RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 FAM90A26D6RGX4 464 aa16.4■□□□□ 0.22
VCPKMT-203ENST00000484763 ST8SIA3O43173 380 aa16.4■□□□□ 0.22
VCPKMT-203ENST00000484763 SLC25A17O43808 307 aa16.4■□□□□ 0.22
VCPKMT-203ENST00000484763 SNAPC5O75971 98 aa16.4■□□□□ 0.22
VCPKMT-203ENST00000484763 NXPH3O95157 252 aa16.4■□□□□ 0.22
VCPKMT-203ENST00000484763 SPDEFO95238 335 aa16.4■□□□□ 0.22
VCPKMT-203ENST00000484763 FAM106CPP0CH98 169 aa16.4■□□□□ 0.22
VCPKMT-203ENST00000484763 DYNLT3P51808 116 aa16.4■□□□□ 0.22
VCPKMT-203ENST00000484763 OR2B8PP59922 312 aa16.4■□□□□ 0.22
VCPKMT-203ENST00000484763 CXorf66Q5JRM2 361 aaPredicted RBP16.4■□□□□ 0.22
VCPKMT-203ENST00000484763 NOXA1Q86UR1 476 aa16.4■□□□□ 0.22
VCPKMT-203ENST00000484763 THNSL2Q86YJ6 484 aa16.4■□□□□ 0.22
VCPKMT-203ENST00000484763 OR4A5Q8NH83 315 aa16.4■□□□□ 0.22
VCPKMT-203ENST00000484763 THAP6Q8TBB0 222 aa16.4■□□□□ 0.22
VCPKMT-203ENST00000484763 LSM5Q9Y4Y9 91 aaKnown RBP16.4■□□□□ 0.22
VCPKMT-203ENST00000484763 TRAV3A0A0B4J244 114 aa16.39■□□□□ 0.21
VCPKMT-203ENST00000484763 C15orf61A6NNL5 157 aa16.39■□□□□ 0.21
VCPKMT-203ENST00000484763 K7EPK0 472 aa16.39■□□□□ 0.21
VCPKMT-203ENST00000484763 UPK2O00526 184 aa16.39■□□□□ 0.21
VCPKMT-203ENST00000484763 CNTFRP26992 372 aa16.39■□□□□ 0.21
VCPKMT-203ENST00000484763 ID3Q02535 119 aa16.39■□□□□ 0.21
VCPKMT-203ENST00000484763 C11orf87Q6NUJ2 197 aa16.39■□□□□ 0.21
VCPKMT-203ENST00000484763 FAM71E2Q8N5Q1 922 aa16.39■□□□□ 0.21
VCPKMT-203ENST00000484763 HYLS1Q96M11 299 aa16.39■□□□□ 0.21
VCPKMT-203ENST00000484763 HNF4GQ14541 408 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 PSG5Q15238 335 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 MMDQ15546 238 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 AARDQ4LEZ3 155 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 C9orf139Q6ZV77 190 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 ZNF429Q86V71 674 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 TEX45Q8NA69 505 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 OR11H4Q8NGC9 324 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 TMEM167AQ8TBQ9 72 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 MBD2Q9UBB5 411 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 PRNDQ9UKY0 176 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 SOX21Q9Y651 276 aaPredicted RBP16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 WRBO00258 174 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 DEDDO75618 318 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 RLN2P04090 185 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 TMEM11P17152 192 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 FAM120AOSQ5T036 256 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 PRSS54Q6PEW0 395 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 Q8N6K4 173 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 QTRT1Q9BXR0 403 aaKnown RBP16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 HSPB7Q9UBY9 170 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 CACFD1Q9UGQ2 172 aa16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 FOXA2Q9Y261 457 aaPredicted RBP16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 RCL1Q9Y2P8 373 aaKnown RBP16.38■□□□□ 0.21
VCPKMT-203ENST00000484763 FXYD6-FXYD2A0A087WZ82 144 aa16.37■□□□□ 0.21
VCPKMT-203ENST00000484763 H0YIZ8 118 aa16.37■□□□□ 0.21
VCPKMT-203ENST00000484763 NBR2O15453 112 aa16.37■□□□□ 0.21
VCPKMT-203ENST00000484763 SLC25A4P12235 298 aa16.37■□□□□ 0.21
VCPKMT-203ENST00000484763 EIF2B2P49770 351 aaKnown RBP16.37■□□□□ 0.21
VCPKMT-203ENST00000484763 TNFRSF9Q07011 255 aa16.37■□□□□ 0.21
VCPKMT-203ENST00000484763 LRRC75BQ2VPJ9 315 aa16.37■□□□□ 0.21
VCPKMT-203ENST00000484763 FBLN7Q53RD9 439 aa16.37■□□□□ 0.21
VCPKMT-203ENST00000484763 NPBQ8NG41 125 aa16.37■□□□□ 0.21
VCPKMT-203ENST00000484763 MAGT1Q9H0U3 335 aa16.37■□□□□ 0.21
VCPKMT-203ENST00000484763 TMEM14BQ9NUH8 114 aa16.37■□□□□ 0.21
VCPKMT-203ENST00000484763 KIAA1456Q9P272 454 aa16.37■□□□□ 0.21
VCPKMT-203ENST00000484763 METTL1Q9UBP6 276 aaKnown RBP16.37■□□□□ 0.21
VCPKMT-203ENST00000484763 TLN2Q9Y4G6 2542 aa16.37■□□□□ 0.21
VCPKMT-203ENST00000484763 CRYGBP07316 175 aa16.36■□□□□ 0.21
VCPKMT-203ENST00000484763 POLR2GP62487 172 aaKnown RBP eCLIP16.36■□□□□ 0.21
VCPKMT-203ENST00000484763 SPNS3Q6ZMD2 512 aa16.36■□□□□ 0.21
VCPKMT-203ENST00000484763 OR5AC2Q9NZP5 309 aa16.36■□□□□ 0.21
VCPKMT-203ENST00000484763 ACANP16112 2415 aa16.36■□□□□ 0.21
VCPKMT-203ENST00000484763 RRHO14718 337 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 SSSCA1O60232 199 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 NDUFA3O95167 84 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 FGF2P09038 288 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 LYL1P12980 280 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 F2RL1P55085 397 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 RPL8P62917 257 aaKnown RBP16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 AANATQ16613 207 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 OR52E5Q8NH55 327 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 SSX3Q99909 188 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 RNF126Q9BV68 326 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 YAE1D1Q9NRH1 226 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 TPSG1Q9NRR2 321 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 FKBP11Q9NYL4 201 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 SIGLEC9Q9Y336 463 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 SYNGR2O43760 224 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 MED6O75586 246 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 IFNA17P01571 189 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 BCL6BQ8N143 479 aaPredicted RBP16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 DCUN1D4Q92564 292 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 FBXL15Q9H469 300 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 ZNF430Q9H8G1 570 aaPredicted RBP16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 OR51B2Q9Y5P1 312 aa16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 TET2Q6N021 2002 aaPredicted RBP16.35■□□□□ 0.21
VCPKMT-203ENST00000484763 PVALBP20472 110 aaPredicted RBP16.34■□□□□ 0.21
VCPKMT-203ENST00000484763 NKX2-5P52952 324 aaPredicted RBP16.34■□□□□ 0.21
VCPKMT-203ENST00000484763 SPCS3P61009 180 aa16.34■□□□□ 0.21
VCPKMT-203ENST00000484763 PLGLAQ15195 96 aa16.34■□□□□ 0.21
VCPKMT-203ENST00000484763 DEFB112Q30KQ8 113 aa16.34■□□□□ 0.21
VCPKMT-203ENST00000484763 PPP1R27Q86WC6 154 aa16.34■□□□□ 0.21
VCPKMT-203ENST00000484763 MMD2Q8IY49 270 aa16.34■□□□□ 0.21
VCPKMT-203ENST00000484763 OR8H1Q8NGG4 311 aa16.34■□□□□ 0.21
VCPKMT-203ENST00000484763 GRPEL2Q8TAA5 225 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms