RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 KLF5Q13887 457 aaPredicted RBP2.65□□□□□ -1.99
XRN1-209ENST00000472625 PSG5Q15238 335 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 RCN1Q15293 331 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 P2RY14Q15391 338 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 TRAM1Q15629 374 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 UTF1Q5T230 341 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 ZNF343Q6P1L6 599 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 ADAMTSL5Q6ZMM2 481 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 ODF3L1Q8IXM7 274 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 CBR4Q8N4T8 237 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 NECAP1Q8NC96 275 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 ADAD2Q8NCV1 583 aaKnown RBP2.65□□□□□ -1.99
XRN1-209ENST00000472625 OR4A4PQ8NGN8 299 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 UBALD1Q8TB05 177 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 SETD6Q8TBK2 473 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 MARC2Q969Z3 335 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 FAM46BQ96A09 425 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 TMEM80Q96HE8 168 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 MS4A10Q96PG2 267 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 DERL3Q96Q80 235 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 NEURL2Q9BR09 285 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 MND1Q9BWT6 205 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 GGTLC1Q9BX51 225 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 TM2D1Q9BX74 207 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 MFFQ9GZY8 342 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 ALX4Q9H161 411 aaPredicted RBP2.65□□□□□ -1.99
XRN1-209ENST00000472625 VCXQ9H320 206 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 PLEKHA2Q9HB19 425 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 ZC4H2Q9NQZ6 224 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 SLC35D1Q9NTN3 355 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 THYN1Q9P016 225 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 HSF4Q9ULV5 492 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 TP53TG1Q9Y2A0 90 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 MRPS7Q9Y2R9 242 aaKnown RBP2.65□□□□□ -1.99
XRN1-209ENST00000472625 TENM2Q9NT68 2774 aa2.65□□□□□ -1.99
XRN1-209ENST00000472625 LOC102724200A0A096LPH7 203 aaPredicted RBP2.64□□□□□ -1.99
XRN1-209ENST00000472625 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.64□□□□□ -1.99
XRN1-209ENST00000472625 TRAV25A0A0B4J276 109 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 A0A1W2PP11 408 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 DPPA5A6NC42 116 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 A8MWP6 167 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 OR11H12B2RN74 326 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 E9PI62 339 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 M0R1X1 148 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 LGALS9O00182 355 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 UBE2CO00762 179 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 GGCTO75223 188 aaKnown RBP2.64□□□□□ -1.99
XRN1-209ENST00000472625 SCGNO76038 276 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 IGKV1-16P04430 117 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 CDK1P06493 297 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 HIST1H1BP16401 226 aaKnown RBP2.64□□□□□ -1.99
XRN1-209ENST00000472625 CELP19835 753 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 GADD45AP24522 165 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 BMI1P35226 326 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 MAS1LP35410 378 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 CEACAM6P40199 344 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 GTF2A1P52655 376 aaPredicted RBP2.64□□□□□ -1.99
XRN1-209ENST00000472625 ARPC4P59998 168 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 UBE2KP61086 200 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 ATP5G2Q06055 141 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 EXOSC2Q13868 293 aaKnown RBP2.64□□□□□ -1.99
XRN1-209ENST00000472625 GNMTQ14749 295 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 FAM106AQ4KMX7 169 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 HSD17B12Q53GQ0 312 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 RPL39P5Q59GN2 51 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 RBM48Q5RL73 367 aaKnown RBP2.64□□□□□ -1.99
XRN1-209ENST00000472625 THOC7Q6I9Y2 204 aaKnown RBP2.64□□□□□ -1.99
XRN1-209ENST00000472625 ZNF880Q6PDB4 577 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 RBPMS2Q6ZRY4 209 aaKnown RBP2.64□□□□□ -1.99
XRN1-209ENST00000472625 MMD2Q8IY49 270 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 SLC38A6Q8IZM9 456 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 CENPSQ8N2Z9 138 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 PACRGLQ8N7B6 248 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 PRR26Q8N8Z3 221 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 TEX45Q8NA69 505 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 OR56B1Q8NGI3 324 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 OR52B4Q8NGK2 314 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 OR10J5Q8NHC4 309 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 PYDC1Q8WXC3 89 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 GGHQ92820 318 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 PGLYRP3Q96LB9 341 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 CXorf58Q96LI9 332 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 GINS4Q9BRT9 223 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 AGMATQ9BSE5 352 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 FAM103A1Q9BTL3 118 aaKnown RBP2.64□□□□□ -1.99
XRN1-209ENST00000472625 BANF2Q9H503 90 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 SRD5A3Q9H8P0 318 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 PLEKHA3Q9HB20 300 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 PLGRKTQ9HBL7 147 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 AMBNQ9NP70 447 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 GAB2Q9UQC2 676 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 ZNF257Q9Y2Q1 563 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 PRELID3BQ9Y3B1 194 aa2.64□□□□□ -1.99
XRN1-209ENST00000472625 RBM7Q9Y580 266 aaKnown RBP2.64□□□□□ -1.99
XRN1-209ENST00000472625 PCLOQ9Y6V0 5065 aa2.63□□□□□ -1.99
XRN1-209ENST00000472625 SORL1Q92673 2214 aa2.63□□□□□ -1.99
XRN1-209ENST00000472625 TRAV8-7A0A075B6U6 113 aa2.63□□□□□ -1.99
XRN1-209ENST00000472625 TRBV7-1A0A0A6YYK4 115 aa2.63□□□□□ -1.99
XRN1-209ENST00000472625 KIR2DL5BA0A0G2JN68 375 aa2.63□□□□□ -1.99
XRN1-209ENST00000472625 KIR2DL5BA0A0G2JPC4 375 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms