RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 SPAG16Q8N0X2 631 aa14.59□□□□□ -0.07
CCDC171-206ENST00000474193 RNF152Q8N8N0 203 aa14.59□□□□□ -0.07
CCDC171-206ENST00000474193 OR13C8Q8NGS7 320 aa14.59□□□□□ -0.07
CCDC171-206ENST00000474193 DDB2Q92466 427 aa14.59□□□□□ -0.07
CCDC171-206ENST00000474193 HARBI1Q96MB7 349 aa14.59□□□□□ -0.07
CCDC171-206ENST00000474193 GPHA2Q96T91 129 aa14.59□□□□□ -0.07
CCDC171-206ENST00000474193 SLC2A9Q9NRM0 540 aa14.59□□□□□ -0.07
CCDC171-206ENST00000474193 ATP6V0E1O15342 81 aa14.58□□□□□ -0.08
CCDC171-206ENST00000474193 PI3P19957 117 aa14.58□□□□□ -0.08
CCDC171-206ENST00000474193 EIF4EBP1Q13541 118 aaPredicted RBP14.58□□□□□ -0.08
CCDC171-206ENST00000474193 TBC1D26Q86UD7 250 aa14.58□□□□□ -0.08
CCDC171-206ENST00000474193 TCTEX1D1Q8N7M0 179 aa14.58□□□□□ -0.08
CCDC171-206ENST00000474193 OSR1Q8TAX0 266 aaPredicted RBP14.58□□□□□ -0.08
CCDC171-206ENST00000474193 RBMXL1Q96E39 390 aaKnown RBP14.58□□□□□ -0.08
CCDC171-206ENST00000474193 TSC22D3Q99576 134 aa14.58□□□□□ -0.08
CCDC171-206ENST00000474193 SLC25A21Q9BQT8 299 aaPredicted RBP14.58□□□□□ -0.08
CCDC171-206ENST00000474193 AIFM2Q9BRQ8 373 aa14.58□□□□□ -0.08
CCDC171-206ENST00000474193 FBXL15Q9H469 300 aa14.58□□□□□ -0.08
CCDC171-206ENST00000474193 IGHV7-81A0A0B4J1V7 117 aa14.57□□□□□ -0.08
CCDC171-206ENST00000474193 MPPED1O15442 326 aa14.57□□□□□ -0.08
CCDC171-206ENST00000474193 UPK1BO75841 260 aa14.57□□□□□ -0.08
CCDC171-206ENST00000474193 PSMB8P28062 276 aa14.57□□□□□ -0.08
CCDC171-206ENST00000474193 RND3P61587 244 aa14.57□□□□□ -0.08
CCDC171-206ENST00000474193 TMEM177Q53S58 311 aa14.57□□□□□ -0.08
CCDC171-206ENST00000474193 MZT2BQ6NZ67 158 aa14.57□□□□□ -0.08
CCDC171-206ENST00000474193 C18orf65Q6ZTR6 163 aa14.57□□□□□ -0.08
CCDC171-206ENST00000474193 OR5M8Q8NGP6 311 aa14.57□□□□□ -0.08
CCDC171-206ENST00000474193 P2RX4Q99571 388 aa14.57□□□□□ -0.08
CCDC171-206ENST00000474193 AURKAIP1Q9NWT8 199 aaPredicted RBP14.57□□□□□ -0.08
CCDC171-206ENST00000474193 METTL1Q9UBP6 276 aaKnown RBP14.57□□□□□ -0.08
CCDC171-206ENST00000474193 GPR132Q9UNW8 380 aa14.57□□□□□ -0.08
CCDC171-206ENST00000474193 TGP01266 2768 aa14.56□□□□□ -0.08
CCDC171-206ENST00000474193 TEX13DA0A0J9YY54 714 aaPredicted RBP14.56□□□□□ -0.08
CCDC171-206ENST00000474193 RBFOX2O43251 390 aaKnown RBP eCLIP14.56□□□□□ -0.08
CCDC171-206ENST00000474193 LYRM1O43325 122 aa14.56□□□□□ -0.08
CCDC171-206ENST00000474193 SPDEFO95238 335 aa14.56□□□□□ -0.08
CCDC171-206ENST00000474193 HRASP01112 189 aa14.56□□□□□ -0.08
CCDC171-206ENST00000474193 F2RP25116 425 aa14.56□□□□□ -0.08
CCDC171-206ENST00000474193 CFHR3Q02985 330 aa14.56□□□□□ -0.08
CCDC171-206ENST00000474193 RBMS2Q15434 407 aaKnown RBP14.56□□□□□ -0.08
CCDC171-206ENST00000474193 VMA21Q3ZAQ7 101 aa14.56□□□□□ -0.08
CCDC171-206ENST00000474193 ETV3LQ6ZN32 361 aa14.56□□□□□ -0.08
CCDC171-206ENST00000474193 C4orf3Q8WVX3 66 aa14.56□□□□□ -0.08
CCDC171-206ENST00000474193 UBE2E2Q96LR5 201 aa14.56□□□□□ -0.08
CCDC171-206ENST00000474193 VSIG4Q9Y279 399 aa14.56□□□□□ -0.08
CCDC171-206ENST00000474193 G3V318 75 aa14.55□□□□□ -0.08
CCDC171-206ENST00000474193 B3GALNT1O75752 331 aa14.55□□□□□ -0.08
CCDC171-206ENST00000474193 HPRT1P00492 218 aa14.55□□□□□ -0.08
CCDC171-206ENST00000474193 SERPINE2P07093 398 aa14.55□□□□□ -0.08
CCDC171-206ENST00000474193 CX3CL1P78423 397 aa14.55□□□□□ -0.08
CCDC171-206ENST00000474193 ECSCRQ19T08 205 aa14.55□□□□□ -0.08
CCDC171-206ENST00000474193 RAX2Q96IS3 184 aa14.55□□□□□ -0.08
CCDC171-206ENST00000474193 CLCC1Q96S66 551 aa14.55□□□□□ -0.08
CCDC171-206ENST00000474193 A0A1W2PN81 502 aa14.54□□□□□ -0.08
CCDC171-206ENST00000474193 PPIFP30405 207 aaKnown RBP14.54□□□□□ -0.08
CCDC171-206ENST00000474193 CHRNA7P36544 502 aa14.54□□□□□ -0.08
CCDC171-206ENST00000474193 RAB9AP51151 201 aa14.54□□□□□ -0.08
CCDC171-206ENST00000474193 CCR6P51684 374 aa14.54□□□□□ -0.08
CCDC171-206ENST00000474193 DEFA1P59665 94 aa14.54□□□□□ -0.08
CCDC171-206ENST00000474193 DEFA3P59666 94 aa14.54□□□□□ -0.08
CCDC171-206ENST00000474193 PSG5Q15238 335 aa14.54□□□□□ -0.08
CCDC171-206ENST00000474193 DEFB121Q5J5C9 76 aa14.54□□□□□ -0.08
CCDC171-206ENST00000474193 ZNF562Q6V9R5 426 aa14.54□□□□□ -0.08
CCDC171-206ENST00000474193 TMED4Q7Z7H5 227 aa14.54□□□□□ -0.08
CCDC171-206ENST00000474193 PPP1R27Q86WC6 154 aa14.54□□□□□ -0.08
CCDC171-206ENST00000474193 SGPP2Q8IWX5 399 aa14.54□□□□□ -0.08
CCDC171-206ENST00000474193 MRGPRFQ96AM1 343 aa14.54□□□□□ -0.08
CCDC171-206ENST00000474193 DUX3Q96PT4 197 aa14.54□□□□□ -0.08
CCDC171-206ENST00000474193 RTBDNQ9BSG5 229 aaPredicted RBP14.54□□□□□ -0.08
CCDC171-206ENST00000474193 C5orf66Q9H5L9 145 aa14.54□□□□□ -0.08
CCDC171-206ENST00000474193 FAM212BQ9NTI7 297 aaPredicted RBP14.54□□□□□ -0.08
CCDC171-206ENST00000474193 FOXA2Q9Y261 457 aaPredicted RBP14.54□□□□□ -0.08
CCDC171-206ENST00000474193 KCNIP3Q9Y2W7 256 aa14.54□□□□□ -0.08
CCDC171-206ENST00000474193 C3orf85A0A1B0GTC6 90 aa14.53□□□□□ -0.08
CCDC171-206ENST00000474193 PLA2G10O15496 165 aa14.53□□□□□ -0.08
CCDC171-206ENST00000474193 SLC25A17O43808 307 aa14.53□□□□□ -0.08
CCDC171-206ENST00000474193 CREBL2O60519 120 aaPredicted RBP14.53□□□□□ -0.08
CCDC171-206ENST00000474193 RAMP3O60896 148 aa14.53□□□□□ -0.08
CCDC171-206ENST00000474193 CNIH1O95406 144 aa14.53□□□□□ -0.08
CCDC171-206ENST00000474193 IGLV1-40P01703 118 aa14.53□□□□□ -0.08
CCDC171-206ENST00000474193 AKR1C4P17516 323 aa14.53□□□□□ -0.08
CCDC171-206ENST00000474193 LPAR6P43657 344 aa14.53□□□□□ -0.08
CCDC171-206ENST00000474193 TAS2R31P59538 309 aa14.53□□□□□ -0.08
CCDC171-206ENST00000474193 ERVK-16P61578 105 aa14.53□□□□□ -0.08
CCDC171-206ENST00000474193 DCTN2Q13561 401 aaKnown RBP14.53□□□□□ -0.08
CCDC171-206ENST00000474193 UNQ5815/PRO19632Q6UWF5 114 aa14.53□□□□□ -0.08
CCDC171-206ENST00000474193 MINDY2Q8NBR6 621 aa14.53□□□□□ -0.08
CCDC171-206ENST00000474193 OR11H1Q8NG94 326 aa14.53□□□□□ -0.08
CCDC171-206ENST00000474193 VSTM2AQ8TAG5 236 aa14.53□□□□□ -0.08
CCDC171-206ENST00000474193 PLEKHA2Q9HB19 425 aa14.53□□□□□ -0.08
CCDC171-206ENST00000474193 COMMD9Q9P000 198 aa14.53□□□□□ -0.08
CCDC171-206ENST00000474193 H0Y980 276 aa14.52□□□□□ -0.09
CCDC171-206ENST00000474193 NDUFB6O95139 128 aa14.52□□□□□ -0.09
CCDC171-206ENST00000474193 NQO2P16083 231 aa14.52□□□□□ -0.09
CCDC171-206ENST00000474193 HOXD3P31249 432 aaPredicted RBP14.52□□□□□ -0.09
CCDC171-206ENST00000474193 UBE2KP61086 200 aa14.52□□□□□ -0.09
CCDC171-206ENST00000474193 ASAH1Q13510 395 aa14.52□□□□□ -0.09
CCDC171-206ENST00000474193 DEFB136Q30KP8 78 aa14.52□□□□□ -0.09
CCDC171-206ENST00000474193 AKIRIN2Q53H80 203 aa14.52□□□□□ -0.09
CCDC171-206ENST00000474193 C9orf66Q5T8R8 295 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms