RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 DNAH3Q8TD57 4116 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 IGHV4OR15-8A0A075B7B6 117 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 A0A087WW49 117 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 TNFSF12O43508 249 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 TPPPO94811 219 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 IGLV2-14P01704 120 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 FCER2P06734 321 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 PTHLHP12272 177 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 NQO2P16083 231 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 ZNF182P17025 639 aaPredicted RBP7.9□□□□□ -1.14
CCM2-208ENST00000476594 KRTAP10-11P60412 298 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 RPL30P62888 115 aaKnown RBP7.9□□□□□ -1.14
CCM2-208ENST00000476594 RPL8P62917 257 aaKnown RBP7.9□□□□□ -1.14
CCM2-208ENST00000476594 THOC7Q6I9Y2 204 aaKnown RBP7.9□□□□□ -1.14
CCM2-208ENST00000476594 DHRS11Q6UWP2 260 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 DMBX1Q8NFW5 382 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 MOB3AQ96BX8 217 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 HRASLSQ9HDD0 168 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 BET1LQ9NYM9 111 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 COMMD9Q9P000 198 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 ANAPC10Q9UM13 185 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 ZNF257Q9Y2Q1 563 aa7.9□□□□□ -1.14
CCM2-208ENST00000476594 WI2-2373I1.2A0A1W2PRP0 233 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 PMP2P02689 132 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 IFNA6P05013 189 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 EIF4EP06730 217 aaKnown RBP7.89□□□□□ -1.15
CCM2-208ENST00000476594 FGF2P09038 288 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 HIST1H1BP16401 226 aaKnown RBP7.89□□□□□ -1.15
CCM2-208ENST00000476594 NAT1P18440 290 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 SLURP1P55000 103 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 ATP5G2Q06055 141 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 RPEL1Q2QD12 228 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 ASPHD1Q5U4P2 390 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 GPR107Q5VW38 600 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 ZNF818PQ6ZRF7 136 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 SSX9Q7RTT3 188 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 SNX29P2Q8IUI4 249 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 PUSL1Q8N0Z8 303 aaKnown RBP7.89□□□□□ -1.15
CCM2-208ENST00000476594 TTC9CQ8N5M4 171 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 ADAD2Q8NCV1 583 aaKnown RBP7.89□□□□□ -1.15
CCM2-208ENST00000476594 OR51H1Q8NH63 302 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 DLX4Q92988 240 aaPredicted RBP7.89□□□□□ -1.15
CCM2-208ENST00000476594 BCL7BQ9BQE9 202 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 COMMD5Q9GZQ3 224 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 ALX4Q9H161 411 aaPredicted RBP7.89□□□□□ -1.15
CCM2-208ENST00000476594 PLEKHA2Q9HB19 425 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 RABL2AQ9UBK7 228 aaPredicted RBP7.89□□□□□ -1.15
CCM2-208ENST00000476594 PEF1Q9UBV8 284 aaKnown RBP7.89□□□□□ -1.15
CCM2-208ENST00000476594 RABL2BQ9UNT1 228 aa7.89□□□□□ -1.15
CCM2-208ENST00000476594 NPIPB5A8MRT5 1133 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 GPR31O00270 319 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 HPGDSO60760 199 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 SMIM18P0DKX4 95 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 APELAP0DMC3 54 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 DEFA4P12838 97 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 HLA-GP17693 338 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 TBPP20226 339 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 F2RP25116 425 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 HLA-DMAP28067 261 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 HRH1P35367 487 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 RFX2P48378 723 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 SSBP2P81877 361 aaPredicted RBP7.88□□□□□ -1.15
CCM2-208ENST00000476594 MRPS10P82664 201 aaKnown RBP7.88□□□□□ -1.15
CCM2-208ENST00000476594 RHOGP84095 191 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 EIF4EBP1Q13541 118 aaPredicted RBP7.88□□□□□ -1.15
CCM2-208ENST00000476594 ZNF343Q6P1L6 599 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 ACSM6Q6P461 480 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 HSD17B13Q7Z5P4 300 aaPredicted RBP7.88□□□□□ -1.15
CCM2-208ENST00000476594 VKORC1L1Q8N0U8 176 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 NECAP1Q8NC96 275 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 GPX8Q8TED1 209 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 RAB2BQ8WUD1 216 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 FYTTD1Q96QD9 318 aaKnown RBP7.88□□□□□ -1.15
CCM2-208ENST00000476594 TSC22D3Q99576 134 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 B9D2Q9BPU9 175 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 SRSF8Q9BRL6 282 aaKnown RBP7.88□□□□□ -1.15
CCM2-208ENST00000476594 RSRP1Q9BUV0 290 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 THYN1Q9P016 225 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 PEMTQ9UBM1 199 aa7.88□□□□□ -1.15
CCM2-208ENST00000476594 ANKRD34BA5PLL1 514 aa7.87□□□□□ -1.15
CCM2-208ENST00000476594 RGS5O15539 181 aa7.87□□□□□ -1.15
CCM2-208ENST00000476594 SNAPC5O75971 98 aa7.87□□□□□ -1.15
CCM2-208ENST00000476594 RLN1P04808 185 aa7.87□□□□□ -1.15
CCM2-208ENST00000476594 ELK1P19419 428 aa7.87□□□□□ -1.15
CCM2-208ENST00000476594 GNRHRP30968 328 aa7.87□□□□□ -1.15
CCM2-208ENST00000476594 EXOSC2Q13868 293 aaKnown RBP7.87□□□□□ -1.15
CCM2-208ENST00000476594 CTF1Q16619 201 aa7.87□□□□□ -1.15
CCM2-208ENST00000476594 POU2AF1Q16633 256 aa7.87□□□□□ -1.15
CCM2-208ENST00000476594 RNASE10Q5GAN6 216 aaKnown RBP7.87□□□□□ -1.15
CCM2-208ENST00000476594 OR4A47Q6IF82 309 aa7.87□□□□□ -1.15
CCM2-208ENST00000476594 SLC38A6Q8IZM9 456 aa7.87□□□□□ -1.15
CCM2-208ENST00000476594 SLC2A9Q9NRM0 540 aa7.87□□□□□ -1.15
CCM2-208ENST00000476594 FAM212BQ9NTI7 297 aaPredicted RBP7.87□□□□□ -1.15
CCM2-208ENST00000476594 EXTL2Q9UBQ6 330 aa7.87□□□□□ -1.15
CCM2-208ENST00000476594 SCOCQ9UIL1 159 aa7.87□□□□□ -1.15
CCM2-208ENST00000476594 SMAD5-AS1Q9Y6J3 95 aa7.87□□□□□ -1.15
CCM2-208ENST00000476594 TRBV9A0A0B4J1U6 114 aa7.86□□□□□ -1.15
CCM2-208ENST00000476594 MARCH11A6NNE9 402 aa7.86□□□□□ -1.15
CCM2-208ENST00000476594 H0Y980 276 aa7.86□□□□□ -1.15
CCM2-208ENST00000476594 PGLYRP1O75594 196 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms