RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 SOSTQ9BQB4 213 aa9.35□□□□□ -0.91
HLA-DOA-204ENST00000485901 FAM103A1Q9BTL3 118 aaKnown RBP9.35□□□□□ -0.91
HLA-DOA-204ENST00000485901 TINAGL1Q9GZM7 467 aaPredicted RBP9.35□□□□□ -0.91
HLA-DOA-204ENST00000485901 FOXA2Q9Y261 457 aaPredicted RBP9.35□□□□□ -0.91
HLA-DOA-204ENST00000485901 GSTZ1O43708 216 aaPredicted RBP9.34□□□□□ -0.91
HLA-DOA-204ENST00000485901 RAMP3O60896 148 aa9.34□□□□□ -0.91
HLA-DOA-204ENST00000485901 RAB3DO95716 219 aa9.34□□□□□ -0.91
HLA-DOA-204ENST00000485901 TAS2R31P59538 309 aa9.34□□□□□ -0.91
HLA-DOA-204ENST00000485901 MEF2DQ14814 521 aa9.34□□□□□ -0.91
HLA-DOA-204ENST00000485901 C19orf54Q5BKX5 351 aa9.34□□□□□ -0.91
HLA-DOA-204ENST00000485901 STEAP1BQ6NZ63 245 aa9.34□□□□□ -0.91
HLA-DOA-204ENST00000485901 LCNL1Q6ZST4 164 aa9.34□□□□□ -0.91
HLA-DOA-204ENST00000485901 MMD2Q8IY49 270 aa9.34□□□□□ -0.91
HLA-DOA-204ENST00000485901 SLC38A6Q8IZM9 456 aa9.34□□□□□ -0.91
HLA-DOA-204ENST00000485901 VKORC1L1Q8N0U8 176 aa9.34□□□□□ -0.91
HLA-DOA-204ENST00000485901 RHOVQ96L33 236 aa9.34□□□□□ -0.91
HLA-DOA-204ENST00000485901 UBE2E2Q96LR5 201 aa9.34□□□□□ -0.91
HLA-DOA-204ENST00000485901 RSRP1Q9BUV0 290 aa9.34□□□□□ -0.91
HLA-DOA-204ENST00000485901 FXYD6Q9H0Q3 95 aa9.34□□□□□ -0.91
HLA-DOA-204ENST00000485901 KLK15Q9H2R5 256 aa9.34□□□□□ -0.91
HLA-DOA-204ENST00000485901 PLEKHA2Q9HB19 425 aa9.34□□□□□ -0.91
HLA-DOA-204ENST00000485901 WI2-2373I1.2A0A1W2PRP0 233 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 MSGN1A6NI15 193 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 RLN1P04808 185 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 NQO2P16083 231 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 F2RP25116 425 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 MYCNOSP40205 109 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 TNXAQ16473 311 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 MRGPRG-AS1Q2M3A8 158 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 PHLDA2Q53GA4 152 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 C18orf65Q6ZTR6 163 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 C8orf86Q6ZUL3 223 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 LHFPL1Q86WI0 220 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 PUSL1Q8N0Z8 303 aaKnown RBP9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 LINC00482Q8N8I6 264 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 ZNF491Q8N8L2 437 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 OR4A5Q8NH83 315 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 TERB2Q8NHR7 220 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 TMEM167AQ8TBQ9 72 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 MYOZ3Q8TDC0 251 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 PHB2Q99623 299 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 ZNF430Q9H8G1 570 aaPredicted RBP9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 VSIG4Q9Y279 399 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 STAB2Q8WWQ8 2551 aa9.33□□□□□ -0.92
HLA-DOA-204ENST00000485901 SORL1Q92673 2214 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 DPPA5A6NC42 116 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 DISC1C4P0D8 188 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 CCL24O00175 119 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 SOX15O60248 233 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 KBTBD11O94819 623 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 AKAIN1P0CW23 69 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 PGAM2P15259 253 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 MAS1LP35410 378 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 KRTAP10-11P60412 298 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 SSBP2P81877 361 aaPredicted RBP9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 KIAA0141Q14154 515 aaPredicted RBP9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 SCGB2B2Q4G0G5 96 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 C11orf87Q6NUJ2 197 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 SSX9Q7RTT3 188 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 OR5T1Q8NG75 326 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 OR4D10Q8NGI6 311 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 ZFAND1Q8TCF1 268 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 C4orf3Q8WVX3 66 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 SRSF12Q8WXF0 261 aaKnown RBP9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 ZNF486Q96H40 463 aaPredicted RBP9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 SPIN2AQ99865 258 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 SPIN2BQ9BPZ2 258 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 THAP7Q9BT49 309 aaPredicted RBP9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 SLA2Q9H6Q3 261 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 HRASLSQ9HDD0 168 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 ZNF355PQ9NSJ1 428 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 FAM212BQ9NTI7 297 aaPredicted RBP9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 BET1LQ9NYM9 111 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 COMMD9Q9P000 198 aa9.32□□□□□ -0.92
HLA-DOA-204ENST00000485901 C3orf84H3BNL1 204 aa9.31□□□□□ -0.92
HLA-DOA-204ENST00000485901 H3BUA1 57 aa9.31□□□□□ -0.92
HLA-DOA-204ENST00000485901 MPPED1O15442 326 aa9.31□□□□□ -0.92
HLA-DOA-204ENST00000485901 PTBP1P26599 531 aaKnown RBP eCLIP9.31□□□□□ -0.92
HLA-DOA-204ENST00000485901 ECI1P42126 302 aa9.31□□□□□ -0.92
HLA-DOA-204ENST00000485901 LPAR6P43657 344 aa9.31□□□□□ -0.92
HLA-DOA-204ENST00000485901 ERVK-16P61578 105 aa9.31□□□□□ -0.92
HLA-DOA-204ENST00000485901 POU2AF1Q16633 256 aa9.31□□□□□ -0.92
HLA-DOA-204ENST00000485901 PYDC2Q56P42 97 aa9.31□□□□□ -0.92
HLA-DOA-204ENST00000485901 OR4A47Q6IF82 309 aa9.31□□□□□ -0.92
HLA-DOA-204ENST00000485901 TBC1D26Q86UD7 250 aa9.31□□□□□ -0.92
HLA-DOA-204ENST00000485901 DMBX1Q8NFW5 382 aa9.31□□□□□ -0.92
HLA-DOA-204ENST00000485901 MS4A10Q96PG2 267 aa9.31□□□□□ -0.92
HLA-DOA-204ENST00000485901 A0A0G2JLM5 398 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 ANKRD20A5PA0PJZ0 165 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 S1PR2O95136 353 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 BRI3O95415 125 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 ZNF735P0CB33 412 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 HLA-GP17693 338 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 TPPP2P59282 170 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 RND3P61587 244 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 RPL8P62917 257 aaKnown RBP9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 RUNX1Q01196 453 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 ZNF585BQ52M93 769 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 SPANXN2Q5MJ10 180 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 ASPHD1Q5U4P2 390 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms