RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 POLEQ07864 2286 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 YPEL1O60688 119 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 WISP2O76076 250 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 GRPP07492 148 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 C1QTNF9P0C862 333 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 LGALS4P56470 323 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 RPL30P62888 115 aaKnown RBP5.11□□□□□ -1.59
HERC4-209ENST00000473533 TREML4Q6UXN2 200 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 ACP7Q6ZNF0 438 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 TMEM251Q8N6I4 163 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 C1orf162Q8NEQ5 155 aaPredicted RBP5.11□□□□□ -1.59
HERC4-209ENST00000473533 OR52L2PQ8NGH6 319 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 GATAD1Q8WUU5 269 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 TMEM190Q8WZ59 177 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 RBM14Q96PK6 669 aaKnown RBP5.11□□□□□ -1.59
HERC4-209ENST00000473533 YPEL2Q96QA6 119 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 HSPB9Q9BQS6 159 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 GGTLC1Q9BX51 225 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 COMMD5Q9GZQ3 224 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 TRAV38-1A0A0B4J264 116 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 PINLYPA6NC86 204 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 CRYAAP02489 173 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 SFTPCP11686 197 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 ACP1P24666 158 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 TLE1Q04724 770 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 ZNF718Q3SXZ3 478 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 SPATA46Q5T0L3 261 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 CDCP2Q5VXM1 449 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 MMD2Q8IY49 270 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 PNKDQ8N490 385 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 SLC25A40Q8TBP6 338 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 ZDHHC16Q969W1 377 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 PLEKHA3Q9HB20 300 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 GNG12Q9UBI6 72 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 PRNDQ9UKY0 176 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 PSG11Q9UQ72 335 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 SNURFLB1AK76 121 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 MGST3O14880 152 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 ZNF253O75346 499 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 AMY1AP04745 511 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 BTF3P20290 206 aaKnown RBP5.1□□□□□ -1.59
HERC4-209ENST00000473533 NPPCP23582 126 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 NPY1RP25929 384 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 DUTP33316 252 aaKnown RBP5.1□□□□□ -1.59
HERC4-209ENST00000473533 MAGEA5P43359 124 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 SPINK14Q6IE38 97 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 GCSAMQ8N6F7 178 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 TMEM178AQ8NBL3 297 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 OR5B3Q8NH48 314 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 OCC1Q8TAD7 63 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 MRGPRDQ8TDS7 321 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 BORCS7Q96B45 105 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 EAF1Q96JC9 268 aaPredicted RBP5.1□□□□□ -1.59
HERC4-209ENST00000473533 MRPL32Q9BYC8 188 aaKnown RBP5.1□□□□□ -1.59
HERC4-209ENST00000473533 OR2J1Q9GZK6 312 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 TRAV39A0A0B4J263 110 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 HELTA6NFD8 242 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 FCGR3BO75015 233 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 IL6RP08887 468 aaPredicted RBP5.1□□□□□ -1.59
HERC4-209ENST00000473533 VDAC2P45880 294 aaPredicted RBP5.1□□□□□ -1.59
HERC4-209ENST00000473533 RPL31P62899 125 aaKnown RBP5.1□□□□□ -1.59
HERC4-209ENST00000473533 TPTE2P1Q5T6R2 138 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 SLC24A4Q8NFF2 622 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 KCNS1Q96KK3 526 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 MRPL27Q9P0M9 148 aaKnown RBP5.1□□□□□ -1.59
HERC4-209ENST00000473533 KMT2EQ8IZD2 1858 aa5.1□□□□□ -1.59
HERC4-209ENST00000473533 SCO2A0A1W2PP80 73 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 ZNF503-AS2A6NEH8 195 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 DIRC3C9JPN6 131 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 ISLRO14498 428 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 TIMM8AO60220 97 aaPredicted RBP5.09□□□□□ -1.59
HERC4-209ENST00000473533 SERF1AO75920 110 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 SP1P08047 785 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 ZNF883P0CG24 379 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 G0S2P27469 103 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 MEOX1P50221 254 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 HSPE1P61604 102 aaKnown RBP5.09□□□□□ -1.59
HERC4-209ENST00000473533 CX3CL1P78423 397 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 AESQ08117 197 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 WDR86Q86TI4 376 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 TMEM256Q8N2U0 113 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 WFIKKN1Q96NZ8 548 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 MGST2Q99735 147 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 ZNF331Q9NQX6 463 aaPredicted RBP5.09□□□□□ -1.59
HERC4-209ENST00000473533 SLC35D1Q9NTN3 355 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 NAT8BQ9UHF3 227 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 TCF19Q9Y242 345 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 FOXA2Q9Y261 457 aaPredicted RBP5.09□□□□□ -1.59
HERC4-209ENST00000473533 LSM4Q9Y4Z0 139 aaKnown RBP5.09□□□□□ -1.59
HERC4-209ENST00000473533 TRGV5A0A0B4J1U4 118 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 A0A1W2PRE2 83 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 M0R1X1 148 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 LRP11Q86VZ4 500 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 OR2D3Q8NGH3 330 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 TMEM208Q9BTX3 173 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 MS4A5Q9H3V2 200 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 C12orf49Q9H741 205 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 CDC42EP3Q9UKI2 254 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 ZFP30Q9Y2G7 519 aa5.09□□□□□ -1.59
HERC4-209ENST00000473533 ZNF257Q9Y2Q1 563 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms