q6ZRY4 209 aaKnown RBP6.05□□□□□ -1.44
USP39-216ENST00000490193 Q6ZS49 121 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 SLC38A6Q8IZM9 456 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 OR56B1Q8NGI3 324 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 TMEM167AQ8TBQ9 72 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 EEF1AKMT3Q96AZ1 226 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 GFI1Q99684 422 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 CENPOQ9BU64 300 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 MFFQ9GZY8 342 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 OR51E2Q9H255 320 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 SLC2A9Q9NRM0 540 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 PLCXD1Q9NUJ7 323 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 PSORS1C1Q9UIG5 152 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 KCNK7Q9Y2U2 307 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 SELENOKQ9Y6D0 94 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 MUC4Q99102 2169 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 DNAH2Q9P225 4427 aa6.05□□□□□ -1.44
USP39-216ENST00000490193 DNAH17Q9UFH2 4485 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 IGLV11-55A0A075B6I3 123 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 TMEM238LA0A1B0GVL6 79 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 A0A1B0GW64 132 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 E7EUB6 86 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 KBTBD11O94819 623 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 IGHV3-23P01764 117 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 MYOD1P15172 320 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 RPL27AP46776 148 aaKnown RBP6.04□□□□□ -1.44
USP39-216ENST00000490193 ARFRP1Q13795 201 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 IRF3Q14653 427 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 ZNF585BQ52M93 769 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 LAIR2Q6ISS4 152 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 C19orf35Q6ZS72 473 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 LINC00336Q6ZUF6 198 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 H1FOOQ8IZA3 346 aaPredicted RBP6.04□□□□□ -1.44
USP39-216ENST00000490193 PUSL1Q8N0Z8 303 aaKnown RBP6.04□□□□□ -1.44
USP39-216ENST00000490193 ZNF645Q8N7E2 425 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 VSTM2AQ8TAG5 236 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 FBLIM1Q8WUP2 373 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 GALNT14Q96FL9 552 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 CXorf58Q96LI9 332 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 ZNF436Q9C0F3 470 aaPredicted RBP6.04□□□□□ -1.44
USP39-216ENST00000490193 C11orf68Q9H3H3 251 aaKnown RBP6.04□□□□□ -1.44
USP39-216ENST00000490193 MAP6D1Q9H9H5 199 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 PLGRKTQ9HBL7 147 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 S100A14Q9HCY8 104 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 FKBP14Q9NWM8 211 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 UFC1Q9Y3C8 167 aa6.04□□□□□ -1.44
USP39-216ENST00000490193 RBM7Q9Y580 266 aaKnown RBP6.04□□□□□ -1.44
USP39-216ENST00000490193 A0A1B0GVY2 172 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 DPPA5A6NC42 116 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 MFSD2BA6NFX1 497 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 MFNGO00587 321 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 DENRO43583 198 aaKnown RBP6.03□□□□□ -1.44
USP39-216ENST00000490193 FCGR3BO75015 233 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 CLEC3BP05452 202 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 MED14OSP0DP75 135 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 AREGP15514 252 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 RANBP1P43487 201 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 MRPS15P82914 257 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms