RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ENDOGQ14249 297 aaKnown RBP5.47□□□□□ -1.53
HDAC3-209ENST00000486618 FAM201AQ5SY85 155 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 SLC35E4Q6ICL7 350 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 OR2T2Q6IF00 324 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 STEAP1BQ6NZ63 245 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 FBXW12Q6X9E4 464 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 FOXL2NBQ6ZUU3 175 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 FA2HQ7L5A8 372 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 C16orf82Q7Z2V1 217 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 BAP18Q8IXM2 172 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 OR10AD1Q8NGE0 317 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 OR10G9Q8NGN4 311 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 GNPDA2Q8TDQ7 276 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 SNAPC3Q92966 411 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 URM1Q9BTM9 101 aaKnown RBP5.47□□□□□ -1.53
HDAC3-209ENST00000486618 FAM234AQ9H0X4 552 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 DCSTAMPQ9H295 470 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 C5orf66Q9H5L9 145 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 RERGLQ9H628 205 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 MEPEQ9NQ76 525 aaPredicted RBP5.47□□□□□ -1.53
HDAC3-209ENST00000486618 TMEM100Q9NV29 134 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 AURKAIP1Q9NWT8 199 aaPredicted RBP5.47□□□□□ -1.53
HDAC3-209ENST00000486618 METTL1Q9UBP6 276 aaKnown RBP5.47□□□□□ -1.53
HDAC3-209ENST00000486618 NSG2Q9Y328 171 aa5.47□□□□□ -1.53
HDAC3-209ENST00000486618 TRBV4-1A0A0J9YWV2 114 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 IGHV3-64DA0A0J9YX35 117 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 IQCF6A8MYZ5 107 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 MYL12AP19105 171 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 PYCR1P32322 319 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 VHLP40337 213 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 KIR2DS4P43632 304 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 RAB5BP61020 215 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 RPL27P61353 136 aaKnown RBP5.46□□□□□ -1.54
HDAC3-209ENST00000486618 GINS1Q14691 196 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 FCN2Q15485 313 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 LRRC75BQ2VPJ9 315 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 CD300EQ496F6 205 aaPredicted RBP5.46□□□□□ -1.54
HDAC3-209ENST00000486618 OCIAD2Q56VL3 154 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 ALG10Q5BKT4 473 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 CLEC12AQ5QGZ9 265 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 TMEM78Q5T7P6 136 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 AWAT2Q6E213 333 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 EPGNQ6UW88 154 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 UNQ9370/PRO34162Q6UXP9 181 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 OR11H4Q8NGC9 324 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 OR4D11Q8NGI4 311 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 SLC7A13Q8TCU3 470 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 ORAOV1Q8WV07 137 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 TOMM40LQ969M1 308 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 APOBEC3DQ96AK3 386 aaPredicted RBP5.46□□□□□ -1.54
HDAC3-209ENST00000486618 GALMQ96C23 342 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 ZNF488Q96MN9 340 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 OR52B2Q96RD2 323 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 POLR2J2Q9GZM3 115 aaKnown RBP5.46□□□□□ -1.54
HDAC3-209ENST00000486618 POLR2J3Q9H1A7 115 aaKnown RBP5.46□□□□□ -1.54
HDAC3-209ENST00000486618 Q9H8V8 135 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 FGF20Q9NP95 211 aaPredicted RBP5.46□□□□□ -1.54
HDAC3-209ENST00000486618 DOK5Q9P104 306 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 ZNRD1Q9P1U0 126 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 RNF7Q9UBF6 113 aa5.46□□□□□ -1.54
HDAC3-209ENST00000486618 NOP16Q9Y3C1 178 aaKnown RBP5.46□□□□□ -1.54
HDAC3-209ENST00000486618 TRAV38-1A0A0B4J264 116 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 MLNRO43193 412 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 FAM20BO75063 409 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 CD37P11049 281 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 NKX2-1P43699 371 aaPredicted RBP5.45□□□□□ -1.54
HDAC3-209ENST00000486618 RAB5CP51148 216 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 SLC18A1P54219 525 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 CD164Q04900 197 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 PMVKQ15126 192 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 OR8B8Q15620 311 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 NEDD8Q15843 81 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 HLA-DRB5Q30154 266 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 FFAR4Q5NUL3 377 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 GGNBP1Q5YKI7 109 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 TEX261Q6UWH6 196 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 ZNF782Q6ZMW2 699 aaPredicted RBP5.45□□□□□ -1.54
HDAC3-209ENST00000486618 ASRGL1Q7L266 308 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 MSRB3Q8IXL7 192 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 PDZD9Q8IXQ8 264 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 CMTM4Q8IZR5 234 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 C10orf111Q8N326 155 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 MS4A15Q8N5U1 240 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 UBAC2Q8NBM4 344 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 OR4F17Q8NGA8 305 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 OR4C13Q8NGP0 309 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 OR1B1Q8NGR6 318 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 OR2T6Q8NHC8 308 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 CANT1Q8WVQ1 401 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 ACOT12Q8WYK0 555 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 ADTRPQ96IZ2 230 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 OR4F4Q96R69 305 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 GPER1Q99527 375 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 P2RX4Q99571 388 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 PRSS27Q9BQR3 290 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 SULT4A1Q9BR01 284 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 BTBD10Q9BSF8 475 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 ABCG5Q9H222 651 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 CTSZQ9UBR2 303 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 TP53TG1Q9Y2A0 90 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms