RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 FXYD4P59646 89 aa17.55■□□□□ 0.4
COL9A3-213ENST00000489045 ATP5G2Q06055 141 aa17.55■□□□□ 0.4
COL9A3-213ENST00000489045 UBE2NLQ5JXB2 153 aa17.55■□□□□ 0.4
COL9A3-213ENST00000489045 SLC25A42Q86VD7 318 aa17.55■□□□□ 0.4
COL9A3-213ENST00000489045 OR5AP2Q8NGF4 316 aa17.55■□□□□ 0.4
COL9A3-213ENST00000489045 VCX3AQ9NNX9 186 aa17.55■□□□□ 0.4
COL9A3-213ENST00000489045 HUWE1Q7Z6Z7 4374 aaKnown RBP17.54■□□□□ 0.4
COL9A3-213ENST00000489045 BMPR1BO00238 502 aa17.54■□□□□ 0.4
COL9A3-213ENST00000489045 OR2J3O76001 311 aa17.54■□□□□ 0.4
COL9A3-213ENST00000489045 TNFAIP8O95379 198 aa17.54■□□□□ 0.4
COL9A3-213ENST00000489045 HRASP01112 189 aa17.54■□□□□ 0.4
COL9A3-213ENST00000489045 IL6RP08887 468 aaPredicted RBP17.54■□□□□ 0.4
COL9A3-213ENST00000489045 TATDN3Q17R31 274 aa17.54■□□□□ 0.4
COL9A3-213ENST00000489045 C19orf35Q6ZS72 473 aa17.54■□□□□ 0.4
COL9A3-213ENST00000489045 SPAG16Q8N0X2 631 aa17.54■□□□□ 0.4
COL9A3-213ENST00000489045 NECAP1Q8NC96 275 aa17.54■□□□□ 0.4
COL9A3-213ENST00000489045 ZBTB34Q8NCN2 500 aa17.54■□□□□ 0.4
COL9A3-213ENST00000489045 S100A16Q96FQ6 103 aaKnown RBP17.54■□□□□ 0.4
COL9A3-213ENST00000489045 FYTTD1Q96QD9 318 aaKnown RBP17.54■□□□□ 0.4
COL9A3-213ENST00000489045 IFT46Q9NQC8 304 aa17.54■□□□□ 0.4
COL9A3-213ENST00000489045 ZNF257Q9Y2Q1 563 aa17.54■□□□□ 0.4
COL9A3-213ENST00000489045 A0A1B0GW64 132 aa17.53■□□□□ 0.4
COL9A3-213ENST00000489045 E7EUB6 86 aa17.53■□□□□ 0.4
COL9A3-213ENST00000489045 CSN3P07498 182 aa17.53■□□□□ 0.4
COL9A3-213ENST00000489045 MAS1LP35410 378 aa17.53■□□□□ 0.4
COL9A3-213ENST00000489045 TMEM17Q86X19 198 aa17.53■□□□□ 0.4
COL9A3-213ENST00000489045 Q8N1Y9 231 aa17.53■□□□□ 0.4
COL9A3-213ENST00000489045 SAMD12Q8N8I0 201 aa17.53■□□□□ 0.4
COL9A3-213ENST00000489045 GIMAP1Q8WWP7 306 aa17.53■□□□□ 0.4
COL9A3-213ENST00000489045 DPPA5A6NC42 116 aa17.52■□□□□ 0.4
COL9A3-213ENST00000489045 NPIPB5A8MRT5 1133 aa17.52■□□□□ 0.4
COL9A3-213ENST00000489045 SULT1C2O00338 296 aa17.52■□□□□ 0.4
COL9A3-213ENST00000489045 ZNF735P0CB33 412 aa17.52■□□□□ 0.4
COL9A3-213ENST00000489045 CATR1Q13166 79 aa17.52■□□□□ 0.4
COL9A3-213ENST00000489045 C15orf32Q32M92 178 aa17.52■□□□□ 0.4
COL9A3-213ENST00000489045 OR4A47Q6IF82 309 aa17.52■□□□□ 0.4
COL9A3-213ENST00000489045 ZNF818PQ6ZRF7 136 aa17.52■□□□□ 0.4
COL9A3-213ENST00000489045 SLC2A9Q9NRM0 540 aa17.52■□□□□ 0.4
COL9A3-213ENST00000489045 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.51■□□□□ 0.39
COL9A3-213ENST00000489045 RBFOX2O43251 390 aaKnown RBP eCLIP17.51■□□□□ 0.396e-13■■■■□ 23.9
COL9A3-213ENST00000489045 MYOD1P15172 320 aa17.51■□□□□ 0.39
COL9A3-213ENST00000489045 TAS2R20P59543 309 aa17.51■□□□□ 0.39
COL9A3-213ENST00000489045 RPL8P62917 257 aaKnown RBP17.51■□□□□ 0.39
COL9A3-213ENST00000489045 TMEM69Q5SWH9 247 aa17.51■□□□□ 0.39
COL9A3-213ENST00000489045 RCHY1Q96PM5 261 aa17.51■□□□□ 0.39
COL9A3-213ENST00000489045 BET1LQ9NYM9 111 aa17.51■□□□□ 0.39
COL9A3-213ENST00000489045 SIGLEC8Q9NYZ4 499 aa17.51■□□□□ 0.39
COL9A3-213ENST00000489045 EHFQ9NZC4 300 aa17.51■□□□□ 0.39
COL9A3-213ENST00000489045 H0Y980 276 aa17.5■□□□□ 0.39
COL9A3-213ENST00000489045 IGHV4-30-4P0DP06 118 aa17.5■□□□□ 0.39
COL9A3-213ENST00000489045 AREGP15514 252 aa17.5■□□□□ 0.39
COL9A3-213ENST00000489045 HERV-K104P61576 105 aa17.5■□□□□ 0.39
COL9A3-213ENST00000489045 AIFM2Q9BRQ8 373 aa17.5■□□□□ 0.39
COL9A3-213ENST00000489045 HRASLSQ9HDD0 168 aa17.5■□□□□ 0.39
COL9A3-213ENST00000489045 PEMTQ9UBM1 199 aa17.5■□□□□ 0.39
COL9A3-213ENST00000489045 FBXL7Q9UJT9 491 aa17.5■□□□□ 0.39
COL9A3-213ENST00000489045 ANAPC10Q9UM13 185 aa17.5■□□□□ 0.39
COL9A3-213ENST00000489045 HLA-GP17693 338 aa17.49■□□□□ 0.39
COL9A3-213ENST00000489045 SGPP2Q8IWX5 399 aa17.49■□□□□ 0.39
COL9A3-213ENST00000489045 OR51H1Q8NH63 302 aa17.49■□□□□ 0.39
COL9A3-213ENST00000489045 OR4A5Q8NH83 315 aa17.49■□□□□ 0.39
COL9A3-213ENST00000489045 SLC25A46Q96AG3 418 aa17.49■□□□□ 0.39
COL9A3-213ENST00000489045 PPP5D1E7EU14 171 aa17.48■□□□□ 0.39
COL9A3-213ENST00000489045 HPRT1P00492 218 aa17.48■□□□□ 0.39
COL9A3-213ENST00000489045 CRYGCP07315 174 aa17.48■□□□□ 0.39
COL9A3-213ENST00000489045 PSMB6P28072 239 aa17.48■□□□□ 0.39
COL9A3-213ENST00000489045 RFX2P48378 723 aa17.48■□□□□ 0.39
COL9A3-213ENST00000489045 TAS2R31P59538 309 aa17.48■□□□□ 0.39
COL9A3-213ENST00000489045 AADACL3Q5VUY0 350 aa17.48■□□□□ 0.39
COL9A3-213ENST00000489045 LCN12Q6JVE5 192 aa17.48■□□□□ 0.39
COL9A3-213ENST00000489045 FANCD2OSQ96PS1 177 aa17.48■□□□□ 0.39
COL9A3-213ENST00000489045 IZUMO1RA6ND01 250 aa17.47■□□□□ 0.39
COL9A3-213ENST00000489045 CGB1A6NKQ9 187 aa17.47■□□□□ 0.39
COL9A3-213ENST00000489045 NDUFB8O95169 186 aa17.47■□□□□ 0.39
COL9A3-213ENST00000489045 PMP2P02689 132 aa17.47■□□□□ 0.39
COL9A3-213ENST00000489045 REG1AP05451 166 aa17.47■□□□□ 0.39
COL9A3-213ENST00000489045 NQO2P16083 231 aa17.47■□□□□ 0.39
COL9A3-213ENST00000489045 CTRB1P17538 263 aa17.47■□□□□ 0.39
COL9A3-213ENST00000489045 POU2AF1Q16633 256 aa17.47■□□□□ 0.39
COL9A3-213ENST00000489045 FAM209BQ5JX69 171 aa17.47■□□□□ 0.39
COL9A3-213ENST00000489045 CTRB2Q6GPI1 263 aa17.47■□□□□ 0.39
COL9A3-213ENST00000489045 Q8N402 240 aa17.47■□□□□ 0.39
COL9A3-213ENST00000489045 ZNF2Q9BSG1 426 aaPredicted RBP17.47■□□□□ 0.39
COL9A3-213ENST00000489045 ZMAT4Q9H898 229 aa17.47■□□□□ 0.39
COL9A3-213ENST00000489045 C19orf73Q9NVV2 129 aa17.47■□□□□ 0.39
COL9A3-213ENST00000489045 DMRT1Q9Y5R6 373 aa17.47■□□□□ 0.39
COL9A3-213ENST00000489045 TRAV3A0A0B4J244 114 aa17.46■□□□□ 0.39
COL9A3-213ENST00000489045 S1PR2O95136 353 aa17.46■□□□□ 0.39
COL9A3-213ENST00000489045 DHFRP00374 187 aa17.46■□□□□ 0.39
COL9A3-213ENST00000489045 IGHV3-23P01764 117 aa17.46■□□□□ 0.39
COL9A3-213ENST00000489045 HLA-AP01891 365 aaKnown RBP17.46■□□□□ 0.39
COL9A3-213ENST00000489045 EIF4EP06730 217 aaKnown RBP17.46■□□□□ 0.39
COL9A3-213ENST00000489045 GNRHRP30968 328 aa17.46■□□□□ 0.39
COL9A3-213ENST00000489045 PRSS3P35030 304 aa17.46■□□□□ 0.39
COL9A3-213ENST00000489045 NCS1P62166 190 aa17.46■□□□□ 0.39
COL9A3-213ENST00000489045 DHRS11Q6UWP2 260 aa17.46■□□□□ 0.39
COL9A3-213ENST00000489045 OR5H2Q8NGV7 314 aa17.46■□□□□ 0.39
COL9A3-213ENST00000489045 BORCS5Q969J3 196 aa17.46■□□□□ 0.39
COL9A3-213ENST00000489045 MOB3AQ96BX8 217 aa17.46■□□□□ 0.39
COL9A3-213ENST00000489045 KCTD12Q96CX2 325 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms