RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 UCP1P25874 307 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 SLC6A1P30531 599 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 FAUP35544 74 aaKnown RBP5.48□□□□□ -1.53
LIMD1-204ENST00000474665 KIR2DS2P43631 304 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 DHODHQ02127 395 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 CATR1Q13166 79 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 PRSS8Q16651 343 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 IZUMO4Q1ZYL8 232 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 C9orf152Q5JTZ5 239 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 C10orf55Q5SWW7 151 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 ASPHD1Q5U4P2 390 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 OR4A47Q6IF82 309 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 ZNF562Q6V9R5 426 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 SSX9Q7RTT3 188 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 SLC35E3Q7Z769 313 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 PPP1R27Q86WC6 154 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 KLHDC1Q8N7A1 406 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 TEX45Q8NA69 505 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 OR2T6Q8NHC8 308 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 BORCS5Q969J3 196 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 R3HDM4Q96D70 268 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 RASL11BQ9BPW5 248 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 C7orf50Q9BRJ6 194 aaKnown RBP5.48□□□□□ -1.53
LIMD1-204ENST00000474665 OR51J1Q9H342 316 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 NAA60Q9H7X0 242 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 BEX1Q9HBH7 125 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 FAM212BQ9NTI7 297 aaPredicted RBP5.48□□□□□ -1.53
LIMD1-204ENST00000474665 PRR13Q9NZ81 148 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 COPZ2Q9P299 210 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 C3orf85A0A1B0GTC6 90 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 A0A1B0GUS0 222 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 MARCH11A6NNE9 402 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 ADARB2-AS1A8MUL3 147 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 UPK2O00526 184 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 KBTBD11O94819 623 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 OR2A4O95047 310 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 CDS2O95674 445 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 KRASP01116 189 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 OR9G9P0C7N8 305 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 NQO2P16083 231 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 PPIFP30405 207 aaKnown RBP5.47□□□□□ -1.53
LIMD1-204ENST00000474665 G6PCP35575 357 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 ECI1P42126 302 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 VDAC2P45880 294 aaPredicted RBP5.47□□□□□ -1.53
LIMD1-204ENST00000474665 CRIP2P52943 208 aaPredicted RBP5.47□□□□□ -1.53
LIMD1-204ENST00000474665 TAS2R31P59538 309 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 PPP1R1AQ13522 171 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 KIAA0141Q14154 515 aaPredicted RBP5.47□□□□□ -1.53
LIMD1-204ENST00000474665 TMEM187Q14656 261 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 RBMS2Q15434 407 aaKnown RBP5.47□□□□□ -1.53
LIMD1-204ENST00000474665 ANKRD55Q3KP44 614 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 Q6ZRM9 215 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 LCNL1Q6ZST4 164 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 ZNF329Q86UD4 541 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 SLC25A42Q86VD7 318 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 CADM3Q8N126 398 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 STPG2Q8N412 459 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 TCTEX1D1Q8N7M0 179 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 MINDY2Q8NBR6 621 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 TMEM167AQ8TBQ9 72 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 MRAPQ8TCY5 172 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 CD300LFQ8TDQ1 290 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 GALNT14Q96FL9 552 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 OR2A7Q96R45 310 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 CITED1Q99966 193 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 SLC25A21Q9BQT8 299 aaPredicted RBP5.47□□□□□ -1.53
LIMD1-204ENST00000474665 FAM103A1Q9BTL3 118 aaKnown RBP5.47□□□□□ -1.53
LIMD1-204ENST00000474665 TMEM222Q9H0R3 208 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 TMEM140Q9NV12 185 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 BET1LQ9NYM9 111 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 COMMD9Q9P000 198 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 KIAA1456Q9P272 454 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 ZNF580Q9UK33 172 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 C14orf166Q9Y224 244 aaKnown RBP5.47□□□□□ -1.53
LIMD1-204ENST00000474665 NUBP2Q9Y5Y2 271 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 WSB1Q9Y6I7 421 aa5.47□□□□□ -1.53
LIMD1-204ENST00000474665 SORL1Q92673 2214 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 A0A0B4J293 547 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 TEX13DA0A0J9YY54 714 aaPredicted RBP5.46□□□□□ -1.54
LIMD1-204ENST00000474665 TEX22C9J3V5 150 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 AP4M1O00189 453 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 RBMXL2O75526 392 aaKnown RBP5.46□□□□□ -1.54
LIMD1-204ENST00000474665 HRASP01112 189 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 TCRBP04435 133 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 CD28P10747 220 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 SPNP16150 400 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 AKR1C4P17516 323 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 ANXA7P20073 488 aaKnown RBP5.46□□□□□ -1.54
LIMD1-204ENST00000474665 INPP1P49441 399 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 OR2B8PP59922 312 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 CD83Q01151 205 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 FXYD3Q14802 87 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 VMA21Q3ZAQ7 101 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 TMEM128Q5BJH2 165 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 NRARPQ7Z6K4 114 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 TMED4Q7Z7H5 227 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 SELENOHQ8IZQ5 122 aaKnown RBP5.46□□□□□ -1.54
LIMD1-204ENST00000474665 RNF152Q8N8N0 203 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 C11orf44Q8N8P7 122 aa5.46□□□□□ -1.54
LIMD1-204ENST00000474665 CCDC71LQ8N9Z2 235 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms