RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 LEG1Q6P5S2 330 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 DNM1P46Q6ZS02 220 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 RPS19BP1Q86WX3 136 aaKnown RBP2.84□□□□□ -1.96
UBR3-208ENST00000474426 ZNF501Q96CX3 271 aaPredicted RBP2.84□□□□□ -1.96
UBR3-208ENST00000474426 TMEM147Q9BVK8 224 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 FXYD6Q9H0Q3 95 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 ST20Q9HBF5 79 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 PLIN4Q96Q06 1357 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 TOPAZ1Q8N9V7 1692 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 TRPM2O94759 1503 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 RAI1Q7Z5J4 1906 aaPredicted RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 LOC107986453A0A1B0GWG9 222 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 TMEM202A6NGA9 273 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 FAM90A26D6RGX4 464 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 F8W1H4 67 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 EPPINO95925 133 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 HOXB7P09629 217 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 LINC00869P0C866 280 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 CCL1P22362 96 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 GLIPR1P48060 266 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 POLR2JP52435 117 aaKnown RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 H2BFSP57053 126 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 C1DQ13901 141 aaKnown RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 SPRNQ5BIV9 151 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 TTC32Q5I0X7 151 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 PAGE3Q5JUK9 113 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 VAX1Q5SQQ9 334 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 Q6ZRU5 148 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 OR10G8Q8NGN5 311 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 OR8S1Q8NH09 359 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 NEUROG1Q92886 237 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 FGF14Q92915 247 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 SSBP3Q9BWW4 388 aaPredicted RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 PLA2G2FQ9BZM2 168 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 KLK5Q9Y337 293 aaPredicted RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 ARHGEF5Q12774 1597 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 TULP4Q9NRJ4 1543 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 DEPDC5O75140 1603 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 COL5A3P25940 1745 aaPredicted RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 TRAV5A0A0B4J249 113 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 UMAD1C9J7I0 102 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 SLC17A2O00624 439 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 GSTZ1O43708 216 aaPredicted RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 GRAP2O75791 330 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 ATP5G1P05496 136 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 GFERP55789 205 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 TECRLQ5HYJ1 363 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 OR4C11Q6IEV9 310 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 DPPA3Q6W0C5 159 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 PAQR4Q8N4S7 273 aaPredicted RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 KLHDC9Q8NEP7 349 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 VSTM2AQ8TAG5 236 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 SLC25A21Q9BQT8 299 aaPredicted RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 RPUSD1Q9UJJ7 312 aaKnown RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 TSC2P49815 1807 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 TRAV14DV4A0A0A6YYC5 116 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 DDTLA6NHG4 134 aaPredicted RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 H3BRM9 83 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 NUPR1O60356 82 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 PITX3O75364 302 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 CA2P00918 260 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 OR5AL1P0C617 328 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 OPRM1P35372 400 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 INPP1P49441 399 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 OSTNP61366 133 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 SLC25A11Q02978 314 aaKnown RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 MIDNQ504T8 468 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 CYP2R1Q6VVX0 501 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 MRPL55Q7Z7F7 128 aaKnown RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 PCP2Q8IVA1 136 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 LINC00311Q8N616 119 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 TMEM99Q8N816 258 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 OR2T6Q8NHC8 308 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 MS4A6EQ96DS6 147 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 FAM19A4Q96LR4 140 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 PBOV1Q9GZY1 135 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 TMEM242Q9NWH2 141 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 PEAK1Q9H792 1746 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 ZFC3H1O60293 1989 aaKnown RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 KANTRA0A1W2PQU2 76 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 TCRBV5S2A0A599 114 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 GRIFINA4D1Z8 144 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 A6NDN8 102 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 C8orf87E5RJ46 101 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 LYPD3O95274 346 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 CECR9P0C854 216 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 PPICP45877 212 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 ATP5G3P48201 142 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 LOXL1Q08397 574 aaPredicted RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 DAZ2Q13117 558 aaKnown RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 FKBP1CQ5VVH2 108 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 DAZ4Q86SG3 579 aaKnown RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 POP5Q969H6 163 aaKnown RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 ZNF799Q96GE5 643 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 PARLQ9H300 379 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 DAZ1Q9NQZ3 744 aaKnown RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 DAZ3Q9NR90 486 aaKnown RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 RBM12B-AS1Q9P1G2 102 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 MARCOQ9UEW3 520 aaPredicted RBP2.83□□□□□ -1.96
UBR3-208ENST00000474426 RGPD8O14715 1765 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms