RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 ZNF257Q9Y2Q1 563 aa14.7□□□□□ -0.06
CD55-209ENST00000488171 H0Y980 276 aa14.69□□□□□ -0.06
CD55-209ENST00000488171 C3orf84H3BNL1 204 aa14.69□□□□□ -0.06
CD55-209ENST00000488171 TNFSF12O43508 249 aa14.69□□□□□ -0.06
CD55-209ENST00000488171 OR2J3O76001 311 aa14.69□□□□□ -0.06
CD55-209ENST00000488171 PPYP01298 95 aa14.69□□□□□ -0.06
CD55-209ENST00000488171 FCER2P06734 321 aa14.69□□□□□ -0.06
CD55-209ENST00000488171 ZNF735P0CB33 412 aa14.69□□□□□ -0.06
CD55-209ENST00000488171 TGFBR1P36897 503 aa14.69□□□□□ -0.06
CD55-209ENST00000488171 TM2D3Q9BRN9 247 aa14.69□□□□□ -0.06
CD55-209ENST00000488171 DIABLOQ9NR28 239 aa14.69□□□□□ -0.06
CD55-209ENST00000488171 IZUMO1RA6ND01 250 aa14.68□□□□□ -0.06
CD55-209ENST00000488171 NPIPB5A8MRT5 1133 aa14.68□□□□□ -0.06
CD55-209ENST00000488171 TMEM127O75204 238 aa14.68□□□□□ -0.06
CD55-209ENST00000488171 MAS1LP35410 378 aa14.68□□□□□ -0.06
CD55-209ENST00000488171 RPL27AP46776 148 aaKnown RBP14.68□□□□□ -0.06
CD55-209ENST00000488171 MECP2P51608 486 aaKnown RBP14.68□□□□□ -0.06
CD55-209ENST00000488171 C15orf32Q32M92 178 aa14.68□□□□□ -0.06
CD55-209ENST00000488171 SSX9Q7RTT3 188 aa14.68□□□□□ -0.06
CD55-209ENST00000488171 SLC25A42Q86VD7 318 aa14.68□□□□□ -0.06
CD55-209ENST00000488171 SGPP2Q8IWX5 399 aa14.68□□□□□ -0.06
CD55-209ENST00000488171 ZMAT4Q9H898 229 aa14.68□□□□□ -0.06
CD55-209ENST00000488171 SLC2A9Q9NRM0 540 aa14.68□□□□□ -0.06
CD55-209ENST00000488171 DMRT1Q9Y5R6 373 aa14.68□□□□□ -0.06
CD55-209ENST00000488171 HRASP01112 189 aa14.67□□□□□ -0.06
CD55-209ENST00000488171 KIR2DS2P43631 304 aa14.67□□□□□ -0.06
CD55-209ENST00000488171 LCN12Q6JVE5 192 aa14.67□□□□□ -0.06
CD55-209ENST00000488171 ADAMTSL5Q6ZMM2 481 aa14.67□□□□□ -0.06
CD55-209ENST00000488171 MUC7Q8TAX7 377 aa14.67□□□□□ -0.06
CD55-209ENST00000488171 FYTTD1Q96QD9 318 aaKnown RBP14.67□□□□□ -0.06
CD55-209ENST00000488171 PEMTQ9UBM1 199 aa14.67□□□□□ -0.06
CD55-209ENST00000488171 MEIS3P1A6NDR6 274 aa14.66□□□□□ -0.06
CD55-209ENST00000488171 MYOD1P15172 320 aa14.66□□□□□ -0.06
CD55-209ENST00000488171 AREGP15514 252 aa14.66□□□□□ -0.06
CD55-209ENST00000488171 SPAG16Q8N0X2 631 aa14.66□□□□□ -0.06
CD55-209ENST00000488171 Q8N402 240 aa14.66□□□□□ -0.06
CD55-209ENST00000488171 ZBTB34Q8NCN2 500 aa14.66□□□□□ -0.06
CD55-209ENST00000488171 OR5AP2Q8NGF4 316 aa14.66□□□□□ -0.06
CD55-209ENST00000488171 FANCD2OSQ96PS1 177 aa14.66□□□□□ -0.06
CD55-209ENST00000488171 SLC5A7Q9GZV3 580 aa14.66□□□□□ -0.06
CD55-209ENST00000488171 CGB1A6NKQ9 187 aa14.65□□□□□ -0.06
CD55-209ENST00000488171 PPP5D1E7EU14 171 aa14.65□□□□□ -0.06
CD55-209ENST00000488171 SULT1C2O00338 296 aa14.65□□□□□ -0.06
CD55-209ENST00000488171 RBFOX2O43251 390 aaKnown RBP eCLIP14.65□□□□□ -0.06
CD55-209ENST00000488171 XRCC3O43542 346 aa14.65□□□□□ -0.06
CD55-209ENST00000488171 AIREO43918 545 aa14.65□□□□□ -0.06
CD55-209ENST00000488171 CRYGCP07315 174 aa14.65□□□□□ -0.06
CD55-209ENST00000488171 CBX5P45973 191 aa14.65□□□□□ -0.06
CD55-209ENST00000488171 FXYD4P59646 89 aa14.65□□□□□ -0.06
CD55-209ENST00000488171 RPL8P62917 257 aaKnown RBP14.65□□□□□ -0.06
CD55-209ENST00000488171 TIMM50Q3ZCQ8 353 aa14.65□□□□□ -0.06
CD55-209ENST00000488171 OR4A47Q6IF82 309 aa14.65□□□□□ -0.06
CD55-209ENST00000488171 GIMAP1Q8WWP7 306 aa14.65□□□□□ -0.06
CD55-209ENST00000488171 BET1LQ9NYM9 111 aa14.65□□□□□ -0.06
CD55-209ENST00000488171 FBXL7Q9UJT9 491 aa14.65□□□□□ -0.06
CD55-209ENST00000488171 DPPA5A6NC42 116 aa14.64□□□□□ -0.07
CD55-209ENST00000488171 HLA-GP17693 338 aa14.64□□□□□ -0.07
CD55-209ENST00000488171 PSMB6P28072 239 aa14.64□□□□□ -0.07
CD55-209ENST00000488171 RPS19P39019 145 aaKnown RBP14.64□□□□□ -0.07
CD55-209ENST00000488171 KLK9Q2XQG4 91 aa14.64□□□□□ -0.07
CD55-209ENST00000488171 FAM209BQ5JX69 171 aa14.64□□□□□ -0.07
CD55-209ENST00000488171 ZNF818PQ6ZRF7 136 aa14.64□□□□□ -0.07
CD55-209ENST00000488171 CROCCP3Q8IVE0 287 aa14.64□□□□□ -0.07
CD55-209ENST00000488171 OR2K2Q8NGT1 345 aa14.64□□□□□ -0.07
CD55-209ENST00000488171 OR4A5Q8NH83 315 aa14.64□□□□□ -0.07
CD55-209ENST00000488171 KCTD12Q96CX2 325 aaKnown RBP14.64□□□□□ -0.07
CD55-209ENST00000488171 YIPF6Q96EC8 236 aa14.64□□□□□ -0.07
CD55-209ENST00000488171 KLK9Q9UKQ9 250 aa14.64□□□□□ -0.07
CD55-209ENST00000488171 NDUFB8O95169 186 aa14.63□□□□□ -0.07
CD55-209ENST00000488171 HLA-AP01891 365 aaKnown RBP14.63□□□□□ -0.07
CD55-209ENST00000488171 CTRB1P17538 263 aa14.63□□□□□ -0.07
CD55-209ENST00000488171 POU2AF1Q16633 256 aa14.63□□□□□ -0.07
CD55-209ENST00000488171 UBE2NLQ5JXB2 153 aa14.63□□□□□ -0.07
CD55-209ENST00000488171 CASC10Q5T4H9 136 aa14.63□□□□□ -0.07
CD55-209ENST00000488171 CTRB2Q6GPI1 263 aa14.63□□□□□ -0.07
CD55-209ENST00000488171 GTSCR1Q86UQ5 136 aa14.63□□□□□ -0.07
CD55-209ENST00000488171 S100A16Q96FQ6 103 aaKnown RBP14.63□□□□□ -0.07
CD55-209ENST00000488171 CCDC140Q96MF4 163 aa14.63□□□□□ -0.07
CD55-209ENST00000488171 AIFM2Q9BRQ8 373 aa14.63□□□□□ -0.07
CD55-209ENST00000488171 ANAPC10Q9UM13 185 aa14.63□□□□□ -0.07
CD55-209ENST00000488171 TRAV3A0A0B4J244 114 aa14.62□□□□□ -0.07
CD55-209ENST00000488171 GGCTO75223 188 aaKnown RBP14.62□□□□□ -0.07
CD55-209ENST00000488171 IGHV3-23P01764 117 aa14.62□□□□□ -0.07
CD55-209ENST00000488171 EDN2P20800 178 aa14.62□□□□□ -0.07
CD55-209ENST00000488171 TAS2R31P59538 309 aa14.62□□□□□ -0.07
CD55-209ENST00000488171 LSM3P62310 102 aaKnown RBP14.62□□□□□ -0.07
CD55-209ENST00000488171 CATR1Q13166 79 aa14.62□□□□□ -0.07
CD55-209ENST00000488171 CD300EQ496F6 205 aaPredicted RBP14.62□□□□□ -0.07
CD55-209ENST00000488171 TMEM17Q86X19 198 aa14.62□□□□□ -0.07
CD55-209ENST00000488171 CITED4Q96RK1 184 aa14.62□□□□□ -0.07
CD55-209ENST00000488171 HRASLSQ9HDD0 168 aa14.62□□□□□ -0.07
CD55-209ENST00000488171 IFT46Q9NQC8 304 aa14.62□□□□□ -0.07
CD55-209ENST00000488171 S4R3C0 116 aa14.62□□□□□ -0.07
CD55-209ENST00000488171 OR2C1O95371 312 aa14.61□□□□□ -0.07
CD55-209ENST00000488171 HPRT1P00492 218 aa14.61□□□□□ -0.07
CD55-209ENST00000488171 REG1AP05451 166 aa14.61□□□□□ -0.07
CD55-209ENST00000488171 GNRHRP30968 328 aa14.61□□□□□ -0.07
CD55-209ENST00000488171 OR2B8PP59922 312 aa14.61□□□□□ -0.07
CD55-209ENST00000488171 SAMD12Q8N8I0 201 aa14.61□□□□□ -0.07
CD55-209ENST00000488171 OR51H1Q8NH63 302 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms