RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 MPPED1O15442 326 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 AKAIN1P0CW23 69 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 MAS1LP35410 378 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 ERVK-16P61578 105 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 MRGPRG-AS1Q2M3A8 158 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 PYDC2Q56P42 97 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 C18orf65Q6ZTR6 163 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 SSX9Q7RTT3 188 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 PUSL1Q8N0Z8 303 aaKnown RBP11.75□□□□□ -0.53
CXCL12-207ENST00000488591 ZNF491Q8N8L2 437 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 DMBX1Q8NFW5 382 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 OR5T1Q8NG75 326 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 TERB2Q8NHR7 220 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 ZFAND1Q8TCF1 268 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 C4orf3Q8WVX3 66 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 SRSF12Q8WXF0 261 aaKnown RBP11.75□□□□□ -0.53
CXCL12-207ENST00000488591 ZNF486Q96H40 463 aaPredicted RBP11.75□□□□□ -0.53
CXCL12-207ENST00000488591 SPIN2AQ99865 258 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 SPIN2BQ9BPZ2 258 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 SLA2Q9H6Q3 261 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 HRASLSQ9HDD0 168 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 COMMD9Q9P000 198 aa11.75□□□□□ -0.53
CXCL12-207ENST00000488591 H3BUA1 57 aa11.74□□□□□ -0.53
CXCL12-207ENST00000488591 SOX15O60248 233 aa11.74□□□□□ -0.53
CXCL12-207ENST00000488591 PTBP1P26599 531 aaKnown RBP eCLIP11.74□□□□□ -0.53
CXCL12-207ENST00000488591 ECI1P42126 302 aa11.74□□□□□ -0.53
CXCL12-207ENST00000488591 LPAR6P43657 344 aa11.74□□□□□ -0.53
CXCL12-207ENST00000488591 SSBP2P81877 361 aaPredicted RBP11.74□□□□□ -0.53
CXCL12-207ENST00000488591 SPANXN2Q5MJ10 180 aa11.74□□□□□ -0.53
CXCL12-207ENST00000488591 TBC1D26Q86UD7 250 aa11.74□□□□□ -0.53
CXCL12-207ENST00000488591 LHFPL1Q86WI0 220 aa11.74□□□□□ -0.53
CXCL12-207ENST00000488591 OR4D10Q8NGI6 311 aa11.74□□□□□ -0.53
CXCL12-207ENST00000488591 MYOZ3Q8TDC0 251 aa11.74□□□□□ -0.53
CXCL12-207ENST00000488591 THAP7Q9BT49 309 aaPredicted RBP11.74□□□□□ -0.53
CXCL12-207ENST00000488591 FAM212BQ9NTI7 297 aaPredicted RBP11.74□□□□□ -0.53
CXCL12-207ENST00000488591 BET1LQ9NYM9 111 aa11.74□□□□□ -0.53
CXCL12-207ENST00000488591 DPPA5A6NC42 116 aa11.73□□□□□ -0.53
CXCL12-207ENST00000488591 CCL24O00175 119 aa11.73□□□□□ -0.53
CXCL12-207ENST00000488591 S1PR2O95136 353 aa11.73□□□□□ -0.53
CXCL12-207ENST00000488591 TRGV3P03979 118 aa11.73□□□□□ -0.53
CXCL12-207ENST00000488591 PPP5CP53041 499 aa11.73□□□□□ -0.53
CXCL12-207ENST00000488591 TPPP2P59282 170 aa11.73□□□□□ -0.53
CXCL12-207ENST00000488591 RPL8P62917 257 aaKnown RBP11.73□□□□□ -0.53
CXCL12-207ENST00000488591 POU2AF1Q16633 256 aa11.73□□□□□ -0.53
CXCL12-207ENST00000488591 OR4A47Q6IF82 309 aa11.73□□□□□ -0.53
CXCL12-207ENST00000488591 WFDC9Q8NEX5 89 aa11.73□□□□□ -0.53
CXCL12-207ENST00000488591 MS4A10Q96PG2 267 aa11.73□□□□□ -0.53
CXCL12-207ENST00000488591 SLC2A9Q9NRM0 540 aa11.73□□□□□ -0.53
CXCL12-207ENST00000488591 ANKRD20A5PA0PJZ0 165 aa11.72□□□□□ -0.53
CXCL12-207ENST00000488591 OR9G9P0C7N8 305 aa11.72□□□□□ -0.53
CXCL12-207ENST00000488591 HLA-GP17693 338 aa11.72□□□□□ -0.53
CXCL12-207ENST00000488591 RPL27AP46776 148 aaKnown RBP11.72□□□□□ -0.53
CXCL12-207ENST00000488591 RND3P61587 244 aa11.72□□□□□ -0.53
CXCL12-207ENST00000488591 KIAA0141Q14154 515 aaPredicted RBP11.72□□□□□ -0.53
CXCL12-207ENST00000488591 SLC25A42Q86VD7 318 aa11.72□□□□□ -0.53
CXCL12-207ENST00000488591 MRPL41Q8IXM3 137 aaKnown RBP11.72□□□□□ -0.53
CXCL12-207ENST00000488591 Q8N402 240 aa11.72□□□□□ -0.53
CXCL12-207ENST00000488591 CCDC71LQ8N9Z2 235 aa11.72□□□□□ -0.53
CXCL12-207ENST00000488591 CASTOR1Q8WTX7 329 aa11.72□□□□□ -0.53
CXCL12-207ENST00000488591 RAX2Q96IS3 184 aa11.72□□□□□ -0.53
CXCL12-207ENST00000488591 PRRT1Q99946 306 aa11.72□□□□□ -0.53
CXCL12-207ENST00000488591 COA4Q9NYJ1 87 aa11.72□□□□□ -0.53
CXCL12-207ENST00000488591 COPZ2Q9P299 210 aa11.72□□□□□ -0.53
CXCL12-207ENST00000488591 A0A0G2JLM5 398 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 MARCH11A6NNE9 402 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 UPK2O00526 184 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 DUS4LO95620 317 aaKnown RBP11.71□□□□□ -0.53
CXCL12-207ENST00000488591 KRASP01116 189 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 SERPINE2P07093 398 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 ZNF735P0CB33 412 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 APELAP0DMC3 54 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 FAUP35544 74 aaKnown RBP11.71□□□□□ -0.53
CXCL12-207ENST00000488591 PIGPP57054 158 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 RAB25P57735 213 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 AP3S2P59780 193 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 RUNX1Q01196 453 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 SURF2Q15527 256 aaPredicted RBP11.71□□□□□ -0.53
CXCL12-207ENST00000488591 DEFB136Q30KP8 78 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 ASPHD1Q5U4P2 390 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 FAAP20Q6NZ36 180 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 ETV3LQ6ZN32 361 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 CCDC190Q86UF4 302 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 LINC00482Q8N8I6 264 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 OR4C16Q8NGL9 310 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 MARCH1Q8TCQ1 289 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 RCC1LQ96I51 464 aaKnown RBP11.71□□□□□ -0.53
CXCL12-207ENST00000488591 DUX3Q96PT4 197 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 FYTTD1Q96QD9 318 aaKnown RBP11.71□□□□□ -0.53
CXCL12-207ENST00000488591 OR5B12Q96R08 314 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 P2RX4Q99571 388 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 COMMD5Q9GZQ3 224 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 GNB4Q9HAV0 340 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 TMEM140Q9NV12 185 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 SCP2D1Q9UJQ7 156 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 C14orf166Q9Y224 244 aaKnown RBP11.71□□□□□ -0.53
CXCL12-207ENST00000488591 V9GYH0 126 aa11.71□□□□□ -0.53
CXCL12-207ENST00000488591 C13orf42A0A1B0GVH6 325 aa11.7□□□□□ -0.54
CXCL12-207ENST00000488591 I3L521 148 aa11.7□□□□□ -0.54
CXCL12-207ENST00000488591 SNAPC5O75971 98 aa11.7□□□□□ -0.54
CXCL12-207ENST00000488591 BRI3O95415 125 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms