RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 AADACL3Q5VUY0 350 aa15.72■□□□□ 0.11
HDAC4-209ENST00000487617 OR51H1Q8NH63 302 aa15.72■□□□□ 0.11
HDAC4-209ENST00000487617 AP3S1Q92572 193 aa15.72■□□□□ 0.11
HDAC4-209ENST00000487617 MOB3AQ96BX8 217 aa15.72■□□□□ 0.11
HDAC4-209ENST00000487617 AIFM2Q9BRQ8 373 aa15.72■□□□□ 0.11
HDAC4-209ENST00000487617 ZNF256Q9Y2P7 627 aaPredicted RBP15.72■□□□□ 0.11
HDAC4-209ENST00000487617 FAM25AB3EWG3 89 aa15.71■□□□□ 0.11
HDAC4-209ENST00000487617 FAM25CB3EWG5 89 aa15.71■□□□□ 0.11
HDAC4-209ENST00000487617 FAM25GB3EWG6 89 aa15.71■□□□□ 0.11
HDAC4-209ENST00000487617 LY86O95711 162 aa15.71■□□□□ 0.11
HDAC4-209ENST00000487617 PRH1P02810 166 aa15.71■□□□□ 0.11
HDAC4-209ENST00000487617 ZP3P21754 424 aa15.71■□□□□ 0.11
HDAC4-209ENST00000487617 GNRHRP30968 328 aa15.71■□□□□ 0.11
HDAC4-209ENST00000487617 HRH1P35367 487 aa15.71■□□□□ 0.11
HDAC4-209ENST00000487617 MAS1LP35410 378 aa15.71■□□□□ 0.11
HDAC4-209ENST00000487617 RPL27AP46776 148 aaKnown RBP15.71■□□□□ 0.11
HDAC4-209ENST00000487617 ACSM6Q6P461 480 aa15.71■□□□□ 0.11
HDAC4-209ENST00000487617 GPR141Q7Z602 305 aa15.71■□□□□ 0.11
HDAC4-209ENST00000487617 LYSMD2Q8IV50 215 aa15.71■□□□□ 0.11
HDAC4-209ENST00000487617 TTC9CQ8N5M4 171 aa15.71■□□□□ 0.11
HDAC4-209ENST00000487617 FYTTD1Q96QD9 318 aaKnown RBP15.71■□□□□ 0.11
HDAC4-209ENST00000487617 SCPEP1Q9HB40 452 aa15.71■□□□□ 0.11
HDAC4-209ENST00000487617 TNCP24821 2201 aa15.71■□□□□ 0.1
HDAC4-209ENST00000487617 HMX3A6NHT5 357 aa15.7■□□□□ 0.1
HDAC4-209ENST00000487617 RBMXL2O75526 392 aaKnown RBP15.7■□□□□ 0.1
HDAC4-209ENST00000487617 ZNF182P17025 639 aaPredicted RBP15.7■□□□□ 0.1
HDAC4-209ENST00000487617 RHOGP84095 191 aa15.7■□□□□ 0.1
HDAC4-209ENST00000487617 CD69Q07108 199 aa15.7■□□□□ 0.1
HDAC4-209ENST00000487617 ZNF343Q6P1L6 599 aa15.7■□□□□ 0.1
HDAC4-209ENST00000487617 SLC25A42Q86VD7 318 aa15.7■□□□□ 0.1
HDAC4-209ENST00000487617 OR6F1Q8NGZ6 308 aa15.7■□□□□ 0.1
HDAC4-209ENST00000487617 CD300LFQ8TDQ1 290 aa15.7■□□□□ 0.1
HDAC4-209ENST00000487617 OR4C12Q96R67 309 aa15.7■□□□□ 0.1
HDAC4-209ENST00000487617 HRASLSQ9HDD0 168 aa15.7■□□□□ 0.1
HDAC4-209ENST00000487617 PEF1Q9UBV8 284 aaKnown RBP15.7■□□□□ 0.1
HDAC4-209ENST00000487617 ADAM30Q9UKF2 790 aa15.7■□□□□ 0.1
HDAC4-209ENST00000487617 FAM223BA6NKX1 122 aa15.69■□□□□ 0.1
HDAC4-209ENST00000487617 TEX22C9J3V5 150 aa15.69■□□□□ 0.1
HDAC4-209ENST00000487617 HPRT1P00492 218 aa15.69■□□□□ 0.1
HDAC4-209ENST00000487617 IL6RP08887 468 aaPredicted RBP15.69■□□□□ 0.1
HDAC4-209ENST00000487617 ALDH3B2P48448 385 aa15.69■□□□□ 0.1
HDAC4-209ENST00000487617 TAS2R31P59538 309 aa15.69■□□□□ 0.1
HDAC4-209ENST00000487617 RPL8P62917 257 aaKnown RBP15.69■□□□□ 0.1
HDAC4-209ENST00000487617 ZNF45Q02386 682 aa15.69■□□□□ 0.1
HDAC4-209ENST00000487617 OR4A47Q6IF82 309 aa15.69■□□□□ 0.1
HDAC4-209ENST00000487617 FAM223AQ8IWN6 122 aa15.69■□□□□ 0.1
HDAC4-209ENST00000487617 OR4A5Q8NH83 315 aa15.69■□□□□ 0.1
HDAC4-209ENST00000487617 B9D2Q9BPU9 175 aa15.69■□□□□ 0.1
HDAC4-209ENST00000487617 ELOVL1Q9BW60 279 aa15.69■□□□□ 0.1
HDAC4-209ENST00000487617 AKIP1Q9NQ31 210 aa15.69■□□□□ 0.1
HDAC4-209ENST00000487617 BET1LQ9NYM9 111 aa15.69■□□□□ 0.1
HDAC4-209ENST00000487617 DPPA5A6NC42 116 aa15.68■□□□□ 0.1
HDAC4-209ENST00000487617 E7EUB6 86 aa15.68■□□□□ 0.1
HDAC4-209ENST00000487617 PGLYRP1O75594 196 aaPredicted RBP15.68■□□□□ 0.1
HDAC4-209ENST00000487617 RLN1P04808 185 aa15.68■□□□□ 0.1
HDAC4-209ENST00000487617 NQO2P16083 231 aa15.68■□□□□ 0.1
HDAC4-209ENST00000487617 HLA-GP17693 338 aa15.68■□□□□ 0.1
HDAC4-209ENST00000487617 RCVRNP35243 200 aa15.68■□□□□ 0.1
HDAC4-209ENST00000487617 TSPAN5P62079 268 aa15.68■□□□□ 0.1
HDAC4-209ENST00000487617 ATP5G2Q06055 141 aa15.68■□□□□ 0.1
HDAC4-209ENST00000487617 FXYD6Q9H0Q3 95 aa15.68■□□□□ 0.1
HDAC4-209ENST00000487617 PLEKHA2Q9HB19 425 aa15.68■□□□□ 0.1
HDAC4-209ENST00000487617 SLC2A9Q9NRM0 540 aa15.68■□□□□ 0.1
HDAC4-209ENST00000487617 ZNF257Q9Y2Q1 563 aa15.68■□□□□ 0.1
HDAC4-209ENST00000487617 LSM4Q9Y4Z0 139 aaKnown RBP15.68■□□□□ 0.1
HDAC4-209ENST00000487617 TRBV9A0A0B4J1U6 114 aa15.67■□□□□ 0.1
HDAC4-209ENST00000487617 S1PR2O95136 353 aa15.67■□□□□ 0.1
HDAC4-209ENST00000487617 TRBV12-3P01733 135 aa15.67■□□□□ 0.1
HDAC4-209ENST00000487617 ZNF735P0CB33 412 aa15.67■□□□□ 0.1
HDAC4-209ENST00000487617 MYOD1P15172 320 aa15.67■□□□□ 0.1
HDAC4-209ENST00000487617 EXOSC2Q13868 293 aaKnown RBP15.67■□□□□ 0.1
HDAC4-209ENST00000487617 KLF5Q13887 457 aaPredicted RBP15.67■□□□□ 0.1
HDAC4-209ENST00000487617 CMTM1Q8IZ96 169 aa15.67■□□□□ 0.1
HDAC4-209ENST00000487617 DMBX1Q8NFW5 382 aa15.67■□□□□ 0.1
HDAC4-209ENST00000487617 OR6Q1Q8NGQ2 317 aa15.67■□□□□ 0.1
HDAC4-209ENST00000487617 A0A1B0GW64 132 aa15.66■□□□□ 0.1
HDAC4-209ENST00000487617 NPIPB5A8MRT5 1133 aa15.66■□□□□ 0.1
HDAC4-209ENST00000487617 GPR31O00270 319 aa15.66■□□□□ 0.1
HDAC4-209ENST00000487617 OR2J3O76001 311 aa15.66■□□□□ 0.1
HDAC4-209ENST00000487617 SPNP16150 400 aa15.66■□□□□ 0.1
HDAC4-209ENST00000487617 POU2AF1Q16633 256 aa15.66■□□□□ 0.1
HDAC4-209ENST00000487617 RNASE12Q5GAN4 147 aaKnown RBP15.66■□□□□ 0.1
HDAC4-209ENST00000487617 NECAP1Q8NC96 275 aa15.66■□□□□ 0.1
HDAC4-209ENST00000487617 RSRP1Q9BUV0 290 aa15.66■□□□□ 0.1
HDAC4-209ENST00000487617 TMEM140Q9NV12 185 aa15.66■□□□□ 0.1
HDAC4-209ENST00000487617 COMMD9Q9P000 198 aa15.66■□□□□ 0.1
HDAC4-209ENST00000487617 EXTL2Q9UBQ6 330 aa15.66■□□□□ 0.1
HDAC4-209ENST00000487617 TRAV3A0A0B4J244 114 aa15.65■□□□□ 0.1
HDAC4-209ENST00000487617 UPK2O00526 184 aa15.65■□□□□ 0.1
HDAC4-209ENST00000487617 AREGP15514 252 aa15.65■□□□□ 0.1
HDAC4-209ENST00000487617 RPA2P15927 270 aa15.65■□□□□ 0.1
HDAC4-209ENST00000487617 F2RP25116 425 aa15.65■□□□□ 0.1
HDAC4-209ENST00000487617 SYNJ2BPP57105 145 aa15.65■□□□□ 0.1
HDAC4-209ENST00000487617 ERVK-16P61578 105 aa15.65■□□□□ 0.1
HDAC4-209ENST00000487617 RPEL1Q2QD12 228 aa15.65■□□□□ 0.1
HDAC4-209ENST00000487617 C19orf35Q6ZS72 473 aa15.65■□□□□ 0.1
HDAC4-209ENST00000487617 PSMB6P28072 239 aa15.64■□□□□ 0.09
HDAC4-209ENST00000487617 LPAR6P43657 344 aa15.64■□□□□ 0.09
HDAC4-209ENST00000487617 SPCS2Q15005 226 aa15.64■□□□□ 0.09
HDAC4-209ENST00000487617 TATDN3Q17R31 274 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms