RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 TRGV10A0A0A0MS01 117 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 DPRXA6NFQ7 191 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 CLDN14O95500 239 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 HLA-DQA1P01909 254 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 AARDQ4LEZ3 155 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 RPS19BP1Q86WX3 136 aaKnown RBP12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 FGFBP3Q8TAT2 258 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 RNF114Q9Y508 228 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 RIF1Q5UIP0 2472 aaKnown RBP12.75□□□□□ -0.37
CLSTN1-205ENST00000477264 F2Z2F3 143 aa12.75□□□□□ -0.37
CLSTN1-205ENST00000477264 SIRPB1O00241 398 aa12.75□□□□□ -0.37
CLSTN1-205ENST00000477264 DLL1O00548 723 aa12.75□□□□□ -0.37
CLSTN1-205ENST00000477264 AQP7O14520 342 aa12.75□□□□□ -0.37
CLSTN1-205ENST00000477264 SYNGR1O43759 233 aa12.75□□□□□ -0.37
CLSTN1-205ENST00000477264 ZG16O60844 167 aa12.75□□□□□ -0.37
CLSTN1-205ENST00000477264 ARL14EPLP0DKL9 152 aa12.75□□□□□ -0.37
CLSTN1-205ENST00000477264 HNF1AP20823 631 aa12.75□□□□□ -0.37
CLSTN1-205ENST00000477264 SSR4P51571 173 aa12.75□□□□□ -0.37
CLSTN1-205ENST00000477264 ZNF718Q3SXZ3 478 aa12.75□□□□□ -0.37
CLSTN1-205ENST00000477264 ZNF497Q6ZNH5 498 aa12.75□□□□□ -0.37
CLSTN1-205ENST00000477264 WDR31Q8NA23 367 aa12.75□□□□□ -0.37
CLSTN1-205ENST00000477264 OR4C5Q8NGB2 326 aa12.75□□□□□ -0.37
CLSTN1-205ENST00000477264 NCOR1P1Q9H4R4 102 aa12.75□□□□□ -0.37
CLSTN1-205ENST00000477264 MRPL27Q9P0M9 148 aaKnown RBP12.75□□□□□ -0.37
CLSTN1-205ENST00000477264 MED12Q93074 2177 aa12.75□□□□□ -0.37
CLSTN1-205ENST00000477264 LOC105371242A0A075B767 164 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 TRAV38-1A0A0B4J264 116 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 STUMQ69YW2 141 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 BORCS7Q96B45 105 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 TAAR6Q96RI8 345 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 MPC1Q9Y5U8 109 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 A0A1W2PS18 150 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 CDIPTO14735 213 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 TM4SF5O14894 197 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 SS18L1O75177 396 aaPredicted RBP12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 C3orf79P0CE67 100 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 AREGP15514 252 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 MLF1P58340 268 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 GNG3P63215 75 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 CX3CL1P78423 397 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 GCNT2Q8N0V5 402 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 OR4P4Q8NGL7 312 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 MBNL3Q9NUK0 354 aaKnown RBP12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 NAT8BQ9UHF3 227 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 TRAPPC2LQ9UL33 140 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 V9GYV3 84 aa12.74□□□□□ -0.37
CLSTN1-205ENST00000477264 AHCTF1Q8WYP5 2266 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 WISP2O76076 250 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 RAC2P15153 192 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 PMCHP20382 165 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 G6PCP35575 357 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 THBS3P49746 956 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 PSG7Q13046 419 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 ALKBH2Q6NS38 261 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 LYG1Q8N1E2 194 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 EAF1Q96JC9 268 aaPredicted RBP12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 DMXL1Q9Y485 3027 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 PTPRBP23467 1997 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 A0A1W2PR80 420 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 C15orf62A8K5M9 175 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 K7EN84 100 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 SH2D1BO14796 132 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 NXPH2O95156 264 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 AMY1AP04745 511 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 SRD5A2P31213 254 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 Q6P435 159 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 TMEM136Q6ZRR5 245 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 Q8IYB0 196 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 CORO2AQ92828 525 aa12.73□□□□□ -0.37
CLSTN1-205ENST00000477264 J3QT63 122 aa12.72□□□□□ -0.37
CLSTN1-205ENST00000477264 SLC17A3O00476 420 aa12.72□□□□□ -0.37
CLSTN1-205ENST00000477264 CEACAM8P31997 349 aaPredicted RBP12.72□□□□□ -0.37
CLSTN1-205ENST00000477264 PLA2G5P39877 138 aa12.72□□□□□ -0.37
CLSTN1-205ENST00000477264 ZNF83P51522 516 aa12.72□□□□□ -0.37
CLSTN1-205ENST00000477264 CARD18P57730 90 aa12.72□□□□□ -0.37
CLSTN1-205ENST00000477264 EIF4EBP1Q13541 118 aaPredicted RBP12.72□□□□□ -0.37
CLSTN1-205ENST00000477264 UNQ5815/PRO19632Q6UWF5 114 aa12.72□□□□□ -0.37
CLSTN1-205ENST00000477264 H2BFWTQ7Z2G1 175 aa12.72□□□□□ -0.37
CLSTN1-205ENST00000477264 NIT1Q86X76 327 aa12.72□□□□□ -0.37
CLSTN1-205ENST00000477264 TMEM45BQ96B21 275 aa12.72□□□□□ -0.37
CLSTN1-205ENST00000477264 OSTCQ9NRP0 149 aa12.72□□□□□ -0.37
CLSTN1-205ENST00000477264 PPIAL4AQ9Y536 164 aa12.72□□□□□ -0.37
CLSTN1-205ENST00000477264 GTF3C1Q12789 2109 aa12.72□□□□□ -0.37
CLSTN1-205ENST00000477264 IGLC7A0M8Q6 106 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 ANKRD30BLA7E2S9 258 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 CCL3P10147 92 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 DEFA4P12838 97 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 NTF4P34130 210 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 HINT1P49773 126 aaPredicted RBP12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 EDDM3BP56851 147 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 RPL31P62899 125 aaKnown RBP12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 Q0VFX4 171 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 OR2M7Q8NG81 312 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 ZDHHC16Q969W1 377 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 TRAV9-2A0A087WT02 112 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 G3V3Y1 287 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 CA2P00918 260 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 GCHFRP30047 84 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 RHOGP84095 191 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 PDLIM3Q53GG5 364 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms