RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 IL6RP08887 468 aaPredicted RBP13.76□□□□□ -0.21
UPF3A-203ENST00000474056 ELK1P19419 428 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 GNRHRP30968 328 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 RPL27AP46776 148 aaKnown RBP13.76□□□□□ -0.21
UPF3A-203ENST00000474056 RORCP51449 518 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 ZNF45Q02386 682 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 CD69Q07108 199 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 C11orf87Q6NUJ2 197 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 ZNF343Q6P1L6 599 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 DHRS11Q6UWP2 260 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 SNX29P2Q8IUI4 249 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 TTC9CQ8N5M4 171 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 OR5H2Q8NGV7 314 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 OR51H1Q8NH63 302 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 MOB3AQ96BX8 217 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 USMG5Q96IX5 58 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 FXYD6Q9H0Q3 95 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 COL7A1Q02388 2944 aa13.75□□□□□ -0.21
UPF3A-203ENST00000474056 TRBV9A0A0B4J1U6 114 aa13.75□□□□□ -0.21
UPF3A-203ENST00000474056 A0A1B0GW64 132 aa13.75□□□□□ -0.21
UPF3A-203ENST00000474056 RBFOX2O43251 390 aaKnown RBP eCLIP13.75□□□□□ -0.21
UPF3A-203ENST00000474056 MYOD1P15172 320 aa13.75□□□□□ -0.21
UPF3A-203ENST00000474056 ZP3P21754 424 aa13.75□□□□□ -0.21
UPF3A-203ENST00000474056 HLA-DMAP28067 261 aa13.75□□□□□ -0.21
UPF3A-203ENST00000474056 HRH1P35367 487 aa13.75□□□□□ -0.21
UPF3A-203ENST00000474056 TAS2R46P59540 309 aa13.75□□□□□ -0.21
UPF3A-203ENST00000474056 AADACL3Q5VUY0 350 aa13.75□□□□□ -0.21
UPF3A-203ENST00000474056 GPR107Q5VW38 600 aa13.75□□□□□ -0.21
UPF3A-203ENST00000474056 C19orf35Q6ZS72 473 aa13.75□□□□□ -0.21
UPF3A-203ENST00000474056 LYSMD2Q8IV50 215 aa13.75□□□□□ -0.21
UPF3A-203ENST00000474056 MRPS26Q9BYN8 205 aaKnown RBP13.75□□□□□ -0.21
UPF3A-203ENST00000474056 AKIP1Q9NQ31 210 aa13.75□□□□□ -0.21
UPF3A-203ENST00000474056 BET1LQ9NYM9 111 aa13.75□□□□□ -0.21
UPF3A-203ENST00000474056 PEF1Q9UBV8 284 aaKnown RBP13.75□□□□□ -0.21
UPF3A-203ENST00000474056 SMIM31A0A1B0GVY4 71 aa13.74□□□□□ -0.21
UPF3A-203ENST00000474056 HPRT1P00492 218 aa13.74□□□□□ -0.21
UPF3A-203ENST00000474056 SPNP16150 400 aa13.74□□□□□ -0.21
UPF3A-203ENST00000474056 MAS1LP35410 378 aa13.74□□□□□ -0.21
UPF3A-203ENST00000474056 RHOGP84095 191 aa13.74□□□□□ -0.21
UPF3A-203ENST00000474056 OR4A47Q6IF82 309 aa13.74□□□□□ -0.21
UPF3A-203ENST00000474056 HAPLN4Q86UW8 402 aa13.74□□□□□ -0.21
UPF3A-203ENST00000474056 FYTTD1Q96QD9 318 aaKnown RBP13.74□□□□□ -0.21
UPF3A-203ENST00000474056 ADAM30Q9UKF2 790 aa13.74□□□□□ -0.21
UPF3A-203ENST00000474056 FAM223BA6NKX1 122 aa13.73□□□□□ -0.21
UPF3A-203ENST00000474056 FAM25AB3EWG3 89 aa13.73□□□□□ -0.21
UPF3A-203ENST00000474056 FAM25CB3EWG5 89 aa13.73□□□□□ -0.21
UPF3A-203ENST00000474056 FAM25GB3EWG6 89 aa13.73□□□□□ -0.21
UPF3A-203ENST00000474056 S1PR2O95136 353 aa13.73□□□□□ -0.21
UPF3A-203ENST00000474056 ZNF735P0CB33 412 aa13.73□□□□□ -0.21
UPF3A-203ENST00000474056 ALDH3B2P48448 385 aa13.73□□□□□ -0.21
UPF3A-203ENST00000474056 TAS2R31P59538 309 aa13.73□□□□□ -0.21
UPF3A-203ENST00000474056 RPL8P62917 257 aaKnown RBP13.73□□□□□ -0.21
UPF3A-203ENST00000474056 EXOSC2Q13868 293 aaKnown RBP13.73□□□□□ -0.21
UPF3A-203ENST00000474056 KLF5Q13887 457 aaPredicted RBP13.73□□□□□ -0.21
UPF3A-203ENST00000474056 MZT2AQ6P582 158 aa13.73□□□□□ -0.21
UPF3A-203ENST00000474056 FAM223AQ8IWN6 122 aa13.73□□□□□ -0.21
UPF3A-203ENST00000474056 OR6Q1Q8NGQ2 317 aa13.73□□□□□ -0.21
UPF3A-203ENST00000474056 OR4C12Q96R67 309 aa13.73□□□□□ -0.21
UPF3A-203ENST00000474056 HRASLSQ9HDD0 168 aa13.73□□□□□ -0.21
UPF3A-203ENST00000474056 TRAV3A0A0B4J244 114 aa13.72□□□□□ -0.21
UPF3A-203ENST00000474056 CGB1A6NKQ9 187 aa13.72□□□□□ -0.21
UPF3A-203ENST00000474056 OR2J3O76001 311 aa13.72□□□□□ -0.21
UPF3A-203ENST00000474056 RLN1P04808 185 aa13.72□□□□□ -0.21
UPF3A-203ENST00000474056 AREGP15514 252 aa13.72□□□□□ -0.21
UPF3A-203ENST00000474056 NQO2P16083 231 aa13.72□□□□□ -0.21
UPF3A-203ENST00000474056 SYNJ2BPP57105 145 aa13.72□□□□□ -0.21
UPF3A-203ENST00000474056 POU2AF1Q16633 256 aa13.72□□□□□ -0.21
UPF3A-203ENST00000474056 GPR141Q7Z602 305 aa13.72□□□□□ -0.21
UPF3A-203ENST00000474056 SLC25A42Q86VD7 318 aa13.72□□□□□ -0.21
UPF3A-203ENST00000474056 OR6F1Q8NGZ6 308 aa13.72□□□□□ -0.21
UPF3A-203ENST00000474056 OR4A5Q8NH83 315 aa13.72□□□□□ -0.21
UPF3A-203ENST00000474056 BORCS5Q969J3 196 aa13.72□□□□□ -0.21
UPF3A-203ENST00000474056 ELOVL1Q9BW60 279 aa13.72□□□□□ -0.21
UPF3A-203ENST00000474056 SCPEP1Q9HB40 452 aa13.72□□□□□ -0.21
UPF3A-203ENST00000474056 SLC2A9Q9NRM0 540 aa13.72□□□□□ -0.21
UPF3A-203ENST00000474056 ZNF257Q9Y2Q1 563 aa13.72□□□□□ -0.21
UPF3A-203ENST00000474056 DPPA5A6NC42 116 aa13.71□□□□□ -0.21
UPF3A-203ENST00000474056 NPIPB5A8MRT5 1133 aa13.71□□□□□ -0.21
UPF3A-203ENST00000474056 PGLYRP1O75594 196 aaPredicted RBP13.71□□□□□ -0.21
UPF3A-203ENST00000474056 GP9P14770 177 aa13.71□□□□□ -0.21
UPF3A-203ENST00000474056 ZNF182P17025 639 aaPredicted RBP13.71□□□□□ -0.21
UPF3A-203ENST00000474056 HLA-GP17693 338 aa13.71□□□□□ -0.21
UPF3A-203ENST00000474056 RCVRNP35243 200 aa13.71□□□□□ -0.21
UPF3A-203ENST00000474056 ATP5G2Q06055 141 aa13.71□□□□□ -0.21
UPF3A-203ENST00000474056 RPEL1Q2QD12 228 aa13.71□□□□□ -0.21
UPF3A-203ENST00000474056 RNASE12Q5GAN4 147 aaKnown RBP13.71□□□□□ -0.21
UPF3A-203ENST00000474056 AP3S1Q92572 193 aa13.71□□□□□ -0.21
UPF3A-203ENST00000474056 AIFM2Q9BRQ8 373 aa13.71□□□□□ -0.21
UPF3A-203ENST00000474056 RSRP1Q9BUV0 290 aa13.71□□□□□ -0.21
UPF3A-203ENST00000474056 PLEKHA2Q9HB19 425 aa13.71□□□□□ -0.21
UPF3A-203ENST00000474056 TMEM140Q9NV12 185 aa13.71□□□□□ -0.21
UPF3A-203ENST00000474056 BMPR1BO00238 502 aa13.7□□□□□ -0.22
UPF3A-203ENST00000474056 GPR31O00270 319 aa13.7□□□□□ -0.22
UPF3A-203ENST00000474056 UPK2O00526 184 aa13.7□□□□□ -0.22
UPF3A-203ENST00000474056 RPA2P15927 270 aa13.7□□□□□ -0.22
UPF3A-203ENST00000474056 TSPAN5P62079 268 aa13.7□□□□□ -0.22
UPF3A-203ENST00000474056 C15orf32Q32M92 178 aa13.7□□□□□ -0.22
UPF3A-203ENST00000474056 VAX1Q5SQQ9 334 aa13.7□□□□□ -0.22
UPF3A-203ENST00000474056 NECAP1Q8NC96 275 aa13.7□□□□□ -0.22
UPF3A-203ENST00000474056 DMBX1Q8NFW5 382 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms