RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 MFAP2P55001 183 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 ELLP55199 621 aaPredicted RBP11.87□□□□□ -0.51
USP48-210ENST00000489108 P2RY14Q15391 338 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 APRG1Q8IVJ8 170 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 VKORC1L1Q8N0U8 176 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 SETD9Q8NE22 299 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 OR11H2Q8NH07 326 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 C9orf16Q9BUW7 83 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 OR51E2Q9H255 320 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 UFC1Q9Y3C8 167 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 PKD1P98161 4303 aa11.87□□□□□ -0.51
USP48-210ENST00000489108 TRBV7-1A0A0A6YYK4 115 aa11.86□□□□□ -0.51
USP48-210ENST00000489108 PRSS29PA6NIE9 313 aa11.86□□□□□ -0.51
USP48-210ENST00000489108 PSMB6P28072 239 aa11.86□□□□□ -0.51
USP48-210ENST00000489108 RPL27AP46776 148 aaKnown RBP11.86□□□□□ -0.51
USP48-210ENST00000489108 RASSF2P50749 326 aa11.86□□□□□ -0.51
USP48-210ENST00000489108 ST3GAL4Q11206 333 aa11.86□□□□□ -0.51
USP48-210ENST00000489108 KLK9Q2XQG4 91 aa11.86□□□□□ -0.51
USP48-210ENST00000489108 PLAC9Q5JTB6 97 aa11.86□□□□□ -0.51
USP48-210ENST00000489108 PHYHIPQ92561 330 aa11.86□□□□□ -0.51
USP48-210ENST00000489108 CABLES2Q9BTV7 478 aa11.86□□□□□ -0.51
USP48-210ENST00000489108 C11orf68Q9H3H3 251 aaKnown RBP11.86□□□□□ -0.51
USP48-210ENST00000489108 KLK9Q9UKQ9 250 aa11.86□□□□□ -0.51
USP48-210ENST00000489108 EFCAB10A6NFE3 127 aa11.85□□□□□ -0.51
USP48-210ENST00000489108 MPTX1A8MV57 137 aa11.85□□□□□ -0.51
USP48-210ENST00000489108 REG1AP05451 166 aa11.85□□□□□ -0.51
USP48-210ENST00000489108 ZNF735P0CB33 412 aa11.85□□□□□ -0.51
USP48-210ENST00000489108 GPR183P32249 361 aa11.85□□□□□ -0.51
USP48-210ENST00000489108 ZNF124Q15973 351 aa11.85□□□□□ -0.51
USP48-210ENST00000489108 LAMTOR1Q6IAA8 161 aa11.85□□□□□ -0.51
USP48-210ENST00000489108 ZNF555Q8NEP9 628 aa11.85□□□□□ -0.51
USP48-210ENST00000489108 CD300LFQ8TDQ1 290 aa11.85□□□□□ -0.51
USP48-210ENST00000489108 IGLV11-55A0A075B6I3 123 aa11.84□□□□□ -0.51
USP48-210ENST00000489108 J3QRK9 145 aa11.84□□□□□ -0.51
USP48-210ENST00000489108 DHFRP00374 187 aa11.84□□□□□ -0.51
USP48-210ENST00000489108 MYOD1P15172 320 aa11.84□□□□□ -0.51
USP48-210ENST00000489108 RPA2P15927 270 aa11.84□□□□□ -0.51
USP48-210ENST00000489108 HIST1H1BP16401 226 aaKnown RBP11.84□□□□□ -0.51
USP48-210ENST00000489108 OR2B11Q5JQS5 317 aa11.84□□□□□ -0.51
USP48-210ENST00000489108 PLET1Q6UQ28 207 aa11.84□□□□□ -0.51
USP48-210ENST00000489108 MAFIPQ8WZ33 124 aa11.84□□□□□ -0.51
USP48-210ENST00000489108 CXorf58Q96LI9 332 aa11.84□□□□□ -0.51
USP48-210ENST00000489108 GINS4Q9BRT9 223 aa11.84□□□□□ -0.51
USP48-210ENST00000489108 ZNF436Q9C0F3 470 aaPredicted RBP11.84□□□□□ -0.51
USP48-210ENST00000489108 KCNK7Q9Y2U2 307 aa11.84□□□□□ -0.51
USP48-210ENST00000489108 OR4C46A6NHA9 309 aa11.83□□□□□ -0.52
USP48-210ENST00000489108 RTL8CO15255 209 aa11.83□□□□□ -0.52
USP48-210ENST00000489108 DEFA4P12838 97 aa11.83□□□□□ -0.52
USP48-210ENST00000489108 PSMD7P51665 324 aa11.83□□□□□ -0.52
USP48-210ENST00000489108 WNT4P56705 351 aa11.83□□□□□ -0.52
USP48-210ENST00000489108 RPL30P62888 115 aaKnown RBP11.83□□□□□ -0.52
USP48-210ENST00000489108 OR4A5Q8NH83 315 aa11.83□□□□□ -0.52
USP48-210ENST00000489108 ZNF502Q8TBZ5 544 aa11.83□□□□□ -0.52
USP48-210ENST00000489108 OR2A7Q96R45 310 aa11.83□□□□□ -0.52
USP48-210ENST00000489108 C6orf62Q9GZU0 229 aaPredicted RBP11.83□□□□□ -0.52
USP48-210ENST00000489108 RAB27BO00194 218 aa11.82□□□□□ -0.52
USP48-210ENST00000489108 KBTBD11O94819 623 aa11.82□□□□□ -0.52
USP48-210ENST00000489108 CDK1P06493 297 aa11.82□□□□□ -0.52
USP48-210ENST00000489108 CTSDP07339 412 aaPredicted RBP11.82□□□□□ -0.52
USP48-210ENST00000489108 FCGR3AP08637 254 aa11.82□□□□□ -0.52
USP48-210ENST00000489108 MAS1LP35410 378 aa11.82□□□□□ -0.52
USP48-210ENST00000489108 MRPS15P82914 257 aaKnown RBP11.82□□□□□ -0.52
USP48-210ENST00000489108 ARFRP1Q13795 201 aa11.82□□□□□ -0.52
USP48-210ENST00000489108 HSD17B12Q53GQ0 312 aa11.82□□□□□ -0.52
USP48-210ENST00000489108 ZFP1Q6P2D0 407 aa11.82□□□□□ -0.52
USP48-210ENST00000489108 H1FOOQ8IZA3 346 aaPredicted RBP11.82□□□□□ -0.52
USP48-210ENST00000489108 PUSL1Q8N0Z8 303 aaKnown RBP11.82□□□□□ -0.52
USP48-210ENST00000489108 TMEM167AQ8TBQ9 72 aa11.82□□□□□ -0.52
USP48-210ENST00000489108 GFI1Q99684 422 aa11.82□□□□□ -0.52
USP48-210ENST00000489108 PLGRKTQ9HBL7 147 aa11.82□□□□□ -0.52
USP48-210ENST00000489108 C11orf94C9JXX5 98 aa11.81□□□□□ -0.52
USP48-210ENST00000489108 SLC17A2O00624 439 aa11.81□□□□□ -0.52
USP48-210ENST00000489108 MYL12BO14950 172 aa11.81□□□□□ -0.52
USP48-210ENST00000489108 ATP5HO75947 161 aa11.81□□□□□ -0.52
USP48-210ENST00000489108 DIRAS3O95661 229 aa11.81□□□□□ -0.52
USP48-210ENST00000489108 SSX9Q7RTT3 188 aa11.81□□□□□ -0.52
USP48-210ENST00000489108 MS4A15Q8N5U1 240 aa11.81□□□□□ -0.52
USP48-210ENST00000489108 NANOGP1Q8N7R0 232 aa11.81□□□□□ -0.52
USP48-210ENST00000489108 OR56B1Q8NGI3 324 aa11.81□□□□□ -0.52
USP48-210ENST00000489108 VSTM2AQ8TAG5 236 aa11.81□□□□□ -0.52
USP48-210ENST00000489108 TMEM190Q8WZ59 177 aa11.81□□□□□ -0.52
USP48-210ENST00000489108 PRELID3BQ9Y3B1 194 aa11.81□□□□□ -0.52
USP48-210ENST00000489108 CGB1A6NKQ9 187 aa11.8□□□□□ -0.52
USP48-210ENST00000489108 M0R2N4 97 aa11.8□□□□□ -0.52
USP48-210ENST00000489108 TGOLN2O43493 480 aa11.8□□□□□ -0.52
USP48-210ENST00000489108 CRHBPP24387 322 aa11.8□□□□□ -0.52
USP48-210ENST00000489108 ADMP35318 185 aa11.8□□□□□ -0.52
USP48-210ENST00000489108 CLDN12P56749 244 aa11.8□□□□□ -0.52
USP48-210ENST00000489108 PLA2G7Q13093 441 aa11.8□□□□□ -0.52
USP48-210ENST00000489108 KCTD9Q7L273 389 aa11.8□□□□□ -0.52
USP48-210ENST00000489108 DAZ1Q9NQZ3 744 aaKnown RBP11.8□□□□□ -0.52
USP48-210ENST00000489108 SMPD3Q9NY59 655 aaPredicted RBP11.8□□□□□ -0.52
USP48-210ENST00000489108 PLA2G2EQ9NZK7 142 aa11.8□□□□□ -0.52
USP48-210ENST00000489108 MRPS7Q9Y2R9 242 aaKnown RBP11.8□□□□□ -0.52
USP48-210ENST00000489108 IGHV4-4A0A075B6R2 117 aa11.79□□□□□ -0.52
USP48-210ENST00000489108 IGHV3OR16-8A0A075B7F1 116 aa11.79□□□□□ -0.52
USP48-210ENST00000489108 ZNF207O43670 478 aaKnown RBP11.79□□□□□ -0.52
USP48-210ENST00000489108 PTBP1P26599 531 aaKnown RBP eCLIP11.79□□□□□ -0.52
USP48-210ENST00000489108 C2orf76Q3KRA6 126 aa11.79□□□□□ -0.52
USP48-210ENST00000489108 ZNF645Q8N7E2 425 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms