RNA–Protein interactions for RNA: ENST00000488628.1

SUN1-233, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 4

Gene SUN1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-233	ENST00000488628	SULT1C2	O00338	296 aa		13	□□□□□ -0.33
SUN1-233	ENST00000488628	XRCC3	O43542	346 aa		13	□□□□□ -0.33
SUN1-233	ENST00000488628	CREBL2	O60519	120 aa	Predicted RBP	13	□□□□□ -0.33
SUN1-233	ENST00000488628	FXYD4	P59646	89 aa		13	□□□□□ -0.33
SUN1-233	ENST00000488628	RPEL1	Q2QD12	228 aa		13	□□□□□ -0.33
SUN1-233	ENST00000488628	FAM223A	Q8IWN6	122 aa		13	□□□□□ -0.33
SUN1-233	ENST00000488628	TSPAN14	Q8NG11	270 aa		13	□□□□□ -0.33
SUN1-233	ENST00000488628	SLC5A7	Q9GZV3	580 aa		13	□□□□□ -0.33
SUN1-233	ENST00000488628	DMRT1	Q9Y5R6	373 aa		13	□□□□□ -0.33
SUN1-233	ENST00000488628	CGB1	A6NKQ9	187 aa		12.99	□□□□□ -0.33
SUN1-233	ENST00000488628	ZNF735	P0CB33	412 aa		12.99	□□□□□ -0.33
SUN1-233	ENST00000488628	IGHV4-30-4	P0DP06	118 aa		12.99	□□□□□ -0.33
SUN1-233	ENST00000488628	AREG	P15514	252 aa		12.99	□□□□□ -0.33
SUN1-233	ENST00000488628	RPL27A	P46776	148 aa	Known RBP	12.99	□□□□□ -0.33
SUN1-233	ENST00000488628	ADAMTSL5	Q6ZMM2	481 aa		12.99	□□□□□ -0.33
SUN1-233	ENST00000488628	ZNF818P	Q6ZRF7	136 aa		12.99	□□□□□ -0.33
SUN1-233	ENST00000488628	SPAG16	Q8N0X2	631 aa		12.99	□□□□□ -0.33
SUN1-233	ENST00000488628	OR5AP2	Q8NGF4	316 aa		12.99	□□□□□ -0.33
SUN1-233	ENST00000488628		A0A087WXM4	84 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	TRAV3	A0A0B4J244	114 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	PPP5D1	E7EU14	171 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	IGHV3-23	P01764	117 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	HLA-A	P01891	365 aa	Known RBP	12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	EDN2	P20800	178 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	MSMO1	Q15800	293 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	C15orf32	Q32M92	178 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	TIMM50	Q3ZCQ8	353 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	UBE2NL	Q5JXB2	153 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	OR4A47	Q6IF82	309 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	TMEM17	Q86X19	198 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	SAMD12	Q8N8I0	201 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	NECAP1	Q8NC96	275 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	VSTM2A	Q8TAG5	236 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	GIMAP1	Q8WWP7	306 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	S100A16	Q96FQ6	103 aa	Known RBP	12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	RCHY1	Q96PM5	261 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	FANCD2OS	Q96PS1	177 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	THAP7	Q9BT49	309 aa	Predicted RBP	12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	SLC2A9	Q9NRM0	540 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	ZNF257	Q9Y2Q1	563 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628		S4R3C0	116 aa		12.98	□□□□□ -0.33
SUN1-233	ENST00000488628	NPIPB5	A8MRT5	1133 aa		12.97	□□□□□ -0.33
SUN1-233	ENST00000488628	TMEM127	O75204	238 aa		12.97	□□□□□ -0.33
SUN1-233	ENST00000488628	NDUFB8	O95169	186 aa		12.97	□□□□□ -0.33
SUN1-233	ENST00000488628	HRAS	P01112	189 aa		12.97	□□□□□ -0.33
SUN1-233	ENST00000488628	REG1A	P05451	166 aa		12.97	□□□□□ -0.33
SUN1-233	ENST00000488628	MAS1L	P35410	378 aa		12.97	□□□□□ -0.33
SUN1-233	ENST00000488628	KIR2DS2	P43631	304 aa		12.97	□□□□□ -0.33
SUN1-233	ENST00000488628	CBX5	P45973	191 aa		12.97	□□□□□ -0.33
SUN1-233	ENST00000488628	RFX2	P48378	723 aa		12.97	□□□□□ -0.33
SUN1-233	ENST00000488628	MECP2	P51608	486 aa	Known RBP	12.97	□□□□□ -0.33
SUN1-233	ENST00000488628	TAS2R20	P59543	309 aa		12.97	□□□□□ -0.33
SUN1-233	ENST00000488628	RPL8	P62917	257 aa	Known RBP	12.97	□□□□□ -0.33
SUN1-233	ENST00000488628	CROCCP3	Q8IVE0	287 aa		12.97	□□□□□ -0.33
SUN1-233	ENST00000488628	ZBTB34	Q8NCN2	500 aa		12.97	□□□□□ -0.33
SUN1-233	ENST00000488628	C19orf73	Q9NVV2	129 aa		12.97	□□□□□ -0.33
SUN1-233	ENST00000488628	FBXL7	Q9UJT9	491 aa		12.97	□□□□□ -0.33
SUN1-233	ENST00000488628	ANAPC10	Q9UM13	185 aa		12.97	□□□□□ -0.33
SUN1-233	ENST00000488628	PMP2	P02689	132 aa		12.96	□□□□□ -0.33
SUN1-233	ENST00000488628	CRYGC	P07315	174 aa		12.96	□□□□□ -0.33
SUN1-233	ENST00000488628	HLA-G	P17693	338 aa		12.96	□□□□□ -0.33
SUN1-233	ENST00000488628	GNRHR	P30968	328 aa		12.96	□□□□□ -0.33
SUN1-233	ENST00000488628	TATDN3	Q17R31	274 aa		12.96	□□□□□ -0.33
SUN1-233	ENST00000488628	SLC25A42	Q86VD7	318 aa		12.96	□□□□□ -0.33
SUN1-233	ENST00000488628	OR51H1	Q8NH63	302 aa		12.96	□□□□□ -0.33
SUN1-233	ENST00000488628	IFT46	Q9NQC8	304 aa		12.96	□□□□□ -0.33
SUN1-233	ENST00000488628	BET1L	Q9NYM9	111 aa		12.96	□□□□□ -0.33
SUN1-233	ENST00000488628	SIGLEC8	Q9NYZ4	499 aa		12.96	□□□□□ -0.33
SUN1-233	ENST00000488628	EHF	Q9NZC4	300 aa		12.96	□□□□□ -0.33
SUN1-233	ENST00000488628	DYNC2H1	Q8NCM8	4307 aa	Known RBP	12.96	□□□□□ -0.33
SUN1-233	ENST00000488628	DPPA5	A6NC42	116 aa		12.95	□□□□□ -0.34
SUN1-233	ENST00000488628	RBFOX2	O43251	390 aa	Known RBP eCLIP	12.95	□□□□□ -0.34	1e-7	■■■■■ 32
SUN1-233	ENST00000488628	S1PR2	O95136	353 aa		12.95	□□□□□ -0.34
SUN1-233	ENST00000488628	TNFAIP8	O95379	198 aa		12.95	□□□□□ -0.34
SUN1-233	ENST00000488628	EIF4E	P06730	217 aa	Known RBP	12.95	□□□□□ -0.34
SUN1-233	ENST00000488628	RPA2	P15927	270 aa		12.95	□□□□□ -0.34
SUN1-233	ENST00000488628	CTRB1	P17538	263 aa		12.95	□□□□□ -0.34
SUN1-233	ENST00000488628	PSMB6	P28072	239 aa		12.95	□□□□□ -0.34
SUN1-233	ENST00000488628	NCS1	P62166	190 aa		12.95	□□□□□ -0.34
SUN1-233	ENST00000488628	TMEM69	Q5SWH9	247 aa		12.95	□□□□□ -0.34
SUN1-233	ENST00000488628	CTRB2	Q6GPI1	263 aa		12.95	□□□□□ -0.34
SUN1-233	ENST00000488628	DHRS11	Q6UWP2	260 aa		12.95	□□□□□ -0.34
SUN1-233	ENST00000488628	CCDC140	Q96MF4	163 aa		12.95	□□□□□ -0.34
SUN1-233	ENST00000488628	HRASLS	Q9HDD0	168 aa		12.95	□□□□□ -0.34
SUN1-233	ENST00000488628	CSMD3	Q7Z407	3707 aa		12.95	□□□□□ -0.34
SUN1-233	ENST00000488628		A8MZ25	164 aa		12.94	□□□□□ -0.34
SUN1-233	ENST00000488628		H0Y980	276 aa		12.94	□□□□□ -0.34
SUN1-233	ENST00000488628	UPK2	O00526	184 aa		12.94	□□□□□ -0.34
SUN1-233	ENST00000488628	OR2C1	O95371	312 aa		12.94	□□□□□ -0.34
SUN1-233	ENST00000488628	HPRT1	P00492	218 aa		12.94	□□□□□ -0.34
SUN1-233	ENST00000488628	NAT1	P18440	290 aa		12.94	□□□□□ -0.34
SUN1-233	ENST00000488628	OR2B8P	P59922	312 aa		12.94	□□□□□ -0.34
SUN1-233	ENST00000488628	HERV-K104	P61576	105 aa		12.94	□□□□□ -0.34
SUN1-233	ENST00000488628	POU2AF1	Q16633	256 aa		12.94	□□□□□ -0.34
SUN1-233	ENST00000488628	KLK9	Q2XQG4	91 aa		12.94	□□□□□ -0.34
SUN1-233	ENST00000488628	AADACL3	Q5VUY0	350 aa		12.94	□□□□□ -0.34
SUN1-233	ENST00000488628	LYSMD2	Q8IV50	215 aa		12.94	□□□□□ -0.34
SUN1-233	ENST00000488628	SLC25A46	Q96AG3	418 aa		12.94	□□□□□ -0.34
SUN1-233	ENST00000488628	TM2D3	Q9BRN9	247 aa		12.94	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms