RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 IL3RAP26951 378 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 MAS1LP35410 378 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 OPRK1P41145 380 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 CEBPGP53567 150 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 HSPE1P61604 102 aaKnown RBP6.28□□□□□ -1.4
CCDC171-205ENST00000472806 EFNB3Q15768 340 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 TMEM249Q2WGJ8 235 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 RPL39P5Q59GN2 51 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 CT45A1Q5HYN5 189 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 NCMAPQ5T1S8 102 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 SLC25A48Q6ZT89 311 aaKnown RBP6.28□□□□□ -1.4
CCDC171-205ENST00000472806 C8orf31Q8N9H6 132 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 ZNF439Q8NDP4 499 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 DEFB108BQ8NET1 73 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 CT45A3Q8NHU0 189 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 RAB1CQ92928 201 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 HIST1H2BAQ96A08 127 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 ZNF714Q96N38 554 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 TXNDC17Q9BRA2 123 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 CTDSP1Q9GZU7 261 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 SLC35D1Q9NTN3 355 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 TMEM106BQ9NUM4 274 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 ZNF257Q9Y2Q1 563 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 GTF3C1Q12789 2109 aa6.28□□□□□ -1.4
CCDC171-205ENST00000472806 WDR87Q6ZQQ6 2873 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 BDP1A6H8Y1 2624 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 A0A1W2PPH5 198 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 A0A1W2PPV4 95 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 TMEM178BH3BS89 294 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 MT-CO2P00403 227 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 THBDP07204 575 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 RAB5AP20339 215 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 MDKP21741 143 aaPredicted RBP6.27□□□□□ -1.41
CCDC171-205ENST00000472806 NPY1RP25929 384 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 APOBEC3AP31941 199 aaPredicted RBP6.27□□□□□ -1.41
CCDC171-205ENST00000472806 VDAC2P45880 294 aaPredicted RBP6.27□□□□□ -1.41
CCDC171-205ENST00000472806 CDC34P49427 236 aaPredicted RBP6.27□□□□□ -1.41
CCDC171-205ENST00000472806 ZNF134P52741 427 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 RPL31P62899 125 aaKnown RBP6.27□□□□□ -1.41
CCDC171-205ENST00000472806 CCL8P80075 99 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 HOXA4Q00056 320 aaPredicted RBP6.27□□□□□ -1.41
CCDC171-205ENST00000472806 MLANAQ16655 118 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 SPRNQ5BIV9 151 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 OR4A47Q6IF82 309 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 FAM53AQ6NSI3 398 aaPredicted RBP6.27□□□□□ -1.41
CCDC171-205ENST00000472806 HEPN1Q6WQI6 88 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 SSX9Q7RTT3 188 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 MRPL41Q8IXM3 137 aaKnown RBP6.27□□□□□ -1.41
CCDC171-205ENST00000472806 LINC00311Q8N616 119 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 FAM216BQ8N7L0 139 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 CYB561D1Q8N8Q1 229 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 OR4A5Q8NH83 315 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 VSTM2AQ8TAG5 236 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 OSR1Q8TAX0 266 aaPredicted RBP6.27□□□□□ -1.41
CCDC171-205ENST00000472806 NANPQ8TBE9 248 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 TMEM186Q96B77 213 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 RHOVQ96L33 236 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 C20orf24Q9BUV8 137 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 SAV1Q9H4B6 383 aaPredicted RBP6.27□□□□□ -1.41
CCDC171-205ENST00000472806 NPVFQ9HCQ7 196 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 TMEM242Q9NWH2 141 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 KAAG1Q9UBP8 84 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 SH3BGRL2Q9UJC5 107 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 TCF19Q9Y242 345 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 RFNGQ9Y644 331 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 A0A0C4DFX4 3053 aa6.27□□□□□ -1.41
CCDC171-205ENST00000472806 TRBV23-1A0A0A0MS06 115 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 MEX3AA1L020 520 aaKnown RBP6.26□□□□□ -1.41
CCDC171-205ENST00000472806 ZNF727A8MUV8 499 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 SEC14L6B5MCN3 397 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 SLC31A2O15432 143 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 PROP1O75360 226 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 FSTL3O95633 263 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 SELLP14151 372 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 GNG10P50151 68 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 MEF2BQ02080 365 aaPredicted RBP6.26□□□□□ -1.41
CCDC171-205ENST00000472806 KLRB1Q12918 225 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 ZNF726P1Q15940 193 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 FBXL19-AS1Q494R0 122 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 FAM201AQ5SY85 155 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 ADAM5Q6NVV9 412 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 ACSM6Q6P461 480 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 ZNF833PQ6ZTB9 187 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 PDPNQ86YL7 162 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 C1QL4Q86Z23 238 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 RPP25LQ8N5L8 163 aaKnown RBP6.26□□□□□ -1.41
CCDC171-205ENST00000472806 SLC24A4Q8NFF2 622 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 OR5B3Q8NH48 314 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 CA5BP1Q8WTZ4 195 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 TNFRSF14Q92956 283 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 RNASE6Q93091 150 aaKnown RBP6.26□□□□□ -1.41
CCDC171-205ENST00000472806 PLPPR2Q96GM1 343 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 TCEAL7Q9BRU2 100 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 KRTAP4-11Q9BYQ6 195 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 VSIRQ9H7M9 311 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 PLEKHA3Q9HB20 300 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 TMEM14BQ9NUH8 114 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 BET1LQ9NYM9 111 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 NAT8Q9UHE5 227 aa6.26□□□□□ -1.41
CCDC171-205ENST00000472806 OR51B2Q9Y5P1 312 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms