RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 PRTFDC1Q9NRG1 225 aa4.44□□□□□ -1.7
SF1-217ENST00000486960 RPS6KB2Q9UBS0 482 aa4.44□□□□□ -1.7
SF1-217ENST00000486960 NAT8BQ9UHF3 227 aa4.44□□□□□ -1.7
SF1-217ENST00000486960 LAMTOR2Q9Y2Q5 125 aa4.44□□□□□ -1.7
SF1-217ENST00000486960 NUP210LQ5VU65 1888 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 A0A087WUU8 490 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 FAM236DA0A1B0GTK5 79 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 B4DXG7 233 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 ZNF814B7Z6K7 855 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 KRBOX1C9JBD0 128 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 I3L521 148 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 TRMUO75648 421 aaKnown RBP4.43□□□□□ -1.7
SF1-217ENST00000486960 ARL6IP5O75915 188 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 KBTBD11O94819 623 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 OPN1SWP03999 348 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 OR4A8P0C604 315 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 OR9G9P0C7N8 305 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 FAM236CP0DP71 79 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 SLC2A2P11168 524 aaPredicted RBP4.43□□□□□ -1.7
SF1-217ENST00000486960 PSG2P11465 335 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 CXCL2P19875 107 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 AZU1P20160 251 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 MYL9P24844 172 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 AMTP48728 403 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 RAB5CP51148 216 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 H2BFSP57053 126 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 RPL24P83731 157 aaKnown RBP4.43□□□□□ -1.7
SF1-217ENST00000486960 CST6Q15828 149 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 BEAN1Q3B7T3 259 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 NCMAPQ5T1S8 102 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 ZNF324BQ6AW86 544 aaPredicted RBP4.43□□□□□ -1.7
SF1-217ENST00000486960 ZNF620Q6ZNG0 422 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 C20orf196Q8IYI0 205 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 LYG1Q8N1E2 194 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 FTMTQ8N4E7 242 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 OR13C8Q8NGS7 320 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 OR5W2Q8NH69 310 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 OR1L1Q8NH94 360 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 SRSF12Q8WXF0 261 aaKnown RBP4.43□□□□□ -1.7
SF1-217ENST00000486960 MALSU1Q96EH3 234 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 SLC25A33Q9BSK2 321 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 NDFIP1Q9BT67 221 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 TM2D1Q9BX74 207 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 RNASE7Q9H1E1 156 aaKnown RBP4.43□□□□□ -1.7
SF1-217ENST00000486960 IFI27L2Q9H2X8 130 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 CACYBPQ9HB71 228 aaKnown RBP4.43□□□□□ -1.7
SF1-217ENST00000486960 HES4Q9HCC6 221 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 UQCC1Q9NVA1 299 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 TMEM45AQ9NWC5 275 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 MED11Q9P086 117 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 MCTS1Q9ULC4 181 aaKnown RBP4.43□□□□□ -1.7
SF1-217ENST00000486960 OR2W1Q9Y3N9 320 aa4.43□□□□□ -1.7
SF1-217ENST00000486960 TRAV30A0A087WSZ9 112 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 TRAV8-2A0A0B4J237 113 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 TRAV38-1A0A0B4J264 116 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 GAGE12JA6NER3 117 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 ZNF724A8MTY0 619 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 LINC01619G3V211 115 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 H7C417 338 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 OR1I1O60431 355 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 SCO1O75880 301 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 TOMM40O96008 361 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 SOD1P00441 154 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 LALBAP00709 142 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 NRASP01111 189 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 CELA2AP08217 269 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 MMP7P09237 267 aaPredicted RBP4.42□□□□□ -1.7
SF1-217ENST00000486960 MED14OSP0DP75 135 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 RPL7P18124 248 aaKnown RBP4.42□□□□□ -1.7
SF1-217ENST00000486960 BLVRBP30043 206 aaPredicted RBP4.42□□□□□ -1.7
SF1-217ENST00000486960 SRIP30626 198 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 G6PCP35575 357 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 GABRA2P47869 451 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 SPINT3P49223 89 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 COPZ1P61923 177 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 HIST1H1AQ02539 215 aaPredicted RBP4.42□□□□□ -1.7
SF1-217ENST00000486960 ZNF763Q0D2J5 394 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 PRDX4Q13162 271 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 C1DQ13901 141 aaKnown RBP4.42□□□□□ -1.7
SF1-217ENST00000486960 KIAA1109Q2LD37 5005 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 ZNF260Q3ZCT1 412 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 TMEM207Q6UWW9 146 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 Q6ZN92 141 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 ZNF550Q7Z398 422 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 TCTEX1D1Q8N7M0 179 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 OR2G3Q8NGZ4 309 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 VN1R17PQ8TDU5 208 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 ZNF418Q8TF45 676 aaPredicted RBP4.42□□□□□ -1.7
SF1-217ENST00000486960 PCNPQ8WW12 178 aaKnown RBP4.42□□□□□ -1.7
SF1-217ENST00000486960 KLK6Q92876 244 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 TMEM54Q969K7 222 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 HIST1H2BAQ96A08 127 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 GPR146Q96CH1 333 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 PLEKHB2Q96CS7 222 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 MBD6Q96DN6 1003 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 ATOH8Q96SQ7 321 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 SCN2AQ99250 2005 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 ZNF471Q9BX82 626 aaPredicted RBP4.42□□□□□ -1.7
SF1-217ENST00000486960 CHST6Q9GZX3 395 aa4.42□□□□□ -1.7
SF1-217ENST00000486960 Q9H521 79 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms