RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 NECAP1Q8NC96 275 aa11.58□□□□□ -0.56
LIMS3-203ENST00000480744 OR4S2Q8NH73 311 aa11.58□□□□□ -0.56
LIMS3-203ENST00000480744 DYNLRB2Q8TF09 96 aa11.58□□□□□ -0.56
LIMS3-203ENST00000480744 GAR1Q9NY12 217 aaKnown RBP11.58□□□□□ -0.56
LIMS3-203ENST00000480744 TAS2R8Q9NYW2 309 aa11.58□□□□□ -0.56
LIMS3-203ENST00000480744 SIGLEC8Q9NYZ4 499 aa11.58□□□□□ -0.56
LIMS3-203ENST00000480744 ANXA10Q9UJ72 324 aa11.58□□□□□ -0.56
LIMS3-203ENST00000480744 RYR2Q92736 4967 aa11.57□□□□□ -0.56
LIMS3-203ENST00000480744 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.57□□□□□ -0.56
LIMS3-203ENST00000480744 TRBV9A0A0B4J1U6 114 aa11.57□□□□□ -0.56
LIMS3-203ENST00000480744 PPP5D1E7EU14 171 aa11.57□□□□□ -0.56
LIMS3-203ENST00000480744 KBTBD11O94819 623 aa11.57□□□□□ -0.56
LIMS3-203ENST00000480744 IGLV2-14P01704 120 aa11.57□□□□□ -0.56
LIMS3-203ENST00000480744 ARPC4P59998 168 aa11.57□□□□□ -0.56
LIMS3-203ENST00000480744 C15orf32Q32M92 178 aa11.57□□□□□ -0.56
LIMS3-203ENST00000480744 GPR107Q5VW38 600 aa11.57□□□□□ -0.56
LIMS3-203ENST00000480744 C19orf35Q6ZS72 473 aa11.57□□□□□ -0.56
LIMS3-203ENST00000480744 SLC25A42Q86VD7 318 aa11.57□□□□□ -0.56
LIMS3-203ENST00000480744 VSTM2AQ8TAG5 236 aa11.57□□□□□ -0.56
LIMS3-203ENST00000480744 OR2A7Q96R45 310 aa11.57□□□□□ -0.56
LIMS3-203ENST00000480744 GPHA2Q96T91 129 aa11.57□□□□□ -0.56
LIMS3-203ENST00000480744 HSD17B10Q99714 261 aaKnown RBP11.57□□□□□ -0.56
LIMS3-203ENST00000480744 THAP7Q9BT49 309 aaPredicted RBP11.57□□□□□ -0.56
LIMS3-203ENST00000480744 PLEKHA3Q9HB20 300 aa11.57□□□□□ -0.56
LIMS3-203ENST00000480744 RHBDL2Q9NX52 303 aa11.57□□□□□ -0.56
LIMS3-203ENST00000480744 TENM2Q9NT68 2774 aa11.57□□□□□ -0.56
LIMS3-203ENST00000480744 HLA-AP01891 365 aaKnown RBP11.56□□□□□ -0.56
LIMS3-203ENST00000480744 RPL27AP46776 148 aaKnown RBP11.56□□□□□ -0.56
LIMS3-203ENST00000480744 CD81P60033 236 aa11.56□□□□□ -0.56
LIMS3-203ENST00000480744 SSX9Q7RTT3 188 aa11.56□□□□□ -0.56
LIMS3-203ENST00000480744 MFSD4AQ8N468 514 aa11.56□□□□□ -0.56
LIMS3-203ENST00000480744 SECTM1Q8WVN6 248 aa11.56□□□□□ -0.56
LIMS3-203ENST00000480744 FBXL7Q9UJT9 491 aa11.56□□□□□ -0.56
LIMS3-203ENST00000480744 ZNF257Q9Y2Q1 563 aa11.56□□□□□ -0.56
LIMS3-203ENST00000480744 TRAV18A0A075B6X5 111 aa11.55□□□□□ -0.56
LIMS3-203ENST00000480744 TEX22C9J3V5 150 aa11.55□□□□□ -0.56
LIMS3-203ENST00000480744 TNFSF12O43508 249 aa11.55□□□□□ -0.56
LIMS3-203ENST00000480744 IGHV3-23P01764 117 aa11.55□□□□□ -0.56
LIMS3-203ENST00000480744 IFNA6P05013 189 aa11.55□□□□□ -0.56
LIMS3-203ENST00000480744 PTHLHP12272 177 aa11.55□□□□□ -0.56
LIMS3-203ENST00000480744 CD300EQ496F6 205 aaPredicted RBP11.55□□□□□ -0.56
LIMS3-203ENST00000480744 BEST4Q8NFU0 473 aa11.55□□□□□ -0.56
LIMS3-203ENST00000480744 OR2K2Q8NGT1 345 aa11.55□□□□□ -0.56
LIMS3-203ENST00000480744 TMEM167AQ8TBQ9 72 aa11.55□□□□□ -0.56
LIMS3-203ENST00000480744 SLC25A46Q96AG3 418 aa11.55□□□□□ -0.56
LIMS3-203ENST00000480744 KCTD12Q96CX2 325 aaKnown RBP11.55□□□□□ -0.56
LIMS3-203ENST00000480744 EDA2RQ9HAV5 297 aa11.55□□□□□ -0.56
LIMS3-203ENST00000480744 RETNQ9HD89 108 aa11.55□□□□□ -0.56
LIMS3-203ENST00000480744 S4R3C0 116 aa11.55□□□□□ -0.56
LIMS3-203ENST00000480744 TPPPO94811 219 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 OR2C1O95371 312 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 HRASP01112 189 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 FCER2P06734 321 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 IL6RP08887 468 aaPredicted RBP11.54□□□□□ -0.56
LIMS3-203ENST00000480744 AREGP15514 252 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 EDN2P20800 178 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 FCGR2CP31995 323 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 MAS1LP35410 378 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 MECP2P51608 486 aaKnown RBP11.54□□□□□ -0.56
LIMS3-203ENST00000480744 EIF4EBP1Q13541 118 aaPredicted RBP11.54□□□□□ -0.56
LIMS3-203ENST00000480744 GUCA2BQ16661 112 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 FAM209BQ5JX69 171 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 ADAMTSL5Q6ZMM2 481 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 ZNF66Q6ZN08 573 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 GPR141Q7Z602 305 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 PUSL1Q8N0Z8 303 aaKnown RBP11.54□□□□□ -0.56
LIMS3-203ENST00000480744 GVQW1Q8N7I0 195 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 NEURL2Q9BR09 285 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 CCL28Q9NRJ3 127 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 SLC2A8Q9NY64 477 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 ETV7Q9Y603 341 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 SELENOKQ9Y6D0 94 aa11.54□□□□□ -0.56
LIMS3-203ENST00000480744 NPIPB5A8MRT5 1133 aa11.53□□□□□ -0.56
LIMS3-203ENST00000480744 E7EUB6 86 aa11.53□□□□□ -0.56
LIMS3-203ENST00000480744 GGCTO75223 188 aaKnown RBP11.53□□□□□ -0.56
LIMS3-203ENST00000480744 NDUFB8O95169 186 aa11.53□□□□□ -0.56
LIMS3-203ENST00000480744 REG1AP05451 166 aa11.53□□□□□ -0.56
LIMS3-203ENST00000480744 MYOD1P15172 320 aa11.53□□□□□ -0.56
LIMS3-203ENST00000480744 ARL3P36405 182 aa11.53□□□□□ -0.56
LIMS3-203ENST00000480744 KIR2DS2P43631 304 aa11.53□□□□□ -0.56
LIMS3-203ENST00000480744 SCAND1P57086 179 aa11.53□□□□□ -0.56
LIMS3-203ENST00000480744 BRWD1-AS2P59051 145 aa11.53□□□□□ -0.56
LIMS3-203ENST00000480744 CLEC19AQ6UXS0 136 aa11.53□□□□□ -0.56
LIMS3-203ENST00000480744 HRASLSQ9HDD0 168 aa11.53□□□□□ -0.56
LIMS3-203ENST00000480744 SLC2A9Q9NRM0 540 aa11.53□□□□□ -0.56
LIMS3-203ENST00000480744 CEPT1Q9Y6K0 416 aa11.53□□□□□ -0.56
LIMS3-203ENST00000480744 STARD9Q9P2P6 4700 aa11.52□□□□□ -0.56
LIMS3-203ENST00000480744 SACSQ9NZJ4 4579 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 LCE6AA0A183 80 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 A0A1B0GW64 132 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 C2orf70A6NJV1 201 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 DHFRP00374 187 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 CD7P09564 240 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 ZNF735P0CB33 412 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 DEFA4P12838 97 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 FOLR2P14207 255 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 PSMB6P28072 239 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 FXYD4P59646 89 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 RPL8P62917 257 aaKnown RBP11.52□□□□□ -0.57
LIMS3-203ENST00000480744 DEFB114Q30KQ6 69 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms