RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 PSMB6P28072 239 aa8.35□□□□□ -1.07
BRCA1-213ENST00000476777 PLAC9Q5JTB6 97 aa8.35□□□□□ -1.07
BRCA1-213ENST00000476777 RBM48Q5RL73 367 aaKnown RBP8.35□□□□□ -1.07
BRCA1-213ENST00000476777 GVQW1Q8N7I0 195 aa8.35□□□□□ -1.07
BRCA1-213ENST00000476777 SETD9Q8NE22 299 aa8.35□□□□□ -1.07
BRCA1-213ENST00000476777 GALNT14Q96FL9 552 aa8.35□□□□□ -1.07
BRCA1-213ENST00000476777 FYTTD1Q96QD9 318 aaKnown RBP8.35□□□□□ -1.07
BRCA1-213ENST00000476777 RARRES2Q99969 163 aa8.35□□□□□ -1.07
BRCA1-213ENST00000476777 C9orf16Q9BUW7 83 aa8.35□□□□□ -1.07
BRCA1-213ENST00000476777 HSPG2P98160 4391 aa8.35□□□□□ -1.07
BRCA1-213ENST00000476777 TRBV7-1A0A0A6YYK4 115 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 IGHV3-35A0A0C4DH35 117 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 DPPA5A6NC42 116 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 EFCAB10A6NFE3 127 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 MFSD2BA6NFX1 497 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 XRCC3O43542 346 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 DIRAS3O95661 229 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 ZNF735P0CB33 412 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 GSTT2P0CG29 244 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 GSTT2BP0CG30 244 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 ELLP55199 621 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-213ENST00000476777 ST3GAL4Q11206 333 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 P2RY14Q15391 338 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 MED22Q15528 200 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 ACSM3Q53FZ2 586 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 VKORC1L1Q8N0U8 176 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 OR6M1Q8NGM8 313 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 OR51E2Q9H255 320 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 UFC1Q9Y3C8 167 aa8.34□□□□□ -1.07
BRCA1-213ENST00000476777 RBM7Q9Y580 266 aaKnown RBP8.34□□□□□ -1.07
BRCA1-213ENST00000476777 IGLV11-55A0A075B6I3 123 aa8.33□□□□□ -1.08
BRCA1-213ENST00000476777 IGLL5B9A064 214 aa8.33□□□□□ -1.08
BRCA1-213ENST00000476777 FCGR3BO75015 233 aa8.33□□□□□ -1.08
BRCA1-213ENST00000476777 MYOD1P15172 320 aa8.33□□□□□ -1.08
BRCA1-213ENST00000476777 HIST1H1BP16401 226 aaKnown RBP8.33□□□□□ -1.08
BRCA1-213ENST00000476777 RPL27AP46776 148 aaKnown RBP8.33□□□□□ -1.08
BRCA1-213ENST00000476777 MFAP2P55001 183 aa8.33□□□□□ -1.08
BRCA1-213ENST00000476777 WNT4P56705 351 aa8.33□□□□□ -1.08
BRCA1-213ENST00000476777 ZFP1Q6P2D0 407 aa8.33□□□□□ -1.08
BRCA1-213ENST00000476777 OR11H2Q8NH07 326 aa8.33□□□□□ -1.08
BRCA1-213ENST00000476777 OR5B3Q8NH48 314 aa8.33□□□□□ -1.08
BRCA1-213ENST00000476777 DCUN1D5Q9BTE7 237 aa8.33□□□□□ -1.08
BRCA1-213ENST00000476777 ZNF436Q9C0F3 470 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-213ENST00000476777 CSTL1Q9H114 145 aa8.33□□□□□ -1.08
BRCA1-213ENST00000476777 KCNK7Q9Y2U2 307 aa8.33□□□□□ -1.08
BRCA1-213ENST00000476777 MPTX1A8MV57 137 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 DEFB4AO15263 64 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 ATP5HO75947 161 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 KBTBD11O94819 623 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 DHFRP00374 187 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 CDK1P06493 297 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 FCGR3AP08637 254 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 GPR183P32249 361 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 APRG1Q8IVJ8 170 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 H1FOOQ8IZA3 346 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-213ENST00000476777 PUSL1Q8N0Z8 303 aaKnown RBP8.32□□□□□ -1.08
BRCA1-213ENST00000476777 MS4A15Q8N5U1 240 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 ZNF555Q8NEP9 628 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 ZNF502Q8TBZ5 544 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 CD300LFQ8TDQ1 290 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 TMEM190Q8WZ59 177 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 CXorf58Q96LI9 332 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 OR2A7Q96R45 310 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 GFI1Q99684 422 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 GINS4Q9BRT9 223 aa8.32□□□□□ -1.08
BRCA1-213ENST00000476777 OR4C46A6NHA9 309 aa8.31□□□□□ -1.08
BRCA1-213ENST00000476777 PRSS29PA6NIE9 313 aa8.31□□□□□ -1.08
BRCA1-213ENST00000476777 SLC17A2O00624 439 aa8.31□□□□□ -1.08
BRCA1-213ENST00000476777 MYL12BO14950 172 aa8.31□□□□□ -1.08
BRCA1-213ENST00000476777 RTL8CO15255 209 aa8.31□□□□□ -1.08
BRCA1-213ENST00000476777 REG1AP05451 166 aa8.31□□□□□ -1.08
BRCA1-213ENST00000476777 DEFA4P12838 97 aa8.31□□□□□ -1.08
BRCA1-213ENST00000476777 MAS1LP35410 378 aa8.31□□□□□ -1.08
BRCA1-213ENST00000476777 ARFRP1Q13795 201 aa8.31□□□□□ -1.08
BRCA1-213ENST00000476777 ZNF124Q15973 351 aa8.31□□□□□ -1.08
BRCA1-213ENST00000476777 HSD17B12Q53GQ0 312 aa8.31□□□□□ -1.08
BRCA1-213ENST00000476777 LAMTOR1Q6IAA8 161 aa8.31□□□□□ -1.08
BRCA1-213ENST00000476777 PLET1Q6UQ28 207 aa8.31□□□□□ -1.08
BRCA1-213ENST00000476777 OR56B1Q8NGI3 324 aa8.31□□□□□ -1.08
BRCA1-213ENST00000476777 TMEM167AQ8TBQ9 72 aa8.31□□□□□ -1.08
BRCA1-213ENST00000476777 MAFIPQ8WZ33 124 aa8.31□□□□□ -1.08
BRCA1-213ENST00000476777 C6orf62Q9GZU0 229 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-213ENST00000476777 DAZ1Q9NQZ3 744 aaKnown RBP8.31□□□□□ -1.08
BRCA1-213ENST00000476777 SMPD3Q9NY59 655 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-213ENST00000476777 HERC1Q15751 4861 aa8.3□□□□□ -1.08
BRCA1-213ENST00000476777 CGB1A6NKQ9 187 aa8.3□□□□□ -1.08
BRCA1-213ENST00000476777 C11orf94C9JXX5 98 aa8.3□□□□□ -1.08
BRCA1-213ENST00000476777 UCHL1P09936 223 aa8.3□□□□□ -1.08
BRCA1-213ENST00000476777 RPA2P15927 270 aa8.3□□□□□ -1.08
BRCA1-213ENST00000476777 ADMP35318 185 aa8.3□□□□□ -1.08
BRCA1-213ENST00000476777 PSMD7P51665 324 aa8.3□□□□□ -1.08
BRCA1-213ENST00000476777 RPL30P62888 115 aaKnown RBP8.3□□□□□ -1.08
BRCA1-213ENST00000476777 MRPS15P82914 257 aaKnown RBP8.3□□□□□ -1.08
BRCA1-213ENST00000476777 IRF3Q14653 427 aa8.3□□□□□ -1.08
BRCA1-213ENST00000476777 LINC01559Q495D7 138 aa8.3□□□□□ -1.08
BRCA1-213ENST00000476777 OR2B11Q5JQS5 317 aa8.3□□□□□ -1.08
BRCA1-213ENST00000476777 KCTD9Q7L273 389 aa8.3□□□□□ -1.08
BRCA1-213ENST00000476777 ZNF645Q8N7E2 425 aa8.3□□□□□ -1.08
BRCA1-213ENST00000476777 NANOGP1Q8N7R0 232 aa8.3□□□□□ -1.08
BRCA1-213ENST00000476777 VSTM2AQ8TAG5 236 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms