RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 HPRT1P00492 218 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 FAM157CP0CG43 387 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 ZNRF1Q8ND25 227 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 COL25A1Q9BXS0 654 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-228ENST00000486227 SLC45A2Q9UMX9 530 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 U3KQA8 63 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 PLXNA2O75051 1894 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 MPDZO75970 2070 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 J3QR06 171 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 ORM2P19652 201 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 CCL1P22362 96 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 CD40P25942 277 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 SSTR5P35346 364 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 SELENOHQ8IZQ5 122 aaKnown RBP9.34□□□□□ -0.91
HDAC6-228ENST00000486227 E9PLN8 166 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 FOXH1O75593 365 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 KBTBD11O94819 623 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 RNASEKQ6P5S7 137 aaKnown RBP9.34□□□□□ -0.91
HDAC6-228ENST00000486227 ZNF645Q8N7E2 425 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 ZNF738Q8NE65 137 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 NABP1Q96AH0 204 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 VKORC1Q9BQB6 163 aa9.34□□□□□ -0.91
HDAC6-228ENST00000486227 SNURFLB1AK76 121 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 CD99P14209 185 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 GPX4P36969 197 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-228ENST00000486227 CYB5R2Q6BCY4 276 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 GTF2H5Q6ZYL4 71 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 TP53RKQ96S44 253 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 FER1L5A0AVI2 2057 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 IGHV3-72A0A0B4J1Y9 119 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 IGHV2OR16-5A0A0B4J2B6 119 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 WISP1O95388 367 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 PYY3Q5JQD4 70 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 PET117Q6UWS5 81 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 GCSAMQ8N6F7 178 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 OR4F17Q8NGA8 305 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 HERPUD1Q15011 391 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 JOSD1Q15040 202 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-228ENST00000486227 FAM201AQ5SY85 155 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 RBM14Q96PK6 669 aaKnown RBP9.33□□□□□ -0.92
HDAC6-228ENST00000486227 DCAF16Q9NXF7 216 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 C5orf63A6NC05 138 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 TMEM250H0YL14 139 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 GNG7O60262 68 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 CRYGSP22914 178 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 IER3P46695 156 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 OR1L8Q8NGR8 309 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 ATG101Q9BSB4 218 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 WDR61Q9GZS3 305 aaKnown RBP9.33□□□□□ -0.92
HDAC6-228ENST00000486227 HILPDAQ9Y5L2 63 aa9.33□□□□□ -0.92
HDAC6-228ENST00000486227 IGKV3D-15A0A087WSY6 115 aa9.32□□□□□ -0.92
HDAC6-228ENST00000486227 IGSF23A1L1A6 192 aa9.32□□□□□ -0.92
HDAC6-228ENST00000486227 FAM106CPP0CH98 169 aa9.32□□□□□ -0.92
HDAC6-228ENST00000486227 SRSF6Q13247 344 aaKnown RBP9.32□□□□□ -0.92
HDAC6-228ENST00000486227 HIST3H2BBQ8N257 126 aa9.32□□□□□ -0.92
HDAC6-228ENST00000486227 DRAM1Q8N682 238 aa9.32□□□□□ -0.92
HDAC6-228ENST00000486227 UQCR10Q9UDW1 63 aa9.32□□□□□ -0.92
HDAC6-228ENST00000486227 BLNKQ8WV28 456 aa9.32□□□□□ -0.92
HDAC6-228ENST00000486227 ZNF524Q96C55 264 aa9.32□□□□□ -0.92
HDAC6-228ENST00000486227 TXNDC17Q9BRA2 123 aa9.32□□□□□ -0.92
HDAC6-228ENST00000486227 TMEM208Q9BTX3 173 aa9.32□□□□□ -0.92
HDAC6-228ENST00000486227 PPIAL4CA0A0B4J2A2 164 aa9.32□□□□□ -0.92
HDAC6-228ENST00000486227 SMAD7O15105 426 aaKnown RBP9.32□□□□□ -0.92
HDAC6-228ENST00000486227 PPIAL4GP0DN37 164 aa9.32□□□□□ -0.92
HDAC6-228ENST00000486227 NEU4Q8WWR8 484 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-228ENST00000486227 TAF15Q92804 592 aaKnown RBP eCLIP9.32□□□□□ -0.92
HDAC6-228ENST00000486227 PSMG3Q9BT73 122 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-228ENST00000486227 RBKSQ9H477 322 aa9.32□□□□□ -0.92
HDAC6-228ENST00000486227 AURKAIP1Q9NWT8 199 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-228ENST00000486227 TMEM8BA6NDV4 472 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 MT-ND6P03923 174 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 USF1P22415 310 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-228ENST00000486227 ARF6P62330 175 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 ECSCRQ19T08 205 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 CYP2G1PQ6ZSU1 146 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 SNRNP40Q96DI7 357 aaKnown RBP9.31□□□□□ -0.92
HDAC6-228ENST00000486227 PERPQ96FX8 193 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 RPRMQ9NS64 109 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 OR51B2Q9Y5P1 312 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 LOC105371242A0A075B767 164 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 BSPH1Q075Z2 132 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 OR4P4Q8NGL7 312 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 C12orf77C9JDV5 145 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 SS18L1O75177 396 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-228ENST00000486227 MC5RP33032 325 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 SLC35B1P78383 322 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 FAM166AQ6J272 317 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 ACP7Q6ZNF0 438 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 CLDND2Q8NHS1 167 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 HEATR1Q9H583 2144 aaKnown RBP9.31□□□□□ -0.92
HDAC6-228ENST00000486227 A0A0A6YYD4 124 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 PROB1E7EW31 1015 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 K7ERU9 68 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 M0R2Z0 102 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 S1PR2O95136 353 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 S100A4P26447 101 aaKnown RBP9.31□□□□□ -0.92
HDAC6-228ENST00000486227 LYZP61626 148 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 ZNF788Q6ZQV5 615 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 HIST1H2BLQ99880 126 aa9.31□□□□□ -0.92
HDAC6-228ENST00000486227 PARLQ9H300 379 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms