RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 KNTC1P50748 2209 aa14.96□□□□□ -0.01
NPHP4-209ENST00000489180 IGHV3OR16-13A0A075B7E8 117 aa14.96□□□□□ -0.01
NPHP4-209ENST00000489180 IGHV3-74A0A0B4J1X5 117 aa14.96□□□□□ -0.01
NPHP4-209ENST00000489180 CTSSP25774 331 aa14.96□□□□□ -0.01
NPHP4-209ENST00000489180 DLX6P56179 175 aa14.96□□□□□ -0.01
NPHP4-209ENST00000489180 RELQ04864 619 aaPredicted RBP14.96□□□□□ -0.01
NPHP4-209ENST00000489180 SYT8Q8NBV8 401 aa14.96□□□□□ -0.01
NPHP4-209ENST00000489180 OR4C13Q8NGP0 309 aa14.96□□□□□ -0.01
NPHP4-209ENST00000489180 LDLRAD4O15165 306 aa14.96□□□□□ -0.01
NPHP4-209ENST00000489180 C19orf54Q5BKX5 351 aa14.96□□□□□ -0.01
NPHP4-209ENST00000489180 RNF222A6NCQ9 220 aa14.96□□□□□ -0.02
NPHP4-209ENST00000489180 CGAP01215 116 aa14.96□□□□□ -0.02
NPHP4-209ENST00000489180 OR4D5Q8NGN0 318 aa14.96□□□□□ -0.02
NPHP4-209ENST00000489180 LOC390937A0A1W2PQ73 354 aa14.95□□□□□ -0.02
NPHP4-209ENST00000489180 PSMG3Q9BT73 122 aaPredicted RBP14.95□□□□□ -0.02
NPHP4-209ENST00000489180 CARHSP1Q9Y2V2 147 aaKnown RBP14.95□□□□□ -0.02
NPHP4-209ENST00000489180 FOXJ2Q9P0K8 574 aa14.95□□□□□ -0.02
NPHP4-209ENST00000489180 RAXQ9Y2V3 346 aa14.95□□□□□ -0.02
NPHP4-209ENST00000489180 C9orf172C9J069 976 aa14.95□□□□□ -0.02
NPHP4-209ENST00000489180 PNKDQ8N490 385 aa14.95□□□□□ -0.02
NPHP4-209ENST00000489180 IGHV3OR16-10A0A075B7F0 116 aa14.95□□□□□ -0.02
NPHP4-209ENST00000489180 UBE2L6O14933 153 aa14.95□□□□□ -0.02
NPHP4-209ENST00000489180 PRSS2P07478 247 aa14.95□□□□□ -0.02
NPHP4-209ENST00000489180 C19orf48Q6RUI8 117 aa14.95□□□□□ -0.02
NPHP4-209ENST00000489180 SHISA5Q8N114 240 aa14.95□□□□□ -0.02
NPHP4-209ENST00000489180 OTOFQ9HC10 1997 aa14.95□□□□□ -0.02
NPHP4-209ENST00000489180 FAM74A4Q5TZK3 123 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 ZNF600Q6ZNG1 722 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 REC114Q7Z4M0 266 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 TPRP12270 2363 aaKnown RBP14.94□□□□□ -0.02
NPHP4-209ENST00000489180 A8MXK9 166 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 FAM201AQ5SY85 155 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 AMMECR1LQ6DCA0 310 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 MUC21A0A0G2JKD1 596 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 MUC21A0A140T8X8 626 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 SCO2A0A1W2PP80 73 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 A0A1W2PS18 150 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 C17orf98A8MV24 154 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 MUC21Q5SSG8 566 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 OR9G1Q8NH87 305 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 TIMP4Q99727 224 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 CHCHD2Q9Y6H1 151 aaPredicted RBP14.94□□□□□ -0.02
NPHP4-209ENST00000489180 ZNF729A6NN14 1252 aaPredicted RBP14.94□□□□□ -0.02
NPHP4-209ENST00000489180 C12orf77C9JDV5 145 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 SNAI2O43623 268 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 SYNGR3O43761 229 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 IL4P05112 153 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 RNASE1P07998 156 aaKnown RBP14.94□□□□□ -0.02
NPHP4-209ENST00000489180 LGALS3P17931 250 aaKnown RBP14.94□□□□□ -0.02
NPHP4-209ENST00000489180 BTCP35070 178 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 ACSF3Q4G176 576 aaPredicted RBP14.94□□□□□ -0.02
NPHP4-209ENST00000489180 LOC105371267A0A1B0GV96 52 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 FOXI3A8MTJ6 420 aaPredicted RBP14.94□□□□□ -0.02
NPHP4-209ENST00000489180 SRP19P09132 144 aaKnown RBP14.94□□□□□ -0.02
NPHP4-209ENST00000489180 IGFBP2P18065 325 aa14.94□□□□□ -0.02
NPHP4-209ENST00000489180 SRSF3P84103 164 aaKnown RBP14.94□□□□□ -0.02
NPHP4-209ENST00000489180 ATP5G3P48201 142 aa14.93□□□□□ -0.02
NPHP4-209ENST00000489180 ZCCHC14Q8WYQ9 949 aaKnown RBP14.93□□□□□ -0.02
NPHP4-209ENST00000489180 ST6GALNAC6Q969X2 333 aa14.93□□□□□ -0.02
NPHP4-209ENST00000489180 GPR82Q96P67 336 aa14.93□□□□□ -0.02
NPHP4-209ENST00000489180 TM2D1Q9BX74 207 aa14.93□□□□□ -0.02
NPHP4-209ENST00000489180 MRPL32Q9BYC8 188 aaKnown RBP14.93□□□□□ -0.02
NPHP4-209ENST00000489180 GPX1P07203 203 aa14.93□□□□□ -0.02
NPHP4-209ENST00000489180 FGF11Q92914 225 aa14.93□□□□□ -0.02
NPHP4-209ENST00000489180 C14orf144Q96I85 54 aa14.93□□□□□ -0.02
NPHP4-209ENST00000489180 SIGLEC12Q96PQ1 595 aa14.93□□□□□ -0.02
NPHP4-209ENST00000489180 THSD7AQ9UPZ6 1657 aa14.93□□□□□ -0.02
NPHP4-209ENST00000489180 TRBV9A0A0B4J1U6 114 aa14.93□□□□□ -0.02
NPHP4-209ENST00000489180 IGHV3-66A0A0C4DH42 116 aa14.93□□□□□ -0.02
NPHP4-209ENST00000489180 PQLC2LA1A4F0 135 aa14.93□□□□□ -0.02
NPHP4-209ENST00000489180 RBFOX2O43251 390 aaKnown RBP eCLIP14.93□□□□□ -0.025e-8■■■■■ 28.4
NPHP4-209ENST00000489180 ZNF837Q96EG3 531 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-209ENST00000489180 HBBP68871 147 aa14.93□□□□□ -0.02
NPHP4-209ENST00000489180 CLEC2AQ6UVW9 174 aa14.93□□□□□ -0.02
NPHP4-209ENST00000489180 CYP2G1PQ6ZSU1 146 aa14.93□□□□□ -0.02
NPHP4-209ENST00000489180 SEC16AO15027 2179 aa14.93□□□□□ -0.02
NPHP4-209ENST00000489180 COX6CP09669 75 aa14.92□□□□□ -0.02
NPHP4-209ENST00000489180 RPS20P60866 119 aaKnown RBP14.92□□□□□ -0.02
NPHP4-209ENST00000489180 TMEM136Q6ZRR5 245 aa14.92□□□□□ -0.02
NPHP4-209ENST00000489180 DPRXA6NFQ7 191 aa14.92□□□□□ -0.02
NPHP4-209ENST00000489180 LCN2P80188 198 aa14.92□□□□□ -0.02
NPHP4-209ENST00000489180 KCNS1Q96KK3 526 aa14.92□□□□□ -0.02
NPHP4-209ENST00000489180 C18orf15Q96N68 181 aa14.92□□□□□ -0.02
NPHP4-209ENST00000489180 DCTN5Q9BTE1 182 aa14.92□□□□□ -0.02
NPHP4-209ENST00000489180 A0A0G2JMM0 328 aa14.92□□□□□ -0.02
NPHP4-209ENST00000489180 A0A1W2PPB8 328 aa14.92□□□□□ -0.02
NPHP4-209ENST00000489180 A0A1W2PRS3 328 aa14.92□□□□□ -0.02
NPHP4-209ENST00000489180 KIR3DP1A8MWS1 328 aa14.92□□□□□ -0.02
NPHP4-209ENST00000489180 TMEM186Q96B77 213 aa14.92□□□□□ -0.02
NPHP4-209ENST00000489180 GSN-AS1Q9NRJ2 163 aa14.92□□□□□ -0.02
NPHP4-209ENST00000489180 A0A1W2PR77 199 aa14.92□□□□□ -0.02
NPHP4-209ENST00000489180 PPP1R32Q7Z5V6 425 aa14.92□□□□□ -0.02
NPHP4-209ENST00000489180 TRAV30A0A087WSZ9 112 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 TMEM250H0YL14 139 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 IGKV3-20P01619 116 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 LEMD1Q68G75 181 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 ACP7Q6ZNF0 438 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 TCF24Q7RTU0 167 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 CFHR5Q9BXR6 569 aa14.91□□□□□ -0.02
NPHP4-209ENST00000489180 COLQQ9Y215 455 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms