RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, human

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD9-208	ENST00000489816	P2RY6	Q15077	328 aa		12.98	□□□□□ -0.33
BRD9-208	ENST00000489816	CT45A1	Q5HYN5	189 aa		12.98	□□□□□ -0.33
BRD9-208	ENST00000489816	MBNL2	Q5VZF2	373 aa	Known RBP	12.98	□□□□□ -0.33
BRD9-208	ENST00000489816	CT45A3	Q8NHU0	189 aa		12.98	□□□□□ -0.33
BRD9-208	ENST00000489816	EDARADD	Q8WWZ3	215 aa		12.98	□□□□□ -0.33
BRD9-208	ENST00000489816	WFIKKN1	Q96NZ8	548 aa		12.98	□□□□□ -0.33
BRD9-208	ENST00000489816	IFI27L2	Q9H2X8	130 aa		12.98	□□□□□ -0.33
BRD9-208	ENST00000489816	MS4A5	Q9H3V2	200 aa		12.98	□□□□□ -0.33
BRD9-208	ENST00000489816	MGST3	O14880	152 aa		12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	IGFL2	Q6UWQ7	119 aa		12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	ZNF66	Q6ZN08	573 aa		12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	FAM90A1	Q86YD7	464 aa		12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	TMEM37	Q8WXS4	190 aa		12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	GAR1	Q9NY12	217 aa	Known RBP	12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	TANC2	Q9HCD6	1990 aa		12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	PPP1R2P9	O14990	202 aa		12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	ACTL6B	O94805	426 aa		12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	NDUFB4	O95168	129 aa		12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	ADH4	P08319	380 aa		12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	SNRPC	P09234	159 aa	Known RBP	12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	ERVK-16	P61578	105 aa		12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	PDLIM3	Q53GG5	364 aa	Predicted RBP	12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	C1orf162	Q8NEQ5	155 aa	Predicted RBP	12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	GFOD1	Q9NXC2	390 aa		12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	PTPRB	P23467	1997 aa		12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	WNT2	P09544	360 aa		12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	NDUFB7	P17568	137 aa		12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	CDX1	P47902	265 aa	Predicted RBP	12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	REG1B	P48304	166 aa		12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	SIRT7	Q9NRC8	400 aa		12.97	□□□□□ -0.33
BRD9-208	ENST00000489816	SAA2-SAA4	A0A096LPE2	208 aa		12.96	□□□□□ -0.33
BRD9-208	ENST00000489816		H7BYZ3	331 aa		12.96	□□□□□ -0.33
BRD9-208	ENST00000489816	TMPRSS2	O15393	492 aa		12.96	□□□□□ -0.33
BRD9-208	ENST00000489816	SAA2	P0DJI9	122 aa	Predicted RBP	12.96	□□□□□ -0.33
BRD9-208	ENST00000489816	MLANA	Q16655	118 aa		12.96	□□□□□ -0.33
BRD9-208	ENST00000489816	TMEM170A	Q8WVE7	144 aa		12.96	□□□□□ -0.33
BRD9-208	ENST00000489816	CIB3	Q96Q77	187 aa	Predicted RBP	12.96	□□□□□ -0.33
BRD9-208	ENST00000489816	NAT8	Q9UHE5	227 aa		12.96	□□□□□ -0.33
BRD9-208	ENST00000489816	HPRT1	P00492	218 aa		12.96	□□□□□ -0.33
BRD9-208	ENST00000489816	IGHV3-48	P01763	117 aa		12.96	□□□□□ -0.33
BRD9-208	ENST00000489816	HOXB1	P14653	301 aa	Predicted RBP	12.96	□□□□□ -0.33
BRD9-208	ENST00000489816	GATA2	P23769	480 aa	Predicted RBP	12.96	□□□□□ -0.33
BRD9-208	ENST00000489816	TNFAIP6	P98066	277 aa	Predicted RBP	12.96	□□□□□ -0.33
BRD9-208	ENST00000489816	SPATA31B1P	Q5VZV4	182 aa		12.96	□□□□□ -0.33
BRD9-208	ENST00000489816	C1QL4	Q86Z23	238 aa		12.96	□□□□□ -0.33
BRD9-208	ENST00000489816	WFDC8	Q8IUA0	241 aa		12.96	□□□□□ -0.33
BRD9-208	ENST00000489816	CACNA1B	Q00975	2339 aa		12.96	□□□□□ -0.34
BRD9-208	ENST00000489816	KBTBD11	O94819	623 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	LY86	O95711	162 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	MAS1L	P35410	378 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	GALR1	P47211	349 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	B2M	P61769	119 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	TREML4	Q6UXN2	200 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	ZNF114	Q8NC26	417 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	HIPK2	Q9H2X6	1198 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	GCM1	Q9NP62	436 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	DYSF	O75923	2080 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	PTPRQ	Q9UMZ3	2332 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	IGKV1-16	P04430	117 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	CD82	P27701	267 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	HTD2	P86397	168 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	PNRC1	Q12796	327 aa	Predicted RBP	12.95	□□□□□ -0.34
BRD9-208	ENST00000489816		Q8N7P7	452 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	OR13D1	Q8NGV5	346 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	TCF19	Q9Y242	345 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	ARL14EPL	P0DKL9	152 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	C17orf58	Q2M2W7	97 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	ZNF383	Q8NA42	475 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	PPP1R35	Q8TAP8	253 aa		12.95	□□□□□ -0.34
BRD9-208	ENST00000489816	RELB	Q01201	579 aa		12.94	□□□□□ -0.34
BRD9-208	ENST00000489816	ATP6V1F	Q16864	119 aa		12.94	□□□□□ -0.34
BRD9-208	ENST00000489816	OR4X1	Q8NH49	305 aa		12.94	□□□□□ -0.34
BRD9-208	ENST00000489816	P2RX4	Q99571	388 aa		12.94	□□□□□ -0.34
BRD9-208	ENST00000489816	CXorf65	A6NEN9	183 aa		12.94	□□□□□ -0.34
BRD9-208	ENST00000489816	GFRA3	O60609	400 aa		12.94	□□□□□ -0.34
BRD9-208	ENST00000489816	C1QTNF9	P0C862	333 aa		12.94	□□□□□ -0.34
BRD9-208	ENST00000489816	MRPS11	P82912	194 aa	Known RBP	12.94	□□□□□ -0.34
BRD9-208	ENST00000489816	CYP2G1P	Q6ZSU1	146 aa		12.94	□□□□□ -0.34
BRD9-208	ENST00000489816	MGST2	Q99735	147 aa		12.94	□□□□□ -0.34
BRD9-208	ENST00000489816	SEPSECS	Q9HD40	501 aa	Known RBP	12.94	□□□□□ -0.34
BRD9-208	ENST00000489816	MBD3L4	A6NDZ8	208 aa	Predicted RBP	12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	MBD3L3	A6NE82	208 aa	Predicted RBP	12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	MBD3L5	A6NJ08	208 aa	Predicted RBP	12.93	□□□□□ -0.34
BRD9-208	ENST00000489816		B4DEV8	164 aa		12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	FOXH1	O75593	365 aa		12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	GLRX	P35754	106 aa		12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	THBS3	P49746	956 aa		12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	DLX1	P56177	255 aa		12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	ACOT6	Q3I5F7	207 aa	Predicted RBP	12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	OR4A47	Q6IF82	309 aa		12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	PXMP4	Q9Y6I8	212 aa		12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	MALRD1	Q5VYJ5	2156 aa		12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	C17orf112	F2Z3M2	114 aa		12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	IGHV1-46	P01743	117 aa		12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	GNB1	P62873	340 aa		12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	CISD2	Q8N5K1	135 aa	Known RBP	12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	PRO1933	Q9H354	126 aa		12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	JPT1	Q9UK76	154 aa		12.93	□□□□□ -0.34
BRD9-208	ENST00000489816	WDR83OS	Q9Y284	106 aa		12.93	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms