RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 MEGF8Q7Z7M0 2845 aa9.67□□□□□ -0.86
CLCNKA-205ENST00000477360 SRRM4A7MD48 611 aaKnown RBP9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 GPR31O00270 319 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 FCGR3BO75015 233 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 CA2P00918 260 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 EGR2P11161 476 aaPredicted RBP9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 TAS2R31P59538 309 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 FXYD4P59646 89 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 RND3P61587 244 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 RPL30P62888 115 aaKnown RBP9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 IFITM3Q01628 133 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 FXYD3Q14802 87 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 PRSS8Q16651 343 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 ZNF818PQ6ZRF7 136 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 SLC38A6Q8IZM9 456 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 POC5Q8NA72 575 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 OR4A5Q8NH83 315 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 ZFAND1Q8TCF1 268 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 TCTEX1D2Q8WW35 142 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 SCGB3A2Q96PL1 93 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 P2RX4Q99571 388 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 MCRIP2Q9BUT9 160 aaKnown RBP9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 PLEKHA2Q9HB19 425 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 CCL28Q9NRJ3 127 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 LINC00527Q9UJ94 153 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 GPR132Q9UNW8 380 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 VSIG4Q9Y279 399 aa9.66□□□□□ -0.86
CLCNKA-205ENST00000477360 LYRM1O43325 122 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 OR2A4O95047 310 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 CNIH1O95406 144 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 HPRT1P00492 218 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 PF4P02776 101 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 RPLP1P05386 114 aaKnown RBP9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 CTSDP07339 412 aaPredicted RBP9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 BTCP35070 178 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 RAB9AP51151 201 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 RBMS2Q15434 407 aaKnown RBP9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 SCGB2B2Q4G0G5 96 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 KHDC1LQ5JSQ8 128 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 SAMD5Q5TGI4 173 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 IDO2Q6ZQW0 420 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 PUSL1Q8N0Z8 303 aaKnown RBP9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 TMEM167AQ8TBQ9 72 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 RHOVQ96L33 236 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 OR2A7Q96R45 310 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 SPIN2AQ99865 258 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 SPIN2BQ9BPZ2 258 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 MCUBQ9NWR8 336 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 BET1LQ9NYM9 111 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 COMMD9Q9P000 198 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 TBC1D24Q9ULP9 559 aa9.65□□□□□ -0.86
CLCNKA-205ENST00000477360 NOTCH3Q9UM47 2321 aa9.65□□□□□ -0.87
CLCNKA-205ENST00000477360 NUDT19A8MXV4 375 aa9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 G3V318 75 aa9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 ACTL6BO94805 426 aa9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 SAA1P0DJI8 122 aaPredicted RBP9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 NQO2P16083 231 aa9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 F2RP25116 425 aa9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 BRWD1-AS2P59051 145 aa9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 SSBP2P81877 361 aaPredicted RBP9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 FHL3Q13643 280 aa9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 KIAA0141Q14154 515 aaPredicted RBP9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 SPAG16Q8N0X2 631 aa9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 LINC00482Q8N8I6 264 aa9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 ZNF491Q8N8L2 437 aa9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 KLHL30-AS1Q8NEE0 82 aa9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 MARCH1Q8TCQ1 289 aa9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 ZMAT5Q9UDW3 170 aaKnown RBP9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 FBXO7Q9Y3I1 522 aa9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 WSB1Q9Y6I7 421 aa9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 CMYA5Q8N3K9 4069 aa9.64□□□□□ -0.87
CLCNKA-205ENST00000477360 A0A0G2JLM5 398 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 A0A1W2PRX2 142 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 WIPF1O43516 503 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 SOX15O60248 233 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 B3GALNT1O75752 331 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 NDUFB6O95139 128 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 IL6RP08887 468 aaPredicted RBP9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 CD33P20138 364 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 MRGPRG-AS1Q2M3A8 158 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 FAM209BQ5JX69 171 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 THOC7Q6I9Y2 204 aaKnown RBP9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 UNQ5815/PRO19632Q6UWF5 114 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 ETV3LQ6ZN32 361 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 REC114Q7Z4M0 266 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 SLC25A42Q86VD7 318 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 LFNGQ8NES3 379 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 ABHD5Q8WTS1 349 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 SRSF8Q9BRL6 282 aaKnown RBP9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 SLC2A9Q9NRM0 540 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 TPSG1Q9NRR2 321 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 COPZ2Q9P299 210 aa9.63□□□□□ -0.87
CLCNKA-205ENST00000477360 A0A1W2PN81 502 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 I3L521 148 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 CCL24O00175 119 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 PGLYRP1O75594 196 aaPredicted RBP9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 KBTBD11O94819 623 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 PGAM2P15259 253 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 CHRNA7P36544 502 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 DEFA1P59665 94 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms