RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 CCDC160A6NGH7 325 aa11.08□□□□□ -0.64
BRCA1-218ENST00000489037 LINC01619G3V211 115 aa11.08□□□□□ -0.64
BRCA1-218ENST00000489037 IGHV3-11P01762 117 aa11.08□□□□□ -0.64
BRCA1-218ENST00000489037 PRB2P02812 416 aaPredicted RBP11.08□□□□□ -0.64
BRCA1-218ENST00000489037 OR9G9P0C7N8 305 aa11.08□□□□□ -0.64
BRCA1-218ENST00000489037 APELAP0DMC3 54 aa11.08□□□□□ -0.64
BRCA1-218ENST00000489037 NQO2P16083 231 aa11.08□□□□□ -0.64
BRCA1-218ENST00000489037 TAS2R31P59538 309 aa11.08□□□□□ -0.64
BRCA1-218ENST00000489037 ERVK-16P61578 105 aa11.08□□□□□ -0.64
BRCA1-218ENST00000489037 SSBP2P81877 361 aaPredicted RBP11.08□□□□□ -0.64
BRCA1-218ENST00000489037 MRPS10P82664 201 aaKnown RBP11.08□□□□□ -0.64
BRCA1-218ENST00000489037 FHL3Q13643 280 aa11.08□□□□□ -0.64
BRCA1-218ENST00000489037 RNASE10Q5GAN6 216 aaKnown RBP11.08□□□□□ -0.64
BRCA1-218ENST00000489037 PUSL1Q8N0Z8 303 aaKnown RBP11.08□□□□□ -0.64
BRCA1-218ENST00000489037 HRASLSQ9HDD0 168 aa11.08□□□□□ -0.64
BRCA1-218ENST00000489037 SEC14L6B5MCN3 397 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 CTDSP2O14595 271 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 RAMP3O60896 148 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 PGLYRP1O75594 196 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-218ENST00000489037 BRI3O95415 125 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 HSPB1P04792 205 aaKnown RBP11.07□□□□□ -0.64
BRCA1-218ENST00000489037 RLN1P04808 185 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 TBPP20226 339 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 HOXD3P31249 432 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-218ENST00000489037 RPL27AP46776 148 aaKnown RBP11.07□□□□□ -0.64
BRCA1-218ENST00000489037 BRWD1-AS2P59051 145 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 RPL8P62917 257 aaKnown RBP11.07□□□□□ -0.64
BRCA1-218ENST00000489037 MRGPRG-AS1Q2M3A8 158 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 VAX1Q5SQQ9 334 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 DMBX1Q8NFW5 382 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 OR52I2Q8NH67 350 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 DYNC2LI1Q8TCX1 351 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 MRAPQ8TCY5 172 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 ISOC1Q96CN7 298 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 DIRAS2Q96HU8 199 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 USMG5Q96IX5 58 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 TINAGL1Q9GZM7 467 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-218ENST00000489037 C6orf62Q9GZU0 229 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-218ENST00000489037 PLEKHA2Q9HB19 425 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 AURKAIP1Q9NWT8 199 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-218ENST00000489037 BET1LQ9NYM9 111 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 KLK11Q9UBX7 282 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 MTFP1Q9UDX5 166 aa11.07□□□□□ -0.64
BRCA1-218ENST00000489037 GABARAPH6UMI1 98 aa11.06□□□□□ -0.64
BRCA1-218ENST00000489037 OVOL1O14753 267 aa11.06□□□□□ -0.64
BRCA1-218ENST00000489037 F2RP25116 425 aa11.06□□□□□ -0.64
BRCA1-218ENST00000489037 TAS2R19P59542 299 aa11.06□□□□□ -0.64
BRCA1-218ENST00000489037 IL18Q14116 193 aa11.06□□□□□ -0.64
BRCA1-218ENST00000489037 ASPHD1Q5U4P2 390 aa11.06□□□□□ -0.64
BRCA1-218ENST00000489037 OR4A47Q6IF82 309 aa11.06□□□□□ -0.64
BRCA1-218ENST00000489037 LAX1Q8IWV1 398 aa11.06□□□□□ -0.64
BRCA1-218ENST00000489037 SLC38A6Q8IZM9 456 aa11.06□□□□□ -0.64
BRCA1-218ENST00000489037 DGCR14Q96DF8 476 aaKnown RBP11.06□□□□□ -0.64
BRCA1-218ENST00000489037 FYTTD1Q96QD9 318 aaKnown RBP11.06□□□□□ -0.64
BRCA1-218ENST00000489037 ABHD1Q96SE0 405 aa11.06□□□□□ -0.64
BRCA1-218ENST00000489037 FXYD6Q9H0Q3 95 aa11.06□□□□□ -0.64
BRCA1-218ENST00000489037 ALX4Q9H161 411 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-218ENST00000489037 MIXL1Q9H2W2 232 aa11.06□□□□□ -0.64
BRCA1-218ENST00000489037 RANGRFQ9HD47 186 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-218ENST00000489037 COMMD9Q9P000 198 aa11.06□□□□□ -0.64
BRCA1-218ENST00000489037 SORL1Q92673 2214 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 IGHV4OR15-8A0A075B7B6 117 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 A0A087WW49 117 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 H3BMQ9 156 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 M0QYG6 137 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 DHFRP00374 187 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 PGAM2P15259 253 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 HLA-GP17693 338 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 INSL3P51460 131 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 UCP3P55916 312 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 DGCR2P98153 550 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 SSBP1Q04837 148 aaKnown RBP11.05□□□□□ -0.64
BRCA1-218ENST00000489037 PHLDA2Q53GA4 152 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 ARRDC1Q8N5I2 433 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 TTC9CQ8N5M4 171 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 TMEM229BQ8NBD8 167 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 ADAD2Q8NCV1 583 aaKnown RBP11.05□□□□□ -0.64
BRCA1-218ENST00000489037 DCUN1D4Q92564 292 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 RSRP1Q9BUV0 290 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 COMMD5Q9GZQ3 224 aa11.05□□□□□ -0.64
BRCA1-218ENST00000489037 S1PR2O95136 353 aa11.04□□□□□ -0.64
BRCA1-218ENST00000489037 CD3DP04234 171 aa11.04□□□□□ -0.64
BRCA1-218ENST00000489037 ZP3P21754 424 aa11.04□□□□□ -0.64
BRCA1-218ENST00000489037 LPAR6P43657 344 aa11.04□□□□□ -0.64
BRCA1-218ENST00000489037 SLURP1P55000 103 aa11.04□□□□□ -0.64
BRCA1-218ENST00000489037 EGFEM1PQ0D2K5 195 aa11.04□□□□□ -0.64
BRCA1-218ENST00000489037 POU2AF1Q16633 256 aa11.04□□□□□ -0.64
BRCA1-218ENST00000489037 C10orf55Q5SWW7 151 aa11.04□□□□□ -0.64
BRCA1-218ENST00000489037 MCFD2Q8NI22 146 aa11.04□□□□□ -0.64
BRCA1-218ENST00000489037 TMEM140Q9NV12 185 aa11.04□□□□□ -0.64
BRCA1-218ENST00000489037 ZNF257Q9Y2Q1 563 aa11.04□□□□□ -0.64
BRCA1-218ENST00000489037 ANKRD34BA5PLL1 514 aa11.03□□□□□ -0.64
BRCA1-218ENST00000489037 HMX3A6NHT5 357 aa11.03□□□□□ -0.64
BRCA1-218ENST00000489037 FAM223BA6NKX1 122 aa11.03□□□□□ -0.64
BRCA1-218ENST00000489037 UPK2O00526 184 aa11.03□□□□□ -0.64
BRCA1-218ENST00000489037 SNAPC5O75971 98 aa11.03□□□□□ -0.64
BRCA1-218ENST00000489037 RAB3DO95716 219 aa11.03□□□□□ -0.64
BRCA1-218ENST00000489037 ZNF735P0CB33 412 aa11.03□□□□□ -0.64
BRCA1-218ENST00000489037 ATP5G2Q06055 141 aa11.03□□□□□ -0.64
BRCA1-218ENST00000489037 DCTN2Q13561 401 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms