RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 TRDCB7Z8K6 153 aa6.72□□□□□ -1.33
COL17A1-207ENST00000488320 ZNF207O43670 478 aaKnown RBP6.72□□□□□ -1.33
COL17A1-207ENST00000488320 REG1AP05451 166 aa6.72□□□□□ -1.33
COL17A1-207ENST00000488320 CRYGCP07315 174 aa6.72□□□□□ -1.33
COL17A1-207ENST00000488320 IL6RP08887 468 aaPredicted RBP6.72□□□□□ -1.33
COL17A1-207ENST00000488320 CD3GP09693 182 aa6.72□□□□□ -1.33
COL17A1-207ENST00000488320 RBMY1A1P0DJD3 496 aaKnown RBP6.72□□□□□ -1.33
COL17A1-207ENST00000488320 RBMY1CP0DJD4 496 aa6.72□□□□□ -1.33
COL17A1-207ENST00000488320 SRMP19623 302 aa6.72□□□□□ -1.33
COL17A1-207ENST00000488320 DUTP33316 252 aaKnown RBP6.72□□□□□ -1.33
COL17A1-207ENST00000488320 SERPINB10P48595 397 aa6.72□□□□□ -1.33
COL17A1-207ENST00000488320 ETV1P50549 477 aa6.72□□□□□ -1.33
COL17A1-207ENST00000488320 SSX9Q7RTT3 188 aa6.72□□□□□ -1.33
COL17A1-207ENST00000488320 NKAIN3Q8N8D7 197 aa6.72□□□□□ -1.33
COL17A1-207ENST00000488320 ZFP41Q8N8Y5 198 aa6.72□□□□□ -1.33
COL17A1-207ENST00000488320 Q8NAQ8 132 aa6.72□□□□□ -1.33
COL17A1-207ENST00000488320 OR10J5Q8NHC4 309 aa6.72□□□□□ -1.33
COL17A1-207ENST00000488320 TMEM190Q8WZ59 177 aa6.72□□□□□ -1.33
COL17A1-207ENST00000488320 SLC29A1Q99808 456 aa6.72□□□□□ -1.33
COL17A1-207ENST00000488320 ZNF436Q9C0F3 470 aaPredicted RBP6.72□□□□□ -1.33
COL17A1-207ENST00000488320 DAZ1Q9NQZ3 744 aaKnown RBP6.72□□□□□ -1.33
COL17A1-207ENST00000488320 PNMA8CA0A1B0GUJ8 204 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 E7EUB6 86 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 RAB27BO00194 218 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 TGOLN2O43493 480 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 FCGR3BO75015 233 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 AMBPP02760 352 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 FCGR1AP12314 374 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 MIFP14174 115 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 AREGP15514 252 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 CRHBPP24387 322 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 NPY1RP25929 384 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 GYS2P54840 703 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 RPS11P62280 158 aaKnown RBP eCLIP6.71□□□□□ -1.34
COL17A1-207ENST00000488320 GNGT1P63211 74 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 PAFAH1B2P68402 229 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 DNAL1Q4LDG9 190 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 Q6ZR54 194 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 Q6ZRM9 215 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 ZNF767PQ75MW2 155 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 GBGT1Q8N5D6 347 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 OR4A4PQ8NGN8 299 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 CMTM3Q96MX0 182 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 CMSS1Q9BQ75 279 aaKnown RBP6.71□□□□□ -1.34
COL17A1-207ENST00000488320 TM2D1Q9BX74 207 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 THYN1Q9P016 225 aa6.71□□□□□ -1.34
COL17A1-207ENST00000488320 IGHV3OR16-8A0A075B7F1 116 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 OR2T8A6NH00 312 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 C15orf61A6NNL5 157 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 LINC00473A8K010 186 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 J3QRK9 145 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 SOCS1O15524 211 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 INAFM2P0DMQ5 153 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 GABRB1P18505 474 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 MAS1LP35410 378 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 MRPS15P82914 257 aaKnown RBP6.7□□□□□ -1.34
COL17A1-207ENST00000488320 IGSF11Q5DX21 431 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 OR2B11Q5JQS5 317 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 TTC23Q5W5X9 447 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 STHQ8IWL8 128 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 VKORC1L1Q8N0U8 176 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 VSTM2AQ8TAG5 236 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 ZNF502Q8TBZ5 544 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 C5orf30Q96GV9 206 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 CENPNQ96H22 339 aaPredicted RBP6.7□□□□□ -1.34
COL17A1-207ENST00000488320 OR2A7Q96R45 310 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 RNF2Q99496 336 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 GINS4Q9BRT9 223 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 URM1Q9BTM9 101 aaKnown RBP6.7□□□□□ -1.34
COL17A1-207ENST00000488320 KCNK15Q9H427 330 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 FGF20Q9NP95 211 aaPredicted RBP6.7□□□□□ -1.34
COL17A1-207ENST00000488320 C12orf4Q9NQ89 552 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 MRPS18AQ9NVS2 196 aaKnown RBP6.7□□□□□ -1.34
COL17A1-207ENST00000488320 ZNF446Q9NWS9 450 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 PRELID3BQ9Y3B1 194 aa6.7□□□□□ -1.34
COL17A1-207ENST00000488320 IGLV11-55A0A075B6I3 123 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 ELOA3CA0A087WX78 387 aaPredicted RBP6.69□□□□□ -1.34
COL17A1-207ENST00000488320 A0A0A6YYD4 124 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 K7EMT4 169 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 NDUFA4O00483 81 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 FABP7O15540 132 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 KBTBD11O94819 623 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 LALBAP00709 142 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 ZNF735P0CB33 412 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 MYL12AP19105 171 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 PTBP1P26599 531 aaKnown RBP eCLIP6.69□□□□□ -1.34
COL17A1-207ENST00000488320 DCKP27707 260 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 TNP2Q05952 138 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 PLA2G7Q13093 441 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 ARFRP1Q13795 201 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 C12orf74Q32Q52 190 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 LIPKQ5VXJ0 399 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 LEMD1Q68G75 181 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 RHOXF1Q8NHV9 184 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 DERL3Q96Q80 235 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 SMPXQ9UHP9 88 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 MRPS7Q9Y2R9 242 aaKnown RBP6.69□□□□□ -1.34
COL17A1-207ENST00000488320 ETV7Q9Y603 341 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 AGRNO00468 2067 aa6.69□□□□□ -1.34
COL17A1-207ENST00000488320 TRBV6-7A0A0A0MS04 114 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms