RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 CLVS1Q8IUQ0 354 aaPredicted RBP12.78□□□□□ -0.36
VAMP4-204ENST00000482519 OR6F1Q8NGZ6 308 aa12.78□□□□□ -0.36
VAMP4-204ENST00000482519 BORCS5Q969J3 196 aa12.78□□□□□ -0.36
VAMP4-204ENST00000482519 FYTTD1Q96QD9 318 aaKnown RBP12.78□□□□□ -0.36
VAMP4-204ENST00000482519 SPIN2AQ99865 258 aa12.78□□□□□ -0.36
VAMP4-204ENST00000482519 SPIN2BQ9BPZ2 258 aa12.78□□□□□ -0.36
VAMP4-204ENST00000482519 TINAGL1Q9GZM7 467 aaPredicted RBP12.78□□□□□ -0.36
VAMP4-204ENST00000482519 SCPEP1Q9HB40 452 aa12.78□□□□□ -0.36
VAMP4-204ENST00000482519 HRASLSQ9HDD0 168 aa12.78□□□□□ -0.36
VAMP4-204ENST00000482519 SAP30O75446 220 aa12.77□□□□□ -0.37
VAMP4-204ENST00000482519 ADAD2Q8NCV1 583 aaKnown RBP12.77□□□□□ -0.37
VAMP4-204ENST00000482519 MOB3AQ96BX8 217 aa12.77□□□□□ -0.37
VAMP4-204ENST00000482519 EXTL2Q9UBQ6 330 aa12.77□□□□□ -0.37
VAMP4-204ENST00000482519 DPPA5A6NC42 116 aa12.76□□□□□ -0.37
VAMP4-204ENST00000482519 HMX3A6NHT5 357 aa12.76□□□□□ -0.37
VAMP4-204ENST00000482519 RGS5O15539 181 aa12.76□□□□□ -0.37
VAMP4-204ENST00000482519 RLN1P04808 185 aa12.76□□□□□ -0.37
VAMP4-204ENST00000482519 RPA2P15927 270 aa12.76□□□□□ -0.37
VAMP4-204ENST00000482519 RCVRNP35243 200 aa12.76□□□□□ -0.37
VAMP4-204ENST00000482519 SPCS2Q15005 226 aa12.76□□□□□ -0.37
VAMP4-204ENST00000482519 OR4A47Q6IF82 309 aa12.76□□□□□ -0.37
VAMP4-204ENST00000482519 PUSL1Q8N0Z8 303 aaKnown RBP12.76□□□□□ -0.37
VAMP4-204ENST00000482519 TMEM167AQ8TBQ9 72 aa12.76□□□□□ -0.37
VAMP4-204ENST00000482519 PRR25Q96S07 402 aa12.76□□□□□ -0.37
VAMP4-204ENST00000482519 AIFM2Q9BRQ8 373 aa12.76□□□□□ -0.37
VAMP4-204ENST00000482519 RANGRFQ9HD47 186 aaPredicted RBP12.76□□□□□ -0.37
VAMP4-204ENST00000482519 RBFOX2O43251 390 aaKnown RBP eCLIP12.75□□□□□ -0.37
VAMP4-204ENST00000482519 PGLYRP1O75594 196 aaPredicted RBP12.75□□□□□ -0.37
VAMP4-204ENST00000482519 LY86O95711 162 aa12.75□□□□□ -0.37
VAMP4-204ENST00000482519 HPRT1P00492 218 aa12.75□□□□□ -0.37
VAMP4-204ENST00000482519 MYOD1P15172 320 aa12.75□□□□□ -0.37
VAMP4-204ENST00000482519 RPL27AP46776 148 aaKnown RBP12.75□□□□□ -0.37
VAMP4-204ENST00000482519 TAS2R31P59538 309 aa12.75□□□□□ -0.37
VAMP4-204ENST00000482519 RPL8P62917 257 aaKnown RBP12.75□□□□□ -0.37
VAMP4-204ENST00000482519 RHOGP84095 191 aa12.75□□□□□ -0.37
VAMP4-204ENST00000482519 CMTM1Q8IZ96 169 aa12.75□□□□□ -0.37
VAMP4-204ENST00000482519 DMBX1Q8NFW5 382 aa12.75□□□□□ -0.37
VAMP4-204ENST00000482519 CD300LFQ8TDQ1 290 aa12.75□□□□□ -0.37
VAMP4-204ENST00000482519 USMG5Q96IX5 58 aa12.75□□□□□ -0.37
VAMP4-204ENST00000482519 FXYD6Q9H0Q3 95 aa12.75□□□□□ -0.37
VAMP4-204ENST00000482519 M0QYG6 137 aa12.74□□□□□ -0.37
VAMP4-204ENST00000482519 GPR31O00270 319 aa12.74□□□□□ -0.37
VAMP4-204ENST00000482519 RBMXL2O75526 392 aaKnown RBP12.74□□□□□ -0.37
VAMP4-204ENST00000482519 S1PR2O95136 353 aa12.74□□□□□ -0.37
VAMP4-204ENST00000482519 IL6RP08887 468 aaPredicted RBP12.74□□□□□ -0.37
VAMP4-204ENST00000482519 NQO2P16083 231 aa12.74□□□□□ -0.37
VAMP4-204ENST00000482519 HLA-GP17693 338 aa12.74□□□□□ -0.37
VAMP4-204ENST00000482519 MAS1LP35410 378 aa12.74□□□□□ -0.37
VAMP4-204ENST00000482519 INSL3P51460 131 aa12.74□□□□□ -0.37
VAMP4-204ENST00000482519 ATP5G2Q06055 141 aa12.74□□□□□ -0.37
VAMP4-204ENST00000482519 PHLDA2Q53GA4 152 aa12.74□□□□□ -0.37
VAMP4-204ENST00000482519 ZNF429Q86V71 674 aa12.74□□□□□ -0.37
VAMP4-204ENST00000482519 TTC9CQ8N5M4 171 aa12.74□□□□□ -0.37
VAMP4-204ENST00000482519 AKIP1Q9NQ31 210 aa12.74□□□□□ -0.37
VAMP4-204ENST00000482519 PEF1Q9UBV8 284 aaKnown RBP12.74□□□□□ -0.37
VAMP4-204ENST00000482519 ADAM30Q9UKF2 790 aa12.74□□□□□ -0.37
VAMP4-204ENST00000482519 TEX22C9J3V5 150 aa12.73□□□□□ -0.37
VAMP4-204ENST00000482519 E7EUB6 86 aa12.73□□□□□ -0.37
VAMP4-204ENST00000482519 BRI3O95415 125 aa12.73□□□□□ -0.37
VAMP4-204ENST00000482519 TRBV12-3P01733 135 aa12.73□□□□□ -0.37
VAMP4-204ENST00000482519 ZP3P21754 424 aa12.73□□□□□ -0.37
VAMP4-204ENST00000482519 ZNF45Q02386 682 aa12.73□□□□□ -0.37
VAMP4-204ENST00000482519 C19orf35Q6ZS72 473 aa12.73□□□□□ -0.37
VAMP4-204ENST00000482519 SLC25A42Q86VD7 318 aa12.73□□□□□ -0.37
VAMP4-204ENST00000482519 OR52I2Q8NH67 350 aa12.73□□□□□ -0.37
VAMP4-204ENST00000482519 OR4A5Q8NH83 315 aa12.73□□□□□ -0.37
VAMP4-204ENST00000482519 RAB2BQ8WUD1 216 aa12.73□□□□□ -0.37
VAMP4-204ENST00000482519 DGCR14Q96DF8 476 aaKnown RBP12.73□□□□□ -0.37
VAMP4-204ENST00000482519 OR4C12Q96R67 309 aa12.73□□□□□ -0.37
VAMP4-204ENST00000482519 RSRP1Q9BUV0 290 aa12.73□□□□□ -0.37
VAMP4-204ENST00000482519 PLEKHA2Q9HB19 425 aa12.73□□□□□ -0.37
VAMP4-204ENST00000482519 TMEM140Q9NV12 185 aa12.73□□□□□ -0.37
VAMP4-204ENST00000482519 BET1LQ9NYM9 111 aa12.73□□□□□ -0.37
VAMP4-204ENST00000482519 KLK11Q9UBX7 282 aa12.73□□□□□ -0.37
VAMP4-204ENST00000482519 ZNF256Q9Y2P7 627 aaPredicted RBP12.73□□□□□ -0.37
VAMP4-204ENST00000482519 TRAV3A0A0B4J244 114 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 FAM223BA6NKX1 122 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 CTDSP2O14595 271 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 NOL3O60936 208 aaKnown RBP12.72□□□□□ -0.37
VAMP4-204ENST00000482519 OR2J3O76001 311 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 IFNA6P05013 189 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 REG1AP05451 166 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 ZNF735P0CB33 412 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 AREGP15514 252 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 F2RP25116 425 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 S100GP29377 79 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 LPAR6P43657 344 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 RPL5P46777 297 aaKnown RBP12.72□□□□□ -0.37
VAMP4-204ENST00000482519 ERVK-16P61578 105 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 LPCAT3Q6P1A2 487 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 ZNF343Q6P1L6 599 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 ACSM6Q6P461 480 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 FAM223AQ8IWN6 122 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 LAX1Q8IWV1 398 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 NECAP1Q8NC96 275 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 FCAMRQ8WWV6 532 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 ABHD1Q96SE0 405 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 ELOVL1Q9BW60 279 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 SLC2A9Q9NRM0 540 aa12.72□□□□□ -0.37
VAMP4-204ENST00000482519 ZNF257Q9Y2Q1 563 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms