RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 REG1AP05451 166 aa7.07□□□□□ -1.28
GPNMB-211ENST00000479625 MYOD1P15172 320 aa7.07□□□□□ -1.28
GPNMB-211ENST00000479625 AREGP15514 252 aa7.07□□□□□ -1.28
GPNMB-211ENST00000479625 INSL4Q14641 139 aa7.07□□□□□ -1.28
GPNMB-211ENST00000479625 CDK10Q15131 360 aa7.07□□□□□ -1.28
GPNMB-211ENST00000479625 OR2B11Q5JQS5 317 aa7.07□□□□□ -1.28
GPNMB-211ENST00000479625 GLT8D1Q68CQ7 371 aa7.07□□□□□ -1.28
GPNMB-211ENST00000479625 MMD2Q8IY49 270 aa7.07□□□□□ -1.28
GPNMB-211ENST00000479625 VKORC1L1Q8N0U8 176 aa7.07□□□□□ -1.28
GPNMB-211ENST00000479625 MARC2Q969Z3 335 aa7.07□□□□□ -1.28
GPNMB-211ENST00000479625 EEF1AKMT3Q96AZ1 226 aa7.07□□□□□ -1.28
GPNMB-211ENST00000479625 FYTTD1Q96QD9 318 aaKnown RBP7.07□□□□□ -1.28
GPNMB-211ENST00000479625 C5orf66Q9H5L9 145 aa7.07□□□□□ -1.28
GPNMB-211ENST00000479625 C12orf4Q9NQ89 552 aa7.07□□□□□ -1.28
GPNMB-211ENST00000479625 MRPL27Q9P0M9 148 aaKnown RBP7.07□□□□□ -1.28
GPNMB-211ENST00000479625 GHRLQ9UBU3 117 aa7.07□□□□□ -1.28
GPNMB-211ENST00000479625 RPL36Q9Y3U8 105 aaKnown RBP7.07□□□□□ -1.28
GPNMB-211ENST00000479625 IGHV3OR16-8A0A075B7F1 116 aa7.06□□□□□ -1.28
GPNMB-211ENST00000479625 DPPA5A6NC42 116 aa7.06□□□□□ -1.28
GPNMB-211ENST00000479625 NPIPB5A8MRT5 1133 aa7.06□□□□□ -1.28
GPNMB-211ENST00000479625 BET1O15155 118 aa7.06□□□□□ -1.28
GPNMB-211ENST00000479625 IL6RP08887 468 aaPredicted RBP7.06□□□□□ -1.28
GPNMB-211ENST00000479625 UBBP0CG47 229 aa7.06□□□□□ -1.28
GPNMB-211ENST00000479625 RPA2P15927 270 aa7.06□□□□□ -1.28
GPNMB-211ENST00000479625 SRMP19623 302 aa7.06□□□□□ -1.28
GPNMB-211ENST00000479625 DUTP33316 252 aaKnown RBP7.06□□□□□ -1.28
GPNMB-211ENST00000479625 QRFPP83859 136 aa7.06□□□□□ -1.28
GPNMB-211ENST00000479625 IGSF11Q5DX21 431 aa7.06□□□□□ -1.28
GPNMB-211ENST00000479625 LCE4AQ5TA78 99 aa7.06□□□□□ -1.28
GPNMB-211ENST00000479625 Q6ZTC4 211 aa7.06□□□□□ -1.28
GPNMB-211ENST00000479625 SLC25A42Q86VD7 318 aa7.06□□□□□ -1.28
GPNMB-211ENST00000479625 OR6M1Q8NGM8 313 aa7.06□□□□□ -1.28
GPNMB-211ENST00000479625 CSTL1Q9H114 145 aa7.06□□□□□ -1.28
GPNMB-211ENST00000479625 LPAR5Q9H1C0 372 aa7.06□□□□□ -1.28
GPNMB-211ENST00000479625 UFC1Q9Y3C8 167 aa7.06□□□□□ -1.28
GPNMB-211ENST00000479625 OR4C46A6NHA9 309 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 FOXI3A8MTJ6 420 aaPredicted RBP7.05□□□□□ -1.28
GPNMB-211ENST00000479625 TMEM14DPA8MWL7 114 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 C11orf94C9JXX5 98 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 ZNF207O43670 478 aaKnown RBP7.05□□□□□ -1.28
GPNMB-211ENST00000479625 CREBL2O60519 120 aaPredicted RBP7.05□□□□□ -1.28
GPNMB-211ENST00000479625 WBP4O75554 376 aaKnown RBP7.05□□□□□ -1.28
GPNMB-211ENST00000479625 CA1P00915 261 aaPredicted RBP7.05□□□□□ -1.28
GPNMB-211ENST00000479625 CLEC3BP05452 202 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 CTSDP07339 412 aaPredicted RBP7.05□□□□□ -1.28
GPNMB-211ENST00000479625 RRASP10301 218 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 RPL27AP46776 148 aaKnown RBP7.05□□□□□ -1.28
GPNMB-211ENST00000479625 C1orf146Q5VVC0 180 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 CBR4Q8N4T8 237 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 Q8NAQ8 132 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 ZNF485Q8NCK3 441 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 SETD9Q8NE22 299 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 OR4A5Q8NH83 315 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 OSR1Q8TAX0 266 aaPredicted RBP7.05□□□□□ -1.28
GPNMB-211ENST00000479625 RNF141Q8WVD5 230 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 PYDC1Q8WXC3 89 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 MAFIPQ8WZ33 124 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 TMEM190Q8WZ59 177 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 ARHGAP5-AS1Q96IT6 56 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 SCRT1Q9BWW7 348 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 RIMS4Q9H426 269 aaPredicted RBP7.05□□□□□ -1.28
GPNMB-211ENST00000479625 MGAT4AQ9UM21 535 aa7.05□□□□□ -1.28
GPNMB-211ENST00000479625 NACAE9PAV3 2078 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 IGLV11-55A0A075B6I3 123 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 IGLV2-18A0A075B6J9 118 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 TRDCB7Z8K6 153 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 FABP7O15540 132 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 FCGR3BO75015 233 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 ZNF735P0CB33 412 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 RBMY1A1P0DJD3 496 aaKnown RBP7.04□□□□□ -1.28
GPNMB-211ENST00000479625 RBMY1CP0DJD4 496 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 MYL12AP19105 171 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 GALP22466 123 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 DCKP27707 260 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 HLA-DMBP28068 263 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 PSMB6P28072 239 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 TFPI2P48307 235 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 ELLP55199 621 aaPredicted RBP7.04□□□□□ -1.28
GPNMB-211ENST00000479625 TMEM50BP56557 158 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 RBMY1FQ15415 496 aaKnown RBP7.04□□□□□ -1.28
GPNMB-211ENST00000479625 RBM48Q5RL73 367 aaKnown RBP7.04□□□□□ -1.28
GPNMB-211ENST00000479625 C1orf100Q5SVJ3 147 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 LRRTM1Q86UE6 522 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 POM121L12Q8N7R1 296 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 OR4A4PQ8NGN8 299 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 ZNF502Q8TBZ5 544 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 CMSS1Q9BQ75 279 aaKnown RBP7.04□□□□□ -1.28
GPNMB-211ENST00000479625 DCUN1D5Q9BTE7 237 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 CABLES2Q9BTV7 478 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 CHRDL1Q9BU40 450 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 PECRQ9BY49 303 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 KRTAP4-7Q9BYR0 210 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 ZNF436Q9C0F3 470 aaPredicted RBP7.04□□□□□ -1.28
GPNMB-211ENST00000479625 SLC2A9Q9NRM0 540 aa7.04□□□□□ -1.28
GPNMB-211ENST00000479625 DIMT1Q9UNQ2 313 aaKnown RBP7.04□□□□□ -1.28
GPNMB-211ENST00000479625 IGKV3-7A0A075B6H7 116 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 TRBV6-7A0A0A0MS04 114 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 TRBV7-1A0A0A6YYK4 115 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 TRAV10A0A0B4J240 114 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 IGHV4-28A0A0C4DH34 117 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms