RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 CENPSQ8N2Z9 138 aa11.35□□□□□ -0.59
CCNL1-217ENST00000476367 TCTEX1D1Q8N7M0 179 aa11.35□□□□□ -0.59
CCNL1-217ENST00000476367 SCGB3A2Q96PL1 93 aa11.35□□□□□ -0.59
CCNL1-217ENST00000476367 PALMDQ9NP74 551 aa11.35□□□□□ -0.59
CCNL1-217ENST00000476367 IGHV7-81A0A0B4J1V7 117 aa11.34□□□□□ -0.59
CCNL1-217ENST00000476367 A0A0G2JRQ6 117 aa11.34□□□□□ -0.59
CCNL1-217ENST00000476367 TEX13DA0A0J9YY54 714 aaPredicted RBP11.34□□□□□ -0.59
CCNL1-217ENST00000476367 UBE2KP61086 200 aa11.34□□□□□ -0.59
CCNL1-217ENST00000476367 ANKRD55Q3KP44 614 aa11.34□□□□□ -0.59
CCNL1-217ENST00000476367 MZT2BQ6NZ67 158 aa11.34□□□□□ -0.59
CCNL1-217ENST00000476367 CENPVQ7Z7K6 275 aaPredicted RBP11.34□□□□□ -0.59
CCNL1-217ENST00000476367 CCDC71LQ8N9Z2 235 aa11.34□□□□□ -0.59
CCNL1-217ENST00000476367 CD300LFQ8TDQ1 290 aa11.34□□□□□ -0.59
CCNL1-217ENST00000476367 CITED1Q99966 193 aa11.34□□□□□ -0.59
CCNL1-217ENST00000476367 PARP11Q9NR21 331 aa11.34□□□□□ -0.59
CCNL1-217ENST00000476367 FBXO7Q9Y3I1 522 aa11.34□□□□□ -0.59
CCNL1-217ENST00000476367 A0A1B0GW64 132 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 MARCH11A6NNE9 402 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 E7EUB6 86 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 AP4M1O00189 453 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 FBXO24O75426 580 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 EGR2P11161 476 aaPredicted RBP11.33□□□□□ -0.6
CCNL1-217ENST00000476367 RPA2P15927 270 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 G6PCP35575 357 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 TAS2R31P59538 309 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 DCTN2Q13561 401 aaKnown RBP11.33□□□□□ -0.6
CCNL1-217ENST00000476367 IZUMO4Q1ZYL8 232 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 OR4A47Q6IF82 309 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 SSX9Q7RTT3 188 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 ZNF329Q86UD4 541 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 STPG2Q8N412 459 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 OR52B4Q8NGK2 314 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 ABHD5Q8WTS1 349 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 TMEM56Q96MV1 263 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 ALX4Q9H161 411 aaPredicted RBP11.33□□□□□ -0.6
CCNL1-217ENST00000476367 COMMD9Q9P000 198 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 TMEM56-RWDD3S4R434 201 aa11.33□□□□□ -0.6
CCNL1-217ENST00000476367 A0A0B4J293 547 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 C9orf170A2RU37 121 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 PSMB11A5LHX3 300 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 DBX1A6NMT0 343 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 ATP6V0E1O15342 81 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 CA2P00918 260 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 KRASP01116 189 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 OR4E1P0C645 316 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 CD28P10747 220 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 MYOD1P15172 320 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 RAB25P57735 213 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 DHRS2Q13268 280 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 VMA21Q3ZAQ7 101 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 PPP1R27Q86WC6 154 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 SELENOHQ8IZQ5 122 aaKnown RBP11.32□□□□□ -0.6
CCNL1-217ENST00000476367 TEX45Q8NA69 505 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 OR5AU1Q8NGC0 362 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 WIPF2Q8TF74 440 aaPredicted RBP11.32□□□□□ -0.6
CCNL1-217ENST00000476367 R3HDM4Q96D70 268 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 MARVELD1Q9BSK0 173 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 OR51J1Q9H342 316 aa11.32□□□□□ -0.6
CCNL1-217ENST00000476367 ZNF430Q9H8G1 570 aaPredicted RBP11.32□□□□□ -0.6
CCNL1-217ENST00000476367 CGB1A6NKQ9 187 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 KBTBD11O94819 623 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 SFT2D2O95562 160 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 OR9G9P0C7N8 305 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 NQO2P16083 231 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 S100GP29377 79 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 GNB1P62873 340 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 PRSS8Q16651 343 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 Q6ZRM9 215 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 SGPP2Q8IWX5 399 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 CADM3Q8N126 398 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 TMEM167AQ8TBQ9 72 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 CHPT1Q8WUD6 406 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 NUBP2Q9Y5Y2 271 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 OR2A4O95047 310 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 HRASP01112 189 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 H2AFB2P0C5Z0 115 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 UBE2MP61081 183 aaKnown RBP11.31□□□□□ -0.6
CCNL1-217ENST00000476367 CX3CL1P78423 397 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 ECSCRQ19T08 205 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 C19orf54Q5BKX5 351 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 KHDC1LQ5JSQ8 128 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 OR4X2Q8NGF9 303 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 ENKURQ8TC29 256 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 OR2A7Q96R45 310 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 FAM103A1Q9BTL3 118 aaKnown RBP11.31□□□□□ -0.6
CCNL1-217ENST00000476367 TMEM140Q9NV12 185 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 BET1LQ9NYM9 111 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 WSB1Q9Y6I7 421 aa11.31□□□□□ -0.6
CCNL1-217ENST00000476367 VWFP04275 2813 aa11.3□□□□□ -0.6
CCNL1-217ENST00000476367 TRRAPQ9Y4A5 3859 aa11.3□□□□□ -0.6
CCNL1-217ENST00000476367 B3GALNT1O75752 331 aa11.3□□□□□ -0.6
CCNL1-217ENST00000476367 SERPINE2P07093 398 aa11.3□□□□□ -0.6
CCNL1-217ENST00000476367 VDAC1P21796 283 aa11.3□□□□□ -0.6
CCNL1-217ENST00000476367 VAMP1P23763 118 aa11.3□□□□□ -0.6
CCNL1-217ENST00000476367 DEFA1P59665 94 aa11.3□□□□□ -0.6
CCNL1-217ENST00000476367 DEFA3P59666 94 aa11.3□□□□□ -0.6
CCNL1-217ENST00000476367 C10orf55Q5SWW7 151 aa11.3□□□□□ -0.6
CCNL1-217ENST00000476367 ZNF562Q6V9R5 426 aa11.3□□□□□ -0.6
CCNL1-217ENST00000476367 LYZL2Q7Z4W2 148 aa11.3□□□□□ -0.6
CCNL1-217ENST00000476367 LYG2Q86SG7 212 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms