RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 OR51H1Q8NH63 302 aa14.1□□□□□ -0.15
CLDN11-206ENST00000486429 GPX8Q8TED1 209 aa14.1□□□□□ -0.15
CLDN11-206ENST00000486429 USMG5Q96IX5 58 aa14.1□□□□□ -0.15
CLDN11-206ENST00000486429 ZNF2Q9BSG1 426 aaPredicted RBP14.1□□□□□ -0.15
CLDN11-206ENST00000486429 ZNF256Q9Y2P7 627 aaPredicted RBP14.1□□□□□ -0.15
CLDN11-206ENST00000486429 ANKRD34BA5PLL1 514 aa14.09□□□□□ -0.15
CLDN11-206ENST00000486429 HRH1P35367 487 aa14.09□□□□□ -0.15
CLDN11-206ENST00000486429 MAS1LP35410 378 aa14.09□□□□□ -0.15
CLDN11-206ENST00000486429 RPL27AP46776 148 aaKnown RBP14.09□□□□□ -0.15
CLDN11-206ENST00000486429 DHRS11Q6UWP2 260 aa14.09□□□□□ -0.15
CLDN11-206ENST00000486429 GPR141Q7Z602 305 aa14.09□□□□□ -0.15
CLDN11-206ENST00000486429 AIFM2Q9BRQ8 373 aa14.09□□□□□ -0.15
CLDN11-206ENST00000486429 FXYD6Q9H0Q3 95 aa14.09□□□□□ -0.15
CLDN11-206ENST00000486429 FAM223BA6NKX1 122 aa14.08□□□□□ -0.16
CLDN11-206ENST00000486429 FAM25AB3EWG3 89 aa14.08□□□□□ -0.16
CLDN11-206ENST00000486429 FAM25CB3EWG5 89 aa14.08□□□□□ -0.16
CLDN11-206ENST00000486429 FAM25GB3EWG6 89 aa14.08□□□□□ -0.16
CLDN11-206ENST00000486429 LY86O95711 162 aa14.08□□□□□ -0.16
CLDN11-206ENST00000486429 ZNF182P17025 639 aaPredicted RBP14.08□□□□□ -0.16
CLDN11-206ENST00000486429 HLA-DMAP28067 261 aa14.08□□□□□ -0.16
CLDN11-206ENST00000486429 GNRHRP30968 328 aa14.08□□□□□ -0.16
CLDN11-206ENST00000486429 RCVRNP35243 200 aa14.08□□□□□ -0.16
CLDN11-206ENST00000486429 TAS2R31P59538 309 aa14.08□□□□□ -0.16
CLDN11-206ENST00000486429 RHOGP84095 191 aa14.08□□□□□ -0.16
CLDN11-206ENST00000486429 OR4A47Q6IF82 309 aa14.08□□□□□ -0.16
CLDN11-206ENST00000486429 ACSM6Q6P461 480 aa14.08□□□□□ -0.16
CLDN11-206ENST00000486429 SLC25A42Q86VD7 318 aa14.08□□□□□ -0.16
CLDN11-206ENST00000486429 FAM223AQ8IWN6 122 aa14.08□□□□□ -0.16
CLDN11-206ENST00000486429 OR4A5Q8NH83 315 aa14.08□□□□□ -0.16
CLDN11-206ENST00000486429 BET1LQ9NYM9 111 aa14.08□□□□□ -0.16
CLDN11-206ENST00000486429 ADAM30Q9UKF2 790 aa14.08□□□□□ -0.16
CLDN11-206ENST00000486429 DPPA5A6NC42 116 aa14.07□□□□□ -0.16
CLDN11-206ENST00000486429 TEX22C9J3V5 150 aa14.07□□□□□ -0.16
CLDN11-206ENST00000486429 HPRT1P00492 218 aa14.07□□□□□ -0.16
CLDN11-206ENST00000486429 PRH1P02810 166 aa14.07□□□□□ -0.16
CLDN11-206ENST00000486429 RLN1P04808 185 aa14.07□□□□□ -0.16
CLDN11-206ENST00000486429 NQO2P16083 231 aa14.07□□□□□ -0.16
CLDN11-206ENST00000486429 ALDH3B2P48448 385 aa14.07□□□□□ -0.16
CLDN11-206ENST00000486429 RPL8P62917 257 aaKnown RBP14.07□□□□□ -0.16
CLDN11-206ENST00000486429 CD69Q07108 199 aa14.07□□□□□ -0.16
CLDN11-206ENST00000486429 ZNF343Q6P1L6 599 aa14.07□□□□□ -0.16
CLDN11-206ENST00000486429 TTC9CQ8N5M4 171 aa14.07□□□□□ -0.16
CLDN11-206ENST00000486429 OR6F1Q8NGZ6 308 aa14.07□□□□□ -0.16
CLDN11-206ENST00000486429 CD300LFQ8TDQ1 290 aa14.07□□□□□ -0.16
CLDN11-206ENST00000486429 FYTTD1Q96QD9 318 aaKnown RBP14.07□□□□□ -0.16
CLDN11-206ENST00000486429 OR4C12Q96R67 309 aa14.07□□□□□ -0.16
CLDN11-206ENST00000486429 B9D2Q9BPU9 175 aa14.07□□□□□ -0.16
CLDN11-206ENST00000486429 HRASLSQ9HDD0 168 aa14.07□□□□□ -0.16
CLDN11-206ENST00000486429 COMMD9Q9P000 198 aa14.07□□□□□ -0.16
CLDN11-206ENST00000486429 PEF1Q9UBV8 284 aaKnown RBP14.07□□□□□ -0.16
CLDN11-206ENST00000486429 ZNF257Q9Y2Q1 563 aa14.07□□□□□ -0.16
CLDN11-206ENST00000486429 HMX3A6NHT5 357 aa14.06□□□□□ -0.16
CLDN11-206ENST00000486429 RBMXL2O75526 392 aaKnown RBP14.06□□□□□ -0.16
CLDN11-206ENST00000486429 S1PR2O95136 353 aa14.06□□□□□ -0.16
CLDN11-206ENST00000486429 HLA-GP17693 338 aa14.06□□□□□ -0.16
CLDN11-206ENST00000486429 ZNF45Q02386 682 aa14.06□□□□□ -0.16
CLDN11-206ENST00000486429 EXOSC2Q13868 293 aaKnown RBP14.06□□□□□ -0.16
CLDN11-206ENST00000486429 POU2AF1Q16633 256 aa14.06□□□□□ -0.16
CLDN11-206ENST00000486429 LYSMD2Q8IV50 215 aa14.06□□□□□ -0.16
CLDN11-206ENST00000486429 CMTM1Q8IZ96 169 aa14.06□□□□□ -0.16
CLDN11-206ENST00000486429 OR6Q1Q8NGQ2 317 aa14.06□□□□□ -0.16
CLDN11-206ENST00000486429 ELOVL1Q9BW60 279 aa14.06□□□□□ -0.16
CLDN11-206ENST00000486429 PLEKHA2Q9HB19 425 aa14.06□□□□□ -0.16
CLDN11-206ENST00000486429 AKIP1Q9NQ31 210 aa14.06□□□□□ -0.16
CLDN11-206ENST00000486429 NPIPB5A8MRT5 1133 aa14.05□□□□□ -0.16
CLDN11-206ENST00000486429 TRBV12-3P01733 135 aa14.05□□□□□ -0.16
CLDN11-206ENST00000486429 IL6RP08887 468 aaPredicted RBP14.05□□□□□ -0.16
CLDN11-206ENST00000486429 ZNF735P0CB33 412 aa14.05□□□□□ -0.16
CLDN11-206ENST00000486429 TSPAN5P62079 268 aa14.05□□□□□ -0.16
CLDN11-206ENST00000486429 NECAP1Q8NC96 275 aa14.05□□□□□ -0.16
CLDN11-206ENST00000486429 SLC2A9Q9NRM0 540 aa14.05□□□□□ -0.16
CLDN11-206ENST00000486429 EXTL2Q9UBQ6 330 aa14.05□□□□□ -0.16
CLDN11-206ENST00000486429 TRBV9A0A0B4J1U6 114 aa14.04□□□□□ -0.16
CLDN11-206ENST00000486429 GPR31O00270 319 aa14.04□□□□□ -0.16
CLDN11-206ENST00000486429 PGLYRP1O75594 196 aaPredicted RBP14.04□□□□□ -0.16
CLDN11-206ENST00000486429 OR2J3O76001 311 aa14.04□□□□□ -0.16
CLDN11-206ENST00000486429 MYOD1P15172 320 aa14.04□□□□□ -0.16
CLDN11-206ENST00000486429 F2RP25116 425 aa14.04□□□□□ -0.16
CLDN11-206ENST00000486429 ERVK-16P61578 105 aa14.04□□□□□ -0.16
CLDN11-206ENST00000486429 ATP5G2Q06055 141 aa14.04□□□□□ -0.16
CLDN11-206ENST00000486429 RNASE12Q5GAN4 147 aaKnown RBP14.04□□□□□ -0.16
CLDN11-206ENST00000486429 DMBX1Q8NFW5 382 aa14.04□□□□□ -0.16
CLDN11-206ENST00000486429 RSRP1Q9BUV0 290 aa14.04□□□□□ -0.16
CLDN11-206ENST00000486429 TMEM140Q9NV12 185 aa14.04□□□□□ -0.16
CLDN11-206ENST00000486429 LSM4Q9Y4Z0 139 aaKnown RBP14.04□□□□□ -0.16
CLDN11-206ENST00000486429 A0A1B0GW64 132 aa14.03□□□□□ -0.16
CLDN11-206ENST00000486429 E7EUB6 86 aa14.03□□□□□ -0.16
CLDN11-206ENST00000486429 DHFRP00374 187 aa14.03□□□□□ -0.16
CLDN11-206ENST00000486429 AREGP15514 252 aa14.03□□□□□ -0.16
CLDN11-206ENST00000486429 SYNJ2BPP57105 145 aa14.03□□□□□ -0.16
CLDN11-206ENST00000486429 KLF5Q13887 457 aaPredicted RBP14.03□□□□□ -0.16
CLDN11-206ENST00000486429 RPEL1Q2QD12 228 aa14.03□□□□□ -0.16
CLDN11-206ENST00000486429 C19orf35Q6ZS72 473 aa14.03□□□□□ -0.16
CLDN11-206ENST00000486429 CLVS1Q8IUQ0 354 aaPredicted RBP14.03□□□□□ -0.16
CLDN11-206ENST00000486429 COMMD5Q9GZQ3 224 aa14.03□□□□□ -0.16
CLDN11-206ENST00000486429 COL7A1Q02388 2944 aa14.02□□□□□ -0.16
CLDN11-206ENST00000486429 UPK2O00526 184 aa14.02□□□□□ -0.17
CLDN11-206ENST00000486429 RPA2P15927 270 aa14.02□□□□□ -0.17
CLDN11-206ENST00000486429 SPNP16150 400 aa14.02□□□□□ -0.17
CLDN11-206ENST00000486429 PSMB6P28072 239 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms