RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 TSNAXQ99598 290 aaKnown RBP16.04■□□□□ 0.16
SSR1-204ENST00000474597 ATP5SQ99766 215 aa16.04■□□□□ 0.16
SSR1-204ENST00000474597 MS4A7Q9GZW8 240 aaPredicted RBP16.04■□□□□ 0.16
SSR1-204ENST00000474597 BET1LQ9NYM9 111 aa16.04■□□□□ 0.16
SSR1-204ENST00000474597 IGHV1-3A0A0C4DH29 117 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 LEUTXA8MZ59 168 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 UPK2O00526 184 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 CEACAM3P40198 252 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 HOXA1P49639 335 aaPredicted RBP16.03■□□□□ 0.16
SSR1-204ENST00000474597 RPP30P78346 268 aaKnown RBP16.03■□□□□ 0.16
SSR1-204ENST00000474597 HSD17B11Q8NBQ5 300 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 VSTM2AQ8TAG5 236 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 NRGNQ92686 78 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 GINS3Q9BRX5 216 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 ENY2Q9NPA8 101 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 TMEM14BQ9NUH8 114 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 FKBP11Q9NYL4 201 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 TCF19Q9Y242 345 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 IGHV3-72A0A0B4J1Y9 119 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 FGF2P09038 288 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 PDLIM3Q53GG5 364 aaPredicted RBP16.03■□□□□ 0.16
SSR1-204ENST00000474597 ZNF787Q6DD87 383 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 OR8G2PQ6IF36 304 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 SLC25A24Q6NUK1 477 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 TMEM14EPQ6UXP3 125 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 ARV1Q9H2C2 271 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 DPM3Q9P2X0 92 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 OR51B2Q9Y5P1 312 aa16.03■□□□□ 0.16
SSR1-204ENST00000474597 J3QKU1 62 aa16.02■□□□□ 0.16
SSR1-204ENST00000474597 IFNA5P01569 189 aa16.02■□□□□ 0.16
SSR1-204ENST00000474597 S100A1P23297 94 aa16.02■□□□□ 0.16
SSR1-204ENST00000474597 HSPE1P61604 102 aaKnown RBP16.02■□□□□ 0.16
SSR1-204ENST00000474597 PAX2Q02962 417 aa16.02■□□□□ 0.16
SSR1-204ENST00000474597 VMA21Q3ZAQ7 101 aa16.02■□□□□ 0.16
SSR1-204ENST00000474597 PUSL1Q8N0Z8 303 aaKnown RBP16.02■□□□□ 0.16
SSR1-204ENST00000474597 CXorf58Q96LI9 332 aa16.02■□□□□ 0.16
SSR1-204ENST00000474597 CITED4Q96RK1 184 aa16.02■□□□□ 0.16
SSR1-204ENST00000474597 UNKLQ9H9P5 680 aaKnown RBP16.02■□□□□ 0.16
SSR1-204ENST00000474597 HEYLQ9NQ87 328 aaPredicted RBP16.02■□□□□ 0.16
SSR1-204ENST00000474597 MMP26Q9NRE1 261 aa16.02■□□□□ 0.16
SSR1-204ENST00000474597 PFDN2Q9UHV9 154 aa16.02■□□□□ 0.16
SSR1-204ENST00000474597 KBTBD11O94819 623 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 TOX4O94842 621 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 IL6RP08887 468 aaPredicted RBP16.01■□□□□ 0.15
SSR1-204ENST00000474597 PLA2G2AP14555 144 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 LGALS7P47929 136 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 TPTE2P1Q5T6R2 138 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 COMMD7Q86VX2 200 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 OR4A5Q8NH83 315 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 OR4C12Q96R67 309 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 VWC2LB2RUY7 222 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 LY6LH3BQJ8 138 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 SEC11BP0C7V7 166 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 USF1P22415 310 aaPredicted RBP16.01■□□□□ 0.15
SSR1-204ENST00000474597 COL8A1P27658 744 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 DSCR9P59020 149 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 STPG2Q8N412 459 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 HINT2Q9BX68 163 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 SIRPDQ9H106 197 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 LPAR2Q9HBW0 351 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 ZNF257Q9Y2Q1 563 aa16.01■□□□□ 0.15
SSR1-204ENST00000474597 IGHV4-61A0A0C4DH41 118 aa16■□□□□ 0.15
SSR1-204ENST00000474597 ODF3BA8MYP8 253 aa16■□□□□ 0.15
SSR1-204ENST00000474597 SCAF4O95104 1147 aaKnown RBP16■□□□□ 0.15
SSR1-204ENST00000474597 IFNA10P01566 189 aa16■□□□□ 0.15
SSR1-204ENST00000474597 HOXB4P17483 251 aaPredicted RBP16■□□□□ 0.15
SSR1-204ENST00000474597 DVL1P1P54792 670 aaPredicted RBP16■□□□□ 0.15
SSR1-204ENST00000474597 SLC38A11Q08AI6 406 aa16■□□□□ 0.15
SSR1-204ENST00000474597 ARL16Q0P5N6 197 aa16■□□□□ 0.15
SSR1-204ENST00000474597 HCP5Q6MZN7 132 aa16■□□□□ 0.15
SSR1-204ENST00000474597 OR10P1Q8NGE3 313 aa16■□□□□ 0.15
SSR1-204ENST00000474597 IGHV4-30-2A0A087WSY4 118 aa15.99■□□□□ 0.15
SSR1-204ENST00000474597 A0A1W2PRD5 423 aa15.99■□□□□ 0.15
SSR1-204ENST00000474597 A0A1W2PRF3 423 aa15.99■□□□□ 0.15
SSR1-204ENST00000474597 A0A1W2PRM7 423 aa15.99■□□□□ 0.15
SSR1-204ENST00000474597 ZNF705EA8MWA4 302 aaPredicted RBP15.99■□□□□ 0.15
SSR1-204ENST00000474597 FAM157AC9JC47 383 aa15.99■□□□□ 0.15
SSR1-204ENST00000474597 SPP1P10451 314 aa15.99■□□□□ 0.15
SSR1-204ENST00000474597 PAX1P15863 534 aa15.99■□□□□ 0.15
SSR1-204ENST00000474597 LGALS4P56470 323 aa15.99■□□□□ 0.15
SSR1-204ENST00000474597 SCGB1C1Q8TD33 95 aa15.99■□□□□ 0.15
SSR1-204ENST00000474597 PINX1Q96BK5 328 aaKnown RBP15.99■□□□□ 0.15
SSR1-204ENST00000474597 HILPDAQ9Y5L2 63 aa15.99■□□□□ 0.15
SSR1-204ENST00000474597 FAM208BQ5VWN6 2430 aa15.99■□□□□ 0.15
SSR1-204ENST00000474597 OR8U8P0C7N1 319 aa15.98■□□□□ 0.15
SSR1-204ENST00000474597 VDAC2P45880 294 aaPredicted RBP15.98■□□□□ 0.15
SSR1-204ENST00000474597 SULT1A2P50226 295 aa15.98■□□□□ 0.15
SSR1-204ENST00000474597 RPL8P62917 257 aaKnown RBP15.98■□□□□ 0.15
SSR1-204ENST00000474597 HAPLN4Q86UW8 402 aa15.98■□□□□ 0.15
SSR1-204ENST00000474597 OR5B3Q8NH48 314 aa15.98■□□□□ 0.15
SSR1-204ENST00000474597 COMMD5Q9GZQ3 224 aa15.98■□□□□ 0.15
SSR1-204ENST00000474597 PLEKHA3Q9HB20 300 aa15.98■□□□□ 0.15
SSR1-204ENST00000474597 RNASEK-C17orf49H0YIS7 233 aa15.98■□□□□ 0.15
SSR1-204ENST00000474597 FGF16O43320 207 aa15.98■□□□□ 0.15
SSR1-204ENST00000474597 SLC25A17O43808 307 aa15.98■□□□□ 0.15
SSR1-204ENST00000474597 IGLV2-23P01705 113 aa15.98■□□□□ 0.15
SSR1-204ENST00000474597 ATP6V1FQ16864 119 aa15.98■□□□□ 0.15
SSR1-204ENST00000474597 TMEM167AQ8TBQ9 72 aa15.98■□□□□ 0.15
SSR1-204ENST00000474597 GNPNAT1Q96EK6 184 aaPredicted RBP15.98■□□□□ 0.15
SSR1-204ENST00000474597 SH3BGRL3Q9H299 93 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms