RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, human

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTFDC1-208	ENST00000484084	LINC00336	Q6ZUF6	198 aa		6.29	□□□□□ -1.4
RTFDC1-208	ENST00000484084	APRG1	Q8IVJ8	170 aa		6.29	□□□□□ -1.4
RTFDC1-208	ENST00000484084	MMD2	Q8IY49	270 aa		6.29	□□□□□ -1.4
RTFDC1-208	ENST00000484084	TMEM217	Q8N7C4	229 aa		6.29	□□□□□ -1.4
RTFDC1-208	ENST00000484084	OR6M1	Q8NGM8	313 aa		6.29	□□□□□ -1.4
RTFDC1-208	ENST00000484084	TMEM167A	Q8TBQ9	72 aa		6.29	□□□□□ -1.4
RTFDC1-208	ENST00000484084	ZNF502	Q8TBZ5	544 aa		6.29	□□□□□ -1.4
RTFDC1-208	ENST00000484084	C2CD4C	Q8TF44	421 aa		6.29	□□□□□ -1.4
RTFDC1-208	ENST00000484084	MAFIP	Q8WZ33	124 aa		6.29	□□□□□ -1.4
RTFDC1-208	ENST00000484084	MARC2	Q969Z3	335 aa		6.29	□□□□□ -1.4
RTFDC1-208	ENST00000484084	CMSS1	Q9BQ75	279 aa	Known RBP	6.29	□□□□□ -1.4
RTFDC1-208	ENST00000484084	C9orf16	Q9BUW7	83 aa		6.29	□□□□□ -1.4
RTFDC1-208	ENST00000484084	OR51E2	Q9H255	320 aa		6.29	□□□□□ -1.4
RTFDC1-208	ENST00000484084	FKBP14	Q9NWM8	211 aa		6.29	□□□□□ -1.4
RTFDC1-208	ENST00000484084	LSM2	Q9Y333	95 aa	Known RBP	6.29	□□□□□ -1.4
RTFDC1-208	ENST00000484084	IRGM	A1A4Y4	181 aa		6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	SLC17A2	O00624	439 aa		6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	KBTBD11	O94819	623 aa		6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	REG1A	P05451	166 aa		6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	UCHL1	P09936	223 aa		6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	GAL	P22466	123 aa		6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	MAPK3	P27361	379 aa	Predicted RBP	6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	ELL	P55199	621 aa	Predicted RBP	6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	CLDN12	P56749	244 aa		6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	TCTA	P57738	103 aa		6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	RBMS2	Q15434	407 aa	Known RBP	6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	RBM48	Q5RL73	367 aa	Known RBP	6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	OR4A47	Q6IF82	309 aa		6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	TMEM91	Q6ZNR0	172 aa		6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	RBPMS2	Q6ZRY4	209 aa	Known RBP	6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	OR5B3	Q8NH48	314 aa		6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	OR10J5	Q8NHC4	309 aa		6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	TMEM190	Q8WZ59	177 aa		6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	EEF1AKMT3	Q96AZ1	226 aa		6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	GALNT14	Q96FL9	552 aa		6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	FBXL17	Q9UF56	701 aa		6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	PSORS1C1	Q9UIG5	152 aa		6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	ELF5	Q9UKW6	265 aa	Predicted RBP	6.28	□□□□□ -1.4
RTFDC1-208	ENST00000484084	TRBV7-1	A0A0A6YYK4	115 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	IGKV1D-13	A0A0B4J2D9	117 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	IGLC7	A0M8Q6	106 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	RAB27B	O00194	218 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	MFNG	O00587	321 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	FCGR3B	O75015	233 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	GIG44	P09565	113 aa	Predicted RBP	6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	RBMY1A1	P0DJD3	496 aa	Known RBP	6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	RBMY1C	P0DJD4	496 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	IGKV1-13	P0DP09	117 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	GPR183	P32249	361 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	ADM	P35318	185 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	MFAP2	P55001	183 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	MED21	Q13503	144 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	RBMY1F	Q15415	496 aa	Known RBP	6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	C2orf76	Q3KRA6	126 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	OR2B11	Q5JQS5	317 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	TTC23	Q5W5X9	447 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084		Q6ZS49	121 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	SSX9	Q7RTT3	188 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	SLC25A42	Q86VD7	318 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084		Q8NAQ8	132 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	ADTRP	Q96IZ2	230 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	OR2A7	Q96R45	310 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	GPHA2	Q96T91	129 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	RARRES2	Q99969	163 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	URM1	Q9BTM9	101 aa	Known RBP	6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	CSTL1	Q9H114	145 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	SMPD3	Q9NY59	655 aa	Predicted RBP	6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	ETV7	Q9Y603	341 aa		6.27	□□□□□ -1.41
RTFDC1-208	ENST00000484084	TRAV3	A0A0B4J244	114 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	TMEM272	A0A1B0GTI8	110 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	PRSS29P	A6NIE9	313 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	IGLL5	B9A064	214 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	XRCC3	O43542	346 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	HLA-DQB1	P01920	261 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	GNAO1	P09471	354 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	RPA2	P15927	270 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	PTBP1	P26599	531 aa	Known RBP eCLIP	6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	RPL27A	P46776	148 aa	Known RBP	6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	OR2B8P	P59922	312 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	TPBG	Q13641	420 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	ARFRP1	Q13795	201 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	HSD17B12	Q53GQ0	312 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	FAM90A2P	Q658T7	463 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	ZFP1	Q6P2D0	407 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	ZNF773	Q6PK81	442 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	ZNF575	Q86XF7	245 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	SLC38A6	Q8IZM9	456 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	PQLC1	Q8N2U9	271 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	MS4A15	Q8N5U1	240 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	OR11H2	Q8NH07	326 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	CD300LF	Q8TDQ1	290 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	CYGB	Q8WWM9	190 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	CHRDL1	Q9BU40	450 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	SCRT1	Q9BWW7	348 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	MFF	Q9GZY8	342 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	S100A14	Q9HCY8	104 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	PLCXD1	Q9NUJ7	323 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	RBMX2	Q9Y388	322 aa	Known RBP	6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	UFC1	Q9Y3C8	167 aa		6.26	□□□□□ -1.41
RTFDC1-208	ENST00000484084	AK6	Q9Y3D8	172 aa	Known RBP	6.26	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms