RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 HABP2Q14520 560 aaPredicted RBP7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 Q3ZCU0 254 aa7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 NMSQ5H8A3 153 aa7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 LDLRAD2Q5SZI1 272 aa7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 EIF5AL1Q6IS14 154 aaKnown RBP7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 OR8H3Q8N146 312 aa7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 PRR18Q8N4B5 295 aa7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 DRAM1Q8N682 238 aa7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 OR4D5Q8NGN0 318 aa7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 OR8U1Q8NH10 309 aa7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 OR1S1Q8NH92 325 aa7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 LHFPL5Q8TAF8 219 aa7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 PIFOQ8TCI5 191 aa7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 SSX3Q99909 188 aa7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 SLC25A32Q9H2D1 315 aa7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 MED9Q9NWA0 146 aa7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 TAS2R3Q9NYW6 316 aa7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 CACFD1Q9UGQ2 172 aa7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 TET2Q6N021 2002 aaPredicted RBP7.56□□□□□ -1.2
TMEM39A-208ENST00000486159 TRAV39A0A0B4J263 110 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 KBTBD11-OT1A0A1B0GTJ5 212 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 CHST1O43916 411 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 IGLV2-14P01704 120 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 MBPP02686 304 aaPredicted RBP7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 GAPDHP04406 335 aaKnown RBP7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 TPT1P13693 172 aaKnown RBP7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 COX7A1P24310 79 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 KIR2DS2P43631 304 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 NKX2-1P43699 371 aaPredicted RBP7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 UBE2E1P51965 193 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 ARHGDIBP52566 201 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 EDDM3AQ14507 147 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 ZNF273Q14593 569 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 Q6ZS46 218 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 LHFPL4Q7Z7J7 247 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 OR52L2PQ8NGH6 319 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 ST8SIA2Q92186 375 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 ZNF471Q9BX82 626 aaPredicted RBP7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 COA4Q9NYJ1 87 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 CALYQ9NYX4 217 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 OR5AC2Q9NZP5 309 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 GNG12Q9UBI6 72 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 LINC00312Q9Y6C7 94 aa7.55□□□□□ -1.2
TMEM39A-208ENST00000486159 KIAA2026Q5HYC2 2103 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 FAM90A26D6RGX4 464 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 M0R1W7 72 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 RBFOX2O43251 390 aaKnown RBP eCLIP7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 JTBO76095 146 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 LY86O95711 162 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 CFDP00746 253 aaPredicted RBP7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 CD33P20138 364 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 RPL12P30050 165 aaKnown RBP7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 SSTR5P35346 364 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 EDDM3BP56851 147 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 LOXL3P58215 753 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 RPL15P61313 204 aaKnown RBP7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 ID3Q02535 119 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 EIF4EBP1Q13541 118 aaPredicted RBP7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 MORN2Q502X0 79 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 TMEM200BQ69YZ2 307 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 C5orf24Q7Z6I8 188 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 BAP18Q8IXM2 172 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 SLC7A5P1Q8MH63 180 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 BEND2Q8NDZ0 799 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 OR51H1Q8NH63 302 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 RRNAD1Q96FB5 475 aaKnown RBP7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 ADTRPQ96IZ2 230 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 RAB40CQ96S21 281 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 SLC25A31Q9H0C2 315 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 OR2D2Q9H210 308 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 GAL3ST2Q9H3Q3 398 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 ZC4H2Q9NQZ6 224 aa7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 LSM5Q9Y4Y9 91 aaKnown RBP7.54□□□□□ -1.2
TMEM39A-208ENST00000486159 BORCS7-ASMTA0A0B4J1R7 106 aa7.53□□□□□ -1.2
TMEM39A-208ENST00000486159 RPS10-NUDT3A0A1W2PQS6 291 aa7.53□□□□□ -1.2
TMEM39A-208ENST00000486159 FAM90A9PA6NNJ1 464 aa7.53□□□□□ -1.2
TMEM39A-208ENST00000486159 TNFSF12O43508 249 aa7.53□□□□□ -1.2
TMEM39A-208ENST00000486159 PITX3O75364 302 aa7.53□□□□□ -1.2
TMEM39A-208ENST00000486159 SCAF4O95104 1147 aaKnown RBP7.53□□□□□ -1.2
TMEM39A-208ENST00000486159 SCGB1D2O95969 90 aa7.53□□□□□ -1.2
TMEM39A-208ENST00000486159 PPP1CCP36873 323 aaKnown RBP7.53□□□□□ -1.2
TMEM39A-208ENST00000486159 GPR12P47775 334 aa7.53□□□□□ -1.2
TMEM39A-208ENST00000486159 VAMP2P63027 116 aa7.53□□□□□ -1.2
TMEM39A-208ENST00000486159 KLHDC1Q8N7A1 406 aa7.53□□□□□ -1.2
TMEM39A-208ENST00000486159 RNASE11Q8TAA1 199 aaKnown RBP7.53□□□□□ -1.2
TMEM39A-208ENST00000486159 AGMATQ9BSE5 352 aa7.53□□□□□ -1.2
TMEM39A-208ENST00000486159 MEGF9Q9H1U4 602 aa7.53□□□□□ -1.2
TMEM39A-208ENST00000486159 GFOD1Q9NXC2 390 aa7.53□□□□□ -1.2
TMEM39A-208ENST00000486159 IDI2-AS1Q9NZ38 188 aa7.53□□□□□ -1.2
TMEM39A-208ENST00000486159 DSCAML1Q8TD84 2053 aa7.53□□□□□ -1.2
TMEM39A-208ENST00000486159 TRBV23-1A0A0A0MS06 115 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 BTBD17A6NE02 478 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 WRBO00258 174 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 MED6O75586 246 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 SPDEFO95238 335 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 CD28P10747 220 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 AKR1C2P52895 323 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 DLX6P56179 175 aa7.52□□□□□ -1.21
TMEM39A-208ENST00000486159 TAS2R30P59541 319 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms