RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 LGI3Q8N145 548 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 C12orf45Q8N5I9 185 aaPredicted RBP6.05□□□□□ -1.44
CCDC93-207ENST00000474006 Q8N6K4 173 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 UXS1Q8NBZ7 420 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 NPBQ8NG41 125 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 COQ8AQ8NI60 647 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 LHFPL5Q8TAF8 219 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 OSR1Q8TAX0 266 aaPredicted RBP6.05□□□□□ -1.44
CCDC93-207ENST00000474006 MITD1Q8WV92 249 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 SSMEM1Q8WWF3 244 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 R3HDM4Q96D70 268 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 TSNAXQ99598 290 aaKnown RBP6.05□□□□□ -1.44
CCDC93-207ENST00000474006 AIFM2Q9BRQ8 373 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 GPN1Q9HCN4 374 aaPredicted RBP6.05□□□□□ -1.44
CCDC93-207ENST00000474006 YLPM1P49750 1951 aaKnown RBP6.04□□□□□ -1.44
CCDC93-207ENST00000474006 A0A0B4J293 547 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 A0A0B4J2A0 478 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 NCBP2LA6PVI3 153 aaKnown RBP6.04□□□□□ -1.44
CCDC93-207ENST00000474006 CREBL2O60519 120 aaPredicted RBP6.04□□□□□ -1.44
CCDC93-207ENST00000474006 HRASP01112 189 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 IGKV1-5P01602 117 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 IGLV2-23P01705 113 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 FAM157CP0CG43 387 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 SRPXP78539 464 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 PSG5Q15238 335 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 TMEM268Q5VZI3 342 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 Q6ZNX1 250 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 SSX9Q7RTT3 188 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 TMEM219Q86XT9 240 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 LRTM2Q8N967 370 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 TEX45Q8NA69 505 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 DMBX1Q8NFW5 382 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 OR5R1Q8NH85 324 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 ZNF418Q8TF45 676 aaPredicted RBP6.04□□□□□ -1.44
CCDC93-207ENST00000474006 RBPMSQ93062 196 aaKnown RBP6.04□□□□□ -1.44
CCDC93-207ENST00000474006 IL22RA2Q969J5 263 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 SEC22AQ96IW7 307 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 HARBI1Q96MB7 349 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 RBM14Q96PK6 669 aaKnown RBP6.04□□□□□ -1.44
CCDC93-207ENST00000474006 DUX5Q96PT3 197 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 PHB2Q99623 299 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 OR51J1Q9H342 316 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 COMMD9Q9P000 198 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 SHPKQ9UHJ6 478 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 PITPNC1Q9UKF7 332 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 TCF19Q9Y242 345 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 ALG5Q9Y673 324 aa6.04□□□□□ -1.44
CCDC93-207ENST00000474006 DOCK11Q5JSL3 2073 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 TRAV3A0A0B4J244 114 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 C7orf66A4D0T2 115 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 BTBD17A6NE02 478 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 DBX1A6NMT0 343 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 MARCH11A6NNE9 402 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 UPK2O00526 184 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 FCN1O00602 326 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 RRHO14718 337 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 NBR2O15453 112 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 SSNA1O43805 119 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 SLC25A17O43808 307 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 ADAP1O75689 374 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 ATG12O94817 140 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 OR2F2O95006 317 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 OR2A4O95047 310 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 CRYGBP07316 175 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 IL6RP08887 468 aaPredicted RBP6.03□□□□□ -1.44
CCDC93-207ENST00000474006 HOXB5P09067 269 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 UBE2KP61086 200 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 PJVKQ0ZLH3 352 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 MMDQ15546 238 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 POU2AF1Q16633 256 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 MLANAQ16655 118 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 IZUMO4Q1ZYL8 232 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 PRR31Q5SQ13 230 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 OR4A47Q6IF82 309 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 Q6ZRM9 215 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 H2BFWTQ7Z2G1 175 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 CADM3Q8N126 398 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 TMEM86BQ8N661 226 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 SLC35G3Q8N808 338 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 OR8H1Q8NGG4 311 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 LSM10Q969L4 123 aaKnown RBP6.03□□□□□ -1.44
CCDC93-207ENST00000474006 GPR146Q96CH1 333 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 RRNAD1Q96FB5 475 aaKnown RBP6.03□□□□□ -1.44
CCDC93-207ENST00000474006 OR2A7Q96R45 310 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 CLCC1Q96S66 551 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 RASL11BQ9BPW5 248 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 SLC25A33Q9BSK2 321 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 CHIAQ9BZP6 476 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 FBXL15Q9H469 300 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 RANBP3Q9H6Z4 567 aaPredicted RBP6.03□□□□□ -1.44
CCDC93-207ENST00000474006 ESM1Q9NQ30 184 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 C1RLQ9NZP8 487 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 KIAA1456Q9P272 454 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 METTL1Q9UBP6 276 aaKnown RBP6.03□□□□□ -1.44
CCDC93-207ENST00000474006 SIGLEC9Q9Y336 463 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 POMT1Q9Y6A1 747 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 DSCAML1Q8TD84 2053 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 MAST4O15021 2626 aa6.03□□□□□ -1.44
CCDC93-207ENST00000474006 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.03□□□□□ -1.442e-7■■■■■ 28
CCDC93-207ENST00000474006 MXRA5Q9NR99 2828 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms