RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 KCNE3Q9Y6H6 103 aa3.31□□□□□ -1.88
R3HDM1-217ENST00000486532 PLA2R1Q13018 1463 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 NEO1Q92859 1461 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 RTEL1-TNFRSF6BF6WH68 1400 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 LOC102724200A0A096LPH7 203 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 IGHV1-69-2A0A0G2JMI3 117 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 A0A1B0GW64 132 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 TCRBV3S1A0A5B6 114 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 C7orf71A4D174 169 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 ZNF850A8MQ14 1090 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 FNDC10F2Z333 226 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 NDUFS7O75251 213 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 DEDDO75618 318 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 TNFSF13O75888 250 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 WISP2O76076 250 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 DUS4LO95620 317 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 CXorf1O96002 111 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 IGKV5-2P06315 115 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 LINC00271P0C7V0 271 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 SMIM10L2AP0DMW4 78 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 SMIM10L2BP0DMW5 78 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 GZMBP10144 247 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 NFYBP25208 207 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 ZNF93P35789 620 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 SNCAP37840 140 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 SLC25A1P53007 311 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 AQP4P55087 323 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 CRADDP78560 199 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 HES1Q14469 280 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 TMEM187Q14656 261 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 TMEM183BQ1AE95 376 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 ZNF506Q5JVG8 444 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 TMEM244Q5VVB8 128 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 SPATA31B1PQ5VZV4 182 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 MRPL54Q6P161 138 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 C19orf48Q6RUI8 117 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 Q6ZRU5 148 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 LRRTM1Q86UE6 522 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 ZNF440Q8IYI8 595 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 HIST3H2BBQ8N257 126 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 SLC25A45Q8N413 288 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 FTMTQ8N4E7 242 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 KCNRGQ8N5I3 272 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 ZFP62Q8NB50 900 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 RTN4IP1Q8WWV3 396 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 COPS9Q8WXC6 57 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 TAF15Q92804 592 aaKnown RBP eCLIP3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 SLC25A46Q96AG3 418 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 TEX37Q96LM6 180 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 CIB3Q96Q77 187 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 VAMP8Q9BV40 100 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 GNB1LQ9BYB4 327 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 IMUPQ9GZP8 106 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 POLR2J3Q9H1A7 115 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 DUSP21Q9H596 190 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 EXOSC3Q9NQT5 275 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 ZNF331Q9NQX6 463 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 RIMS3Q9UJD0 308 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 FUT9Q9Y231 359 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 ZNF257Q9Y2Q1 563 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 MRPS16Q9Y3D3 137 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 INSIG2Q9Y5U4 225 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 NUP210LQ5VU65 1888 aa3.3□□□□□ -1.88
R3HDM1-217ENST00000486532 REREQ9P2R6 1566 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 SLIT3O75094 1523 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 A2ML1A8K2U0 1454 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 USP6P35125 1406 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 IGLV3-22A0A075B6J6 115 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 LOC101059948A0A1B0GTJ6 334 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 LOC100130705A0A1B0GUX0 176 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 TRDV1A0A1B0GX56 115 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 C5orf63A6NC05 138 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 CD300LBA8K4G0 201 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 FAM220BPB1ANY3 271 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 ZNF670-ZNF695F2Z2N8 137 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 M0R233 179 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 ISLRO14498 428 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 PDCD6O75340 191 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 CDK2AP2O75956 126 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 KRASP01116 189 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 CTSDP07339 412 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 PRSS1P07477 247 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 SPINK8P0C7L1 97 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 IGLC6P0CF74 106 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 CFC1BP0CG36 223 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 CFC1P0CG37 223 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 ZNF728P0DKX0 622 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 LINC00694P0DN24 101 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 CTLA4P16410 223 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 MYCNOSP40205 109 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 RPS27AP62979 156 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 KLRD1Q13241 179 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 EIF3IQ13347 325 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 ENDOGQ14249 297 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 MSMO1Q15800 293 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 GSG1Q2KHT4 349 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 MEIG1Q5JSS6 88 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 SLC25A30Q5SVS4 291 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 FAM120AOSQ5T036 256 aa3.29□□□□□ -1.88
R3HDM1-217ENST00000486532 AMTNQ6UX39 209 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms