RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 CD40LGP29965 261 aa20.78■□□□□ 0.92
SMDT1-203ENST00000484235 KIAA0141Q14154 515 aaPredicted RBP20.78■□□□□ 0.92
SMDT1-203ENST00000484235 C8orf86Q6ZUL3 223 aa20.78■□□□□ 0.92
SMDT1-203ENST00000484235 TMEM167AQ8TBQ9 72 aa20.78■□□□□ 0.92
SMDT1-203ENST00000484235 UBE2E2Q96LR5 201 aa20.78■□□□□ 0.92
SMDT1-203ENST00000484235 MSGN1A6NI15 193 aa20.77■□□□□ 0.92
SMDT1-203ENST00000484235 AKAIN1P0CW23 69 aa20.77■□□□□ 0.92
SMDT1-203ENST00000484235 POU2AF1Q16633 256 aa20.77■□□□□ 0.92
SMDT1-203ENST00000484235 ZNF491Q8N8L2 437 aa20.77■□□□□ 0.92
SMDT1-203ENST00000484235 WFDC9Q8NEX5 89 aa20.77■□□□□ 0.92
SMDT1-203ENST00000484235 ZNF486Q96H40 463 aaPredicted RBP20.77■□□□□ 0.92
SMDT1-203ENST00000484235 PTBP1P26599 531 aaKnown RBP eCLIP20.76■□□□□ 0.91
SMDT1-203ENST00000484235 OR4A47Q6IF82 309 aa20.76■□□□□ 0.91
SMDT1-203ENST00000484235 SSX9Q7RTT3 188 aa20.76■□□□□ 0.91
SMDT1-203ENST00000484235 CCDC190Q86UF4 302 aa20.76■□□□□ 0.91
SMDT1-203ENST00000484235 OR4A5Q8NH83 315 aa20.76■□□□□ 0.91
SMDT1-203ENST00000484235 SRSF12Q8WXF0 261 aaKnown RBP20.76■□□□□ 0.91
SMDT1-203ENST00000484235 THAP7Q9BT49 309 aaPredicted RBP20.76■□□□□ 0.91
SMDT1-203ENST00000484235 FAM212BQ9NTI7 297 aaPredicted RBP20.76■□□□□ 0.91
SMDT1-203ENST00000484235 BET1LQ9NYM9 111 aa20.76■□□□□ 0.91
SMDT1-203ENST00000484235 COMMD9Q9P000 198 aa20.76■□□□□ 0.91
SMDT1-203ENST00000484235 VSIG4Q9Y279 399 aa20.76■□□□□ 0.91
SMDT1-203ENST00000484235 V9GYH0 126 aa20.76■□□□□ 0.91
SMDT1-203ENST00000484235 ANKRD20A5PA0PJZ0 165 aa20.75■□□□□ 0.91
SMDT1-203ENST00000484235 DISC1C4P0D8 188 aa20.75■□□□□ 0.91
SMDT1-203ENST00000484235 ZNF735P0CB33 412 aa20.75■□□□□ 0.91
SMDT1-203ENST00000484235 PGAM2P15259 253 aa20.75■□□□□ 0.91
SMDT1-203ENST00000484235 MAS1LP35410 378 aa20.75■□□□□ 0.91
SMDT1-203ENST00000484235 MYCNOSP40205 109 aa20.75■□□□□ 0.91
SMDT1-203ENST00000484235 SCGB2B2Q4G0G5 96 aa20.75■□□□□ 0.91
SMDT1-203ENST00000484235 PYDC2Q56P42 97 aa20.75■□□□□ 0.91
SMDT1-203ENST00000484235 TBC1D26Q86UD7 250 aa20.75■□□□□ 0.91
SMDT1-203ENST00000484235 OR5T1Q8NG75 326 aa20.75■□□□□ 0.91
SMDT1-203ENST00000484235 C4orf3Q8WVX3 66 aa20.75■□□□□ 0.91
SMDT1-203ENST00000484235 PHB2Q99623 299 aa20.75■□□□□ 0.91
SMDT1-203ENST00000484235 SPIN2AQ99865 258 aa20.75■□□□□ 0.91
SMDT1-203ENST00000484235 SPIN2BQ9BPZ2 258 aa20.75■□□□□ 0.91
SMDT1-203ENST00000484235 SLC2A9Q9NRM0 540 aa20.75■□□□□ 0.91
SMDT1-203ENST00000484235 S1PR2O95136 353 aa20.74■□□□□ 0.91
SMDT1-203ENST00000484235 LPAR6P43657 344 aa20.74■□□□□ 0.91
SMDT1-203ENST00000484235 ZNF585BQ52M93 769 aa20.74■□□□□ 0.91
SMDT1-203ENST00000484235 ASPHD1Q5U4P2 390 aa20.74■□□□□ 0.91
SMDT1-203ENST00000484235 FOXB2Q5VYV0 432 aa20.74■□□□□ 0.91
SMDT1-203ENST00000484235 ETV3LQ6ZN32 361 aa20.74■□□□□ 0.91
SMDT1-203ENST00000484235 ZFAND1Q8TCF1 268 aa20.74■□□□□ 0.91
SMDT1-203ENST00000484235 SLA2Q9H6Q3 261 aa20.74■□□□□ 0.91
SMDT1-203ENST00000484235 HRASLSQ9HDD0 168 aa20.74■□□□□ 0.91
SMDT1-203ENST00000484235 H3BUA1 57 aa20.73■□□□□ 0.91
SMDT1-203ENST00000484235 MPPED1O15442 326 aa20.73■□□□□ 0.91
SMDT1-203ENST00000484235 IL6RP08887 468 aaPredicted RBP20.73■□□□□ 0.91
SMDT1-203ENST00000484235 ETV6P41212 452 aa20.73■□□□□ 0.91
SMDT1-203ENST00000484235 RND3P61587 244 aa20.73■□□□□ 0.91
SMDT1-203ENST00000484235 RPL8P62917 257 aaKnown RBP20.73■□□□□ 0.91
SMDT1-203ENST00000484235 SPANXN2Q5MJ10 180 aa20.73■□□□□ 0.91
SMDT1-203ENST00000484235 FAAP20Q6NZ36 180 aa20.73■□□□□ 0.91
SMDT1-203ENST00000484235 DMBX1Q8NFW5 382 aa20.73■□□□□ 0.91
SMDT1-203ENST00000484235 OR4C16Q8NGL9 310 aa20.73■□□□□ 0.91
SMDT1-203ENST00000484235 CASTOR1Q8WTX7 329 aa20.73■□□□□ 0.91
SMDT1-203ENST00000484235 MS4A10Q96PG2 267 aa20.73■□□□□ 0.91
SMDT1-203ENST00000484235 CCL24O00175 119 aa20.72■□□□□ 0.91
SMDT1-203ENST00000484235 BRI3O95415 125 aa20.72■□□□□ 0.91
SMDT1-203ENST00000484235 CD33P20138 364 aa20.72■□□□□ 0.91
SMDT1-203ENST00000484235 ECI1P42126 302 aa20.72■□□□□ 0.91
SMDT1-203ENST00000484235 MRPL41Q8IXM3 137 aaKnown RBP20.72■□□□□ 0.91
SMDT1-203ENST00000484235 Q8N402 240 aa20.72■□□□□ 0.91
SMDT1-203ENST00000484235 OR6Q1Q8NGQ2 317 aa20.72■□□□□ 0.91
SMDT1-203ENST00000484235 RAX2Q96IS3 184 aa20.72■□□□□ 0.91
SMDT1-203ENST00000484235 P2RX4Q99571 388 aa20.72■□□□□ 0.91
SMDT1-203ENST00000484235 PRRT1Q99946 306 aa20.72■□□□□ 0.91
SMDT1-203ENST00000484235 PI3P19957 117 aa20.71■□□□□ 0.91
SMDT1-203ENST00000484235 PPP5CP53041 499 aa20.71■□□□□ 0.91
SMDT1-203ENST00000484235 PIGPP57054 158 aa20.71■□□□□ 0.91
SMDT1-203ENST00000484235 ERVK-16P61578 105 aa20.71■□□□□ 0.91
SMDT1-203ENST00000484235 RUNX1Q01196 453 aa20.71■□□□□ 0.91
SMDT1-203ENST00000484235 ZNF79Q15937 498 aa20.71■□□□□ 0.91
SMDT1-203ENST00000484235 CADM3Q8N126 398 aa20.71■□□□□ 0.91
SMDT1-203ENST00000484235 LINC00482Q8N8I6 264 aa20.71■□□□□ 0.91
SMDT1-203ENST00000484235 GNB4Q9HAV0 340 aa20.71■□□□□ 0.91
SMDT1-203ENST00000484235 ZNF355PQ9NSJ1 428 aa20.71■□□□□ 0.91
SMDT1-203ENST00000484235 TMEM140Q9NV12 185 aa20.71■□□□□ 0.91
SMDT1-203ENST00000484235 TNCP24821 2201 aa20.7■□□□□ 0.9
SMDT1-203ENST00000484235 MARCH11A6NNE9 402 aa20.7■□□□□ 0.9
SMDT1-203ENST00000484235 UPK2O00526 184 aa20.7■□□□□ 0.9
SMDT1-203ENST00000484235 KRASP01116 189 aa20.7■□□□□ 0.9
SMDT1-203ENST00000484235 FGF2P09038 288 aa20.7■□□□□ 0.9
SMDT1-203ENST00000484235 APELAP0DMC3 54 aa20.7■□□□□ 0.9
SMDT1-203ENST00000484235 HLA-GP17693 338 aa20.7■□□□□ 0.9
SMDT1-203ENST00000484235 TPPP2P59282 170 aa20.7■□□□□ 0.9
SMDT1-203ENST00000484235 C10orf55Q5SWW7 151 aa20.7■□□□□ 0.9
SMDT1-203ENST00000484235 OR13C8Q8NGS7 320 aa20.7■□□□□ 0.9
SMDT1-203ENST00000484235 MARCH1Q8TCQ1 289 aa20.7■□□□□ 0.9
SMDT1-203ENST00000484235 MRGPRFQ96AM1 343 aa20.7■□□□□ 0.9
SMDT1-203ENST00000484235 I3L521 148 aa20.69■□□□□ 0.9
SMDT1-203ENST00000484235 TRGV3P03979 118 aa20.69■□□□□ 0.9
SMDT1-203ENST00000484235 RPL27AP46776 148 aaKnown RBP20.69■□□□□ 0.9
SMDT1-203ENST00000484235 SURF2Q15527 256 aaPredicted RBP20.69■□□□□ 0.9
SMDT1-203ENST00000484235 DEFB136Q30KP8 78 aa20.69■□□□□ 0.9
SMDT1-203ENST00000484235 OR51S1Q8NGJ8 323 aa20.69■□□□□ 0.9
SMDT1-203ENST00000484235 DUX3Q96PT4 197 aa20.69■□□□□ 0.9
SMDT1-203ENST00000484235 CTSDP07339 412 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms