RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 FAM216AQ8WUB2 273 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 ZCCHC14Q8WYQ9 949 aaKnown RBP10.33□□□□□ -0.76
HSPG2-211ENST00000486901 UHRF2Q96PU4 802 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 MS4A5Q9H3V2 200 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 ELOVL5Q9NYP7 299 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 IGHV3OR15-7A0A075B7D8 119 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 MGST1P10620 155 aaKnown RBP10.33□□□□□ -0.76
HSPG2-211ENST00000486901 OR10J1P30954 320 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 C1orf194Q5T5A4 169 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 OR10G8Q8NGN5 311 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 CT55Q8WUE5 264 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 VAMP8Q9BV40 100 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 SSBP3Q9BWW4 388 aaPredicted RBP10.33□□□□□ -0.76
HSPG2-211ENST00000486901 GNG12Q9UBI6 72 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 HSPB7Q9UBY9 170 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 AHRRA9YTQ3 701 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 J3QT63 122 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 LHX2P50458 406 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 PSG7Q13046 419 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 FAM201AQ5SY85 155 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 TMEM164Q5U3C3 297 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 LCN12Q6JVE5 192 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 OR4P4Q8NGL7 312 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 TECTBQ96PL2 329 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 RIMS4Q9H426 269 aaPredicted RBP10.32□□□□□ -0.76
HSPG2-211ENST00000486901 TMEM106BQ9NUM4 274 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 PXMP4Q9Y6I8 212 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 KIAA1549Q9HCM3 1950 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 FAM90A10PA6NDY2 464 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 FAM90A18PA6NE21 464 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 FAM90A16PA6NEW6 464 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 FAM90A20PA6NIJ5 464 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 FAM90A8PA6NJQ4 464 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 FAM90A7PA6NKC0 464 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 FAM90A22PA8MWA6 464 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 FAM90A12PA8MX19 464 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 FAM90A5PA8MXJ8 464 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 FAM90A23PA8MXZ1 464 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 K7ESF4 209 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 FAM90A15PP0C7V4 464 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 FAM90A13PP0C7W8 464 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 FAM90A14PP0C7W9 464 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 FAM90A24PP0C7X0 464 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 LINC00310P59036 64 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 MLANAQ16655 118 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 Q6ZS49 121 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 WDR54Q9H977 334 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 NAT8BQ9UHF3 227 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.32□□□□□ -0.767e-7■□□□□ 8.4
HSPG2-211ENST00000486901 NAV3Q8IVL0 2385 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 DOPEY2Q9Y3R5 2298 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 C15orf62A8K5M9 175 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 PMS2P5A8MQ11 134 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.32□□□□□ -0.76
HSPG2-211ENST00000486901 K7EN84 100 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 CGAP01215 116 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 RPLP1P05386 114 aaKnown RBP10.32□□□□□ -0.76
HSPG2-211ENST00000486901 CLDN18P56856 261 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 SOX8P57073 446 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 RNPS1Q15287 305 aaKnown RBP10.32□□□□□ -0.76
HSPG2-211ENST00000486901 ABHD17BQ5VST6 288 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 OR2M7Q8NG81 312 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 R3HDM4Q96D70 268 aa10.32□□□□□ -0.76
HSPG2-211ENST00000486901 M0R1X1 148 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 AMTP48728 403 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 TMEM251Q8N6I4 163 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 CNEP1R1Q8N9A8 125 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 BEND2Q8NDZ0 799 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 Q8NFD4 153 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 RCHY1Q96PM5 261 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 ADAMTS20P59510 1910 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 DYSFO75923 2080 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 CCKARP32238 428 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 IL11RAQ14626 422 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 OR1C1Q15619 314 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 AGMATQ9BSE5 352 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 RTL8AQ9BWD3 113 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 ZNRD1Q9P1U0 126 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 FBXL7Q9UJT9 491 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 PAX1P15863 534 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 HTD2P86397 168 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 COA6Q5JTJ3 125 aaKnown RBP10.31□□□□□ -0.76
HSPG2-211ENST00000486901 C11orf42Q8N5U0 333 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 ZNF645Q8N7E2 425 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 RBM14Q96PK6 669 aaKnown RBP10.31□□□□□ -0.76
HSPG2-211ENST00000486901 TTTY12Q9BZ98 90 aa10.31□□□□□ -0.76
HSPG2-211ENST00000486901 RAB4AP20338 218 aa10.3□□□□□ -0.76
HSPG2-211ENST00000486901 CRYBB3P26998 211 aa10.3□□□□□ -0.76
HSPG2-211ENST00000486901 SRP14P37108 136 aaKnown RBP10.3□□□□□ -0.76
HSPG2-211ENST00000486901 OR5AU1Q8NGC0 362 aa10.3□□□□□ -0.76
HSPG2-211ENST00000486901 ST6GALNAC6Q969X2 333 aa10.3□□□□□ -0.76
HSPG2-211ENST00000486901 LINC00479Q96M42 142 aa10.3□□□□□ -0.76
HSPG2-211ENST00000486901 LPAR2Q9HBW0 351 aa10.3□□□□□ -0.76
HSPG2-211ENST00000486901 FOXJ2Q9P0K8 574 aa10.3□□□□□ -0.76
HSPG2-211ENST00000486901 BOKQ9UMX3 212 aaPredicted RBP10.3□□□□□ -0.76
HSPG2-211ENST00000486901 SVEP1Q4LDE5 3571 aa10.3□□□□□ -0.76
HSPG2-211ENST00000486901 DLEU1O43261 78 aa10.3□□□□□ -0.76
HSPG2-211ENST00000486901 CD24P25063 80 aa10.3□□□□□ -0.76
HSPG2-211ENST00000486901 PCP4P48539 62 aa10.3□□□□□ -0.76
HSPG2-211ENST00000486901 CATR1Q13166 79 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms