RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 MINDY2Q8NBR6 621 aa13.71□□□□□ -0.21
ERCC3-207ENST00000490062 TMEM230Q96A57 120 aa13.71□□□□□ -0.21
ERCC3-207ENST00000490062 R3HDM4Q96D70 268 aa13.71□□□□□ -0.21
ERCC3-207ENST00000490062 TMEM68Q96MH6 324 aa13.71□□□□□ -0.21
ERCC3-207ENST00000490062 NOL4LQ96MY1 436 aaPredicted RBP13.71□□□□□ -0.21
ERCC3-207ENST00000490062 TP53RKQ96S44 253 aa13.71□□□□□ -0.21
ERCC3-207ENST00000490062 NAA60Q9H7X0 242 aa13.71□□□□□ -0.21
ERCC3-207ENST00000490062 ZNF430Q9H8G1 570 aaPredicted RBP13.71□□□□□ -0.21
ERCC3-207ENST00000490062 FBXO7Q9Y3I1 522 aa13.71□□□□□ -0.21
ERCC3-207ENST00000490062 MARCH11A6NNE9 402 aa13.7□□□□□ -0.22
ERCC3-207ENST00000490062 NDUFB6O95139 128 aa13.7□□□□□ -0.22
ERCC3-207ENST00000490062 IGKV1-39P01597 117 aa13.7□□□□□ -0.22
ERCC3-207ENST00000490062 IGHG4P01861 327 aa13.7□□□□□ -0.22
ERCC3-207ENST00000490062 IGKV1D-39P04432 117 aa13.7□□□□□ -0.22
ERCC3-207ENST00000490062 SLC35B1P78383 322 aa13.7□□□□□ -0.22
ERCC3-207ENST00000490062 CD83Q01151 205 aa13.7□□□□□ -0.22
ERCC3-207ENST00000490062 PJVKQ0ZLH3 352 aa13.7□□□□□ -0.22
ERCC3-207ENST00000490062 FXYD3Q14802 87 aa13.7□□□□□ -0.22
ERCC3-207ENST00000490062 VKORC1L1Q8N0U8 176 aa13.7□□□□□ -0.22
ERCC3-207ENST00000490062 OR5AU1Q8NGC0 362 aa13.7□□□□□ -0.22
ERCC3-207ENST00000490062 ARPC1AQ92747 370 aa13.7□□□□□ -0.22
ERCC3-207ENST00000490062 SEC22AQ96IW7 307 aa13.7□□□□□ -0.22
ERCC3-207ENST00000490062 LYRM1O43325 122 aa13.69□□□□□ -0.22
ERCC3-207ENST00000490062 UPK1BO75841 260 aa13.69□□□□□ -0.22
ERCC3-207ENST00000490062 BRI3O95415 125 aa13.69□□□□□ -0.22
ERCC3-207ENST00000490062 SERPINE2P07093 398 aa13.69□□□□□ -0.22
ERCC3-207ENST00000490062 ELANEP08246 267 aa13.69□□□□□ -0.22
ERCC3-207ENST00000490062 VDAC1P21796 283 aa13.69□□□□□ -0.22
ERCC3-207ENST00000490062 ERVK-16P61578 105 aa13.69□□□□□ -0.22
ERCC3-207ENST00000490062 DHODHQ02127 395 aa13.69□□□□□ -0.22
ERCC3-207ENST00000490062 TMEM267Q0VDI3 215 aaPredicted RBP13.69□□□□□ -0.22
ERCC3-207ENST00000490062 GLYATL2Q8WU03 294 aa13.69□□□□□ -0.22
ERCC3-207ENST00000490062 TMEM222Q9H0R3 208 aa13.69□□□□□ -0.22
ERCC3-207ENST00000490062 PARP11Q9NR21 331 aa13.69□□□□□ -0.22
ERCC3-207ENST00000490062 TMEM140Q9NV12 185 aa13.69□□□□□ -0.22
ERCC3-207ENST00000490062 TRAV41A0A0B4J266 112 aa13.68□□□□□ -0.22
ERCC3-207ENST00000490062 TEX13DA0A0J9YY54 714 aaPredicted RBP13.68□□□□□ -0.22
ERCC3-207ENST00000490062 UPK2O00526 184 aa13.68□□□□□ -0.22
ERCC3-207ENST00000490062 FBXO24O75426 580 aa13.68□□□□□ -0.22
ERCC3-207ENST00000490062 ATG12O94817 140 aa13.68□□□□□ -0.22
ERCC3-207ENST00000490062 CDS2O95674 445 aa13.68□□□□□ -0.22
ERCC3-207ENST00000490062 IGLV1-40P01703 118 aa13.68□□□□□ -0.22
ERCC3-207ENST00000490062 P0C879 139 aa13.68□□□□□ -0.22
ERCC3-207ENST00000490062 UBE2MP61081 183 aaKnown RBP13.68□□□□□ -0.22
ERCC3-207ENST00000490062 RPL8P62917 257 aaKnown RBP13.68□□□□□ -0.22
ERCC3-207ENST00000490062 FOXE3Q13461 319 aa13.68□□□□□ -0.22
ERCC3-207ENST00000490062 TMEM128Q5BJH2 165 aa13.68□□□□□ -0.22
ERCC3-207ENST00000490062 TCTEX1D4Q5JR98 221 aa13.68□□□□□ -0.22
ERCC3-207ENST00000490062 TEX38Q6PEX7 206 aa13.68□□□□□ -0.22
ERCC3-207ENST00000490062 SGPP2Q8IWX5 399 aa13.68□□□□□ -0.22
ERCC3-207ENST00000490062 OR4X2Q8NGF9 303 aa13.68□□□□□ -0.22
ERCC3-207ENST00000490062 IL22RA2Q969J5 263 aa13.68□□□□□ -0.22
ERCC3-207ENST00000490062 CLCC1Q96S66 551 aa13.68□□□□□ -0.22
ERCC3-207ENST00000490062 TSC22D3Q99576 134 aa13.68□□□□□ -0.22
ERCC3-207ENST00000490062 OR5AC1P0C628 307 aa13.67□□□□□ -0.22
ERCC3-207ENST00000490062 PSMB8P28062 276 aa13.67□□□□□ -0.22
ERCC3-207ENST00000490062 SLC6A1P30531 599 aa13.67□□□□□ -0.22
ERCC3-207ENST00000490062 SUPT4H1P63272 117 aaKnown RBP13.67□□□□□ -0.22
ERCC3-207ENST00000490062 SRSF4Q08170 494 aaKnown RBP13.67□□□□□ -0.22
ERCC3-207ENST00000490062 ASAH1Q13510 395 aa13.67□□□□□ -0.22
ERCC3-207ENST00000490062 SSX9Q7RTT3 188 aa13.67□□□□□ -0.22
ERCC3-207ENST00000490062 ADAD2Q8NCV1 583 aaKnown RBP13.67□□□□□ -0.22
ERCC3-207ENST00000490062 DMBX1Q8NFW5 382 aa13.67□□□□□ -0.22
ERCC3-207ENST00000490062 MYOZ3Q8TDC0 251 aa13.67□□□□□ -0.22
ERCC3-207ENST00000490062 SRSF12Q8WXF0 261 aaKnown RBP13.67□□□□□ -0.22
ERCC3-207ENST00000490062 TMEM56Q96MV1 263 aa13.67□□□□□ -0.22
ERCC3-207ENST00000490062 LINC00527Q9UJ94 153 aa13.67□□□□□ -0.22
ERCC3-207ENST00000490062 KCNIP3Q9Y2W7 256 aa13.67□□□□□ -0.22
ERCC3-207ENST00000490062 TMEM56-RWDD3S4R434 201 aa13.67□□□□□ -0.22
ERCC3-207ENST00000490062 PIGBOS1A0A0B4J2F0 54 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 G3V318 75 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 H3BUA1 57 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 ACTL6BO94805 426 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 CNIH1O95406 144 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 KRASP01116 189 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 OPN1MWP04001 364 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 OPN1MW2P0DN77 364 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 OPN1MW3P0DN78 364 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 CD28P10747 220 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 HLA-GP17693 338 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 CCR6P51684 374 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 TMEM187Q14656 261 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 TNXAQ16473 311 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 THOC7Q6I9Y2 204 aaKnown RBP13.66□□□□□ -0.22
ERCC3-207ENST00000490062 C10orf99Q6UWK7 81 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 ZNF329Q86UD4 541 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 SLC25A42Q86VD7 318 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 NDUFA11Q86Y39 141 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 OR5M8Q8NGP6 311 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 SPIN2AQ99865 258 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 SPIN2BQ9BPZ2 258 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 SRSF8Q9BRL6 282 aaKnown RBP13.66□□□□□ -0.22
ERCC3-207ENST00000490062 ZFP57Q9NU63 452 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 TBC1D24Q9ULP9 559 aa13.66□□□□□ -0.22
ERCC3-207ENST00000490062 ADARB2-AS1A8MUL3 147 aa13.65□□□□□ -0.22
ERCC3-207ENST00000490062 G6PCP35575 357 aa13.65□□□□□ -0.22
ERCC3-207ENST00000490062 IFITM3Q01628 133 aa13.65□□□□□ -0.22
ERCC3-207ENST00000490062 SP6Q3SY56 376 aa13.65□□□□□ -0.22
ERCC3-207ENST00000490062 ASPHD1Q5U4P2 390 aa13.65□□□□□ -0.22
ERCC3-207ENST00000490062 FAM219AQ8IW50 185 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms