RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 ZNF343Q6P1L6 599 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 ADAMTSL5Q6ZMM2 481 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 TMEM91Q6ZNR0 172 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 AHSA2Q719I0 299 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 CEACAM19Q7Z692 300 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 HAPLN4Q86UW8 402 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 PDPNQ86YL7 162 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 C8orf59Q8N0T1 100 aaPredicted RBP4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 OR5T1Q8NG75 326 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 OR9G4Q8NGQ1 327 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 TMEM68Q96MH6 324 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 KCNK7Q9Y2U2 307 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 TNCP24821 2201 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 C13orf42A0A1B0GVH6 325 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 IZUMO1RA6ND01 250 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 GAGE12JA6NER3 117 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 TRDCB7Z8K6 153 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 H0Y980 276 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 MYL12BO14950 172 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 CASQ2O14958 399 aaPredicted RBP4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 SLC25A17O43808 307 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 DIRAS3O95661 229 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 TRBV12-3P01733 135 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 SYNJ2BPP57105 145 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 TPBGQ13641 420 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 SPHARQ15513 63 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 HSD17B12Q53GQ0 312 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 RBM48Q5RL73 367 aaKnown RBP4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 OGFRL1Q5TC84 451 aaPredicted RBP4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 BPIFB6Q8NFQ5 453 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 OR6M1Q8NGM8 313 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 ISOC1Q96CN7 298 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 C5orf30Q96GV9 206 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 ARHGAP5-AS1Q96IT6 56 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 USMG5Q96IX5 58 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 URM1Q9BTM9 101 aaKnown RBP4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 TMED9Q9BVK6 235 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 PECRQ9BY49 303 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 CHMP1AQ9HD42 196 aaPredicted RBP4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 PALMDQ9NP74 551 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 SDHAF2Q9NX18 166 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 RDH8Q9NYR8 311 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 PEF1Q9UBV8 284 aaKnown RBP4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 ZNF221Q9UK13 617 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 HYDINQ4G0P3 5121 aa4.8□□□□□ -1.64
PRPF40A-210ENST00000489741 TRBV6-7A0A0A0MS04 114 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 TRBV9A0A0B4J1U6 114 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 M0R1X1 148 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 APOA2P02652 100 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 ARSBP15848 533 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 AADACP22760 399 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 RFX2P48378 723 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 PCP4P48539 62 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 SERPINB10P48595 397 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 PLA2G7Q13093 441 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 P2RY14Q15391 338 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 C2orf76Q3KRA6 126 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 SGPP2Q8IWX5 399 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 Q8N402 240 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 TEX45Q8NA69 505 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 ADAD2Q8NCV1 583 aaKnown RBP4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 OR4A4PQ8NGN8 299 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 GRPEL2Q8TAA5 225 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 SETD6Q8TBK2 473 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 CMSS1Q9BQ75 279 aaKnown RBP4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 CABLES2Q9BTV7 478 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 MND1Q9BWT6 205 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 C12orf4Q9NQ89 552 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 ZNF355PQ9NSJ1 428 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 SLC35D1Q9NTN3 355 aa4.79□□□□□ -1.64
PRPF40A-210ENST00000489741 RBMY1BA6NDE4 496 aaKnown RBP4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 RBMY1EA6NEQ0 496 aaKnown RBP4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 MSGN1A6NI15 193 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 PTGES3LE9PB15 166 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 BMPR1BO00238 502 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 FABP7O15540 132 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 AIREO43918 545 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 OR2A4O95047 310 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 CNIH1O95406 144 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 FCGR3AP08637 254 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 CD3GP09693 182 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 RBMY1DP0C7P1 496 aaKnown RBP4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 GSTT2P0CG29 244 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 GSTT2BP0CG30 244 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 UBE2KP61086 200 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 PRSS8Q16651 343 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 KLK9Q2XQG4 91 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 IGSF11Q5DX21 431 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 LIPKQ5VXJ0 399 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 LCN12Q6JVE5 192 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 Q6ZS49 121 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 OR56B1Q8NGI3 324 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 OR2K2Q8NGT1 345 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 SVIPQ8NHG7 77 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 SNAPC3Q92966 411 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 TMEM203Q969S6 136 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 FAM3DQ96BQ1 224 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 DUSP21Q9H596 190 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 SEPSECSQ9HD40 501 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms