RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 RBPMSQ93062 196 aaKnown RBP10.15□□□□□ -0.78
HDAC6-229ENST00000486665 IL22RA2Q969J5 263 aa10.15□□□□□ -0.78
HDAC6-229ENST00000486665 GPR146Q96CH1 333 aa10.15□□□□□ -0.78
HDAC6-229ENST00000486665 RHOVQ96L33 236 aa10.15□□□□□ -0.78
HDAC6-229ENST00000486665 METTL1Q9UBP6 276 aaKnown RBP10.15□□□□□ -0.78
HDAC6-229ENST00000486665 TGP01266 2768 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 A0A0B4J2A0 478 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 TMEM89A2RUT3 159 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 C7orf66A4D0T2 115 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 MARCH11A6NNE9 402 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 SNRPGP15A8MWD9 76 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 CLDN34H7C241 214 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 GPR137BO60478 399 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 OR2A4O95047 310 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 HOXB5P09067 269 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 OR9G9P0C7N8 305 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 BLCAPP62952 87 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 UBA52P62987 128 aaKnown RBP10.14□□□□□ -0.79
HDAC6-229ENST00000486665 PJVKQ0ZLH3 352 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 C5orf64Q2M2E5 130 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 C2orf68Q2NKX9 166 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 VMA21Q3ZAQ7 101 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 Q6ZRM9 215 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 C12orf45Q8N5I9 185 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-229ENST00000486665 FAM71E2Q8N5Q1 922 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 SLC35G3Q8N808 338 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 C5orf56Q8N8D9 126 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 TEX45Q8NA69 505 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 UXS1Q8NBZ7 420 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 DMBX1Q8NFW5 382 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 COQ8AQ8NI60 647 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 TAF15Q92804 592 aaKnown RBP eCLIP10.14□□□□□ -0.79
HDAC6-229ENST00000486665 OR2A7Q96R45 310 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 CLCC1Q96S66 551 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 OR51J1Q9H342 316 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 GPN1Q9HCN4 374 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-229ENST00000486665 TMEM140Q9NV12 185 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 C1RLQ9NZP8 487 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 KIAA1456Q9P272 454 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 SHPKQ9UHJ6 478 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 SIGLEC9Q9Y336 463 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 MOB4Q9Y3A3 225 aa10.14□□□□□ -0.79
HDAC6-229ENST00000486665 DBX1A6NMT0 343 aa10.13□□□□□ -0.79
HDAC6-229ENST00000486665 UPK2O00526 184 aa10.13□□□□□ -0.79
HDAC6-229ENST00000486665 CREBL2O60519 120 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-229ENST00000486665 ADAP1O75689 374 aa10.13□□□□□ -0.79
HDAC6-229ENST00000486665 SPDEFO95238 335 aa10.13□□□□□ -0.79
HDAC6-229ENST00000486665 RNASE1P07998 156 aaKnown RBP10.13□□□□□ -0.79
HDAC6-229ENST00000486665 MYOD1P15172 320 aa10.13□□□□□ -0.79
HDAC6-229ENST00000486665 ERVK-16P61578 105 aa10.13□□□□□ -0.79
HDAC6-229ENST00000486665 SRPXP78539 464 aa10.13□□□□□ -0.79
HDAC6-229ENST00000486665 Q6ZNX1 250 aa10.13□□□□□ -0.79
HDAC6-229ENST00000486665 Q6ZS46 218 aa10.13□□□□□ -0.79
HDAC6-229ENST00000486665 C16orf82Q7Z2V1 217 aa10.13□□□□□ -0.79
HDAC6-229ENST00000486665 TMEM167AQ8TBQ9 72 aa10.13□□□□□ -0.79
HDAC6-229ENST00000486665 PHB2Q99623 299 aa10.13□□□□□ -0.79
HDAC6-229ENST00000486665 RASL11BQ9BPW5 248 aa10.13□□□□□ -0.79
HDAC6-229ENST00000486665 AIFM2Q9BRQ8 373 aa10.13□□□□□ -0.79
HDAC6-229ENST00000486665 RANBP3Q9H6Z4 567 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-229ENST00000486665 BET1LQ9NYM9 111 aa10.13□□□□□ -0.79
HDAC6-229ENST00000486665 NSG2Q9Y328 171 aa10.13□□□□□ -0.79
HDAC6-229ENST00000486665 MMP24Q9Y5R2 645 aa10.13□□□□□ -0.79
HDAC6-229ENST00000486665 FAM181BA6NEQ2 426 aa10.12□□□□□ -0.79
HDAC6-229ENST00000486665 LINC01548A6NM66 108 aa10.12□□□□□ -0.79
HDAC6-229ENST00000486665 FGF16O43320 207 aa10.12□□□□□ -0.79
HDAC6-229ENST00000486665 KBTBD11O94819 623 aa10.12□□□□□ -0.79
HDAC6-229ENST00000486665 AKR1C2P52895 323 aa10.12□□□□□ -0.79
HDAC6-229ENST00000486665 SSBP2P81877 361 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-229ENST00000486665 PLGLAQ15195 96 aa10.12□□□□□ -0.79
HDAC6-229ENST00000486665 PRSS8Q16651 343 aa10.12□□□□□ -0.79
HDAC6-229ENST00000486665 NMSQ5H8A3 153 aa10.12□□□□□ -0.79
HDAC6-229ENST00000486665 GGNBP1Q5YKI7 109 aa10.12□□□□□ -0.79
HDAC6-229ENST00000486665 H2BFWTQ7Z2G1 175 aa10.12□□□□□ -0.79
HDAC6-229ENST00000486665 PPP1R27Q86WC6 154 aa10.12□□□□□ -0.79
HDAC6-229ENST00000486665 CADM3Q8N126 398 aa10.12□□□□□ -0.79
HDAC6-229ENST00000486665 C3orf56Q8N813 242 aa10.12□□□□□ -0.79
HDAC6-229ENST00000486665 LSM10Q969L4 123 aaKnown RBP10.12□□□□□ -0.79
HDAC6-229ENST00000486665 RRNAD1Q96FB5 475 aaKnown RBP10.12□□□□□ -0.79
HDAC6-229ENST00000486665 JMJD8Q96S16 334 aa10.12□□□□□ -0.79
HDAC6-229ENST00000486665 ZNF430Q9H8G1 570 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-229ENST00000486665 DUXBA0A1W2PPF3 345 aa10.11□□□□□ -0.79
HDAC6-229ENST00000486665 MPTX1A8MV57 137 aa10.11□□□□□ -0.79
HDAC6-229ENST00000486665 CCSO14618 274 aa10.11□□□□□ -0.79
HDAC6-229ENST00000486665 ATG12O94817 140 aa10.11□□□□□ -0.79
HDAC6-229ENST00000486665 CA2P00918 260 aa10.11□□□□□ -0.79
HDAC6-229ENST00000486665 VDAC1P21796 283 aa10.11□□□□□ -0.79
HDAC6-229ENST00000486665 RELBQ01201 579 aa10.11□□□□□ -0.79
HDAC6-229ENST00000486665 OR4A5Q8NH83 315 aa10.11□□□□□ -0.79
HDAC6-229ENST00000486665 RNASE11Q8TAA1 199 aaKnown RBP10.11□□□□□ -0.79
HDAC6-229ENST00000486665 VSTM2AQ8TAG5 236 aa10.11□□□□□ -0.79
HDAC6-229ENST00000486665 HSPB9Q9BQS6 159 aa10.11□□□□□ -0.79
HDAC6-229ENST00000486665 RAB18Q9NP72 206 aa10.11□□□□□ -0.79
HDAC6-229ENST00000486665 IGHV7-81A0A0B4J1V7 117 aa10.1□□□□□ -0.79
HDAC6-229ENST00000486665 E7EUB6 86 aa10.1□□□□□ -0.79
HDAC6-229ENST00000486665 M0QZK8 103 aa10.1□□□□□ -0.79
HDAC6-229ENST00000486665 SSNA1O43805 119 aa10.1□□□□□ -0.79
HDAC6-229ENST00000486665 HLA-DRB1P01911 266 aa10.1□□□□□ -0.79
HDAC6-229ENST00000486665 OR2B8PP59922 312 aa10.1□□□□□ -0.79
HDAC6-229ENST00000486665 GNB1P62873 340 aa10.1□□□□□ -0.79
HDAC6-229ENST00000486665 CX3CL1P78423 397 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms