RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 URM1Q9BTM9 101 aaKnown RBP13.92□□□□□ -0.18
SORT1-203ENST00000471996 C6orf62Q9GZU0 229 aaPredicted RBP13.92□□□□□ -0.18
SORT1-203ENST00000471996 TRBV6-7A0A0A0MS04 114 aa13.91□□□□□ -0.18
SORT1-203ENST00000471996 OR4C46A6NHA9 309 aa13.91□□□□□ -0.18
SORT1-203ENST00000471996 FOXI3A8MTJ6 420 aaPredicted RBP13.91□□□□□ -0.18
SORT1-203ENST00000471996 E7EUB6 86 aa13.91□□□□□ -0.18
SORT1-203ENST00000471996 FABP7O15540 132 aa13.91□□□□□ -0.18
SORT1-203ENST00000471996 BPNT1O95861 308 aa13.91□□□□□ -0.18
SORT1-203ENST00000471996 DHFRP00374 187 aa13.91□□□□□ -0.18
SORT1-203ENST00000471996 CD1AP06126 327 aa13.91□□□□□ -0.18
SORT1-203ENST00000471996 HIST1H1BP16401 226 aaKnown RBP13.91□□□□□ -0.18
SORT1-203ENST00000471996 TMEM50BP56557 158 aa13.91□□□□□ -0.18
SORT1-203ENST00000471996 IGSF11Q5DX21 431 aa13.91□□□□□ -0.18
SORT1-203ENST00000471996 LRRTM1Q86UE6 522 aa13.91□□□□□ -0.18
SORT1-203ENST00000471996 PQLC1Q8N2U9 271 aa13.91□□□□□ -0.18
SORT1-203ENST00000471996 CABLES2Q9BTV7 478 aa13.91□□□□□ -0.18
SORT1-203ENST00000471996 RBM7Q9Y580 266 aaKnown RBP13.91□□□□□ -0.18
SORT1-203ENST00000471996 IGHV3-35A0A0C4DH35 117 aa13.9□□□□□ -0.18
SORT1-203ENST00000471996 MFSD2BA6NFX1 497 aa13.9□□□□□ -0.18
SORT1-203ENST00000471996 DEFB4AO15263 64 aa13.9□□□□□ -0.18
SORT1-203ENST00000471996 ZNF735P0CB33 412 aa13.9□□□□□ -0.18
SORT1-203ENST00000471996 AREGP15514 252 aa13.9□□□□□ -0.18
SORT1-203ENST00000471996 CELP19835 753 aa13.9□□□□□ -0.18
SORT1-203ENST00000471996 ADMP35318 185 aa13.9□□□□□ -0.18
SORT1-203ENST00000471996 RPL27AP46776 148 aaKnown RBP13.9□□□□□ -0.18
SORT1-203ENST00000471996 APRG1Q8IVJ8 170 aa13.9□□□□□ -0.18
SORT1-203ENST00000471996 TMEM80Q96HE8 168 aa13.9□□□□□ -0.18
SORT1-203ENST00000471996 ARHGAP5-AS1Q96IT6 56 aa13.9□□□□□ -0.18
SORT1-203ENST00000471996 CXorf58Q96LI9 332 aa13.9□□□□□ -0.18
SORT1-203ENST00000471996 DCUN1D5Q9BTE7 237 aa13.9□□□□□ -0.18
SORT1-203ENST00000471996 ZNF436Q9C0F3 470 aaPredicted RBP13.9□□□□□ -0.18
SORT1-203ENST00000471996 OR51E2Q9H255 320 aa13.9□□□□□ -0.18
SORT1-203ENST00000471996 A0A1B0GW64 132 aa13.89□□□□□ -0.19
SORT1-203ENST00000471996 GPR183P32249 361 aa13.89□□□□□ -0.19
SORT1-203ENST00000471996 OR6M1Q8NGM8 313 aa13.89□□□□□ -0.19
SORT1-203ENST00000471996 OR4A5Q8NH83 315 aa13.89□□□□□ -0.19
SORT1-203ENST00000471996 PECRQ9BY49 303 aa13.89□□□□□ -0.19
SORT1-203ENST00000471996 IGLV11-55A0A075B6I3 123 aa13.88□□□□□ -0.19
SORT1-203ENST00000471996 DIRAS3O95661 229 aa13.88□□□□□ -0.19
SORT1-203ENST00000471996 CD37P11049 281 aa13.88□□□□□ -0.19
SORT1-203ENST00000471996 INSL4Q14641 139 aa13.88□□□□□ -0.19
SORT1-203ENST00000471996 PLET1Q6UQ28 207 aa13.88□□□□□ -0.19
SORT1-203ENST00000471996 VKORC1L1Q8N0U8 176 aa13.88□□□□□ -0.19
SORT1-203ENST00000471996 TMEM190Q8WZ59 177 aa13.88□□□□□ -0.19
SORT1-203ENST00000471996 PHYHIPQ92561 330 aa13.88□□□□□ -0.19
SORT1-203ENST00000471996 HRH4Q9H3N8 390 aa13.88□□□□□ -0.19
SORT1-203ENST00000471996 FCGR3BO75015 233 aa13.87□□□□□ -0.19
SORT1-203ENST00000471996 ZNF124Q15973 351 aa13.87□□□□□ -0.19
SORT1-203ENST00000471996 RBM48Q5RL73 367 aaKnown RBP13.87□□□□□ -0.19
SORT1-203ENST00000471996 ZNF575Q86XF7 245 aa13.87□□□□□ -0.19
SORT1-203ENST00000471996 ZNF502Q8TBZ5 544 aa13.87□□□□□ -0.19
SORT1-203ENST00000471996 OR2A7Q96R45 310 aa13.87□□□□□ -0.19
SORT1-203ENST00000471996 DAZ1Q9NQZ3 744 aaKnown RBP13.87□□□□□ -0.19
SORT1-203ENST00000471996 C8orf4Q9NR00 106 aa13.87□□□□□ -0.19
SORT1-203ENST00000471996 IGHV4-4A0A075B6R2 117 aa13.86□□□□□ -0.19
SORT1-203ENST00000471996 KBTBD11O94819 623 aa13.86□□□□□ -0.19
SORT1-203ENST00000471996 DEFA4P12838 97 aa13.86□□□□□ -0.19
SORT1-203ENST00000471996 MAS1LP35410 378 aa13.86□□□□□ -0.19
SORT1-203ENST00000471996 ARFRP1Q13795 201 aa13.86□□□□□ -0.19
SORT1-203ENST00000471996 ACSM3Q53FZ2 586 aa13.86□□□□□ -0.19
SORT1-203ENST00000471996 PLAC9Q5JTB6 97 aa13.86□□□□□ -0.19
SORT1-203ENST00000471996 NR2C2APQ86WQ0 139 aa13.86□□□□□ -0.19
SORT1-203ENST00000471996 ZNF555Q8NEP9 628 aa13.86□□□□□ -0.19
SORT1-203ENST00000471996 VSTM2AQ8TAG5 236 aa13.86□□□□□ -0.19
SORT1-203ENST00000471996 TMEM167AQ8TBQ9 72 aa13.86□□□□□ -0.19
SORT1-203ENST00000471996 CDK1P06493 297 aa13.85□□□□□ -0.19
SORT1-203ENST00000471996 CTSDP07339 412 aaPredicted RBP13.85□□□□□ -0.19
SORT1-203ENST00000471996 RPA2P15927 270 aa13.85□□□□□ -0.19
SORT1-203ENST00000471996 PSMD7P51665 324 aa13.85□□□□□ -0.19
SORT1-203ENST00000471996 PUSL1Q8N0Z8 303 aaKnown RBP13.85□□□□□ -0.19
SORT1-203ENST00000471996 POM121L12Q8N7R1 296 aa13.85□□□□□ -0.19
SORT1-203ENST00000471996 GINS4Q9BRT9 223 aa13.85□□□□□ -0.19
SORT1-203ENST00000471996 EFCAB10A6NFE3 127 aa13.84□□□□□ -0.19
SORT1-203ENST00000471996 M0R2N4 97 aa13.84□□□□□ -0.19
SORT1-203ENST00000471996 TGOLN2O43493 480 aa13.84□□□□□ -0.19
SORT1-203ENST00000471996 REG1AP05451 166 aa13.84□□□□□ -0.19
SORT1-203ENST00000471996 FCGR3AP08637 254 aa13.84□□□□□ -0.19
SORT1-203ENST00000471996 CMC4P56277 68 aaPredicted RBP13.84□□□□□ -0.19
SORT1-203ENST00000471996 IRF3Q14653 427 aa13.84□□□□□ -0.19
SORT1-203ENST00000471996 P2RY14Q15391 338 aa13.84□□□□□ -0.19
SORT1-203ENST00000471996 PVRIGQ6DKI7 326 aa13.84□□□□□ -0.19
SORT1-203ENST00000471996 SMPD3Q9NY59 655 aaPredicted RBP13.84□□□□□ -0.19
SORT1-203ENST00000471996 MRPS7Q9Y2R9 242 aaKnown RBP13.84□□□□□ -0.19
SORT1-203ENST00000471996 PRELID3BQ9Y3B1 194 aa13.84□□□□□ -0.19
SORT1-203ENST00000471996 LRP1BQ9NZR2 4599 aa13.84□□□□□ -0.19
SORT1-203ENST00000471996 HERC1Q15751 4861 aa13.84□□□□□ -0.19
SORT1-203ENST00000471996 TRAV10A0A0B4J240 114 aa13.83□□□□□ -0.2
SORT1-203ENST00000471996 PTBP1P26599 531 aaKnown RBP eCLIP13.83□□□□□ -0.23e-17■■■■■ 76.4
SORT1-203ENST00000471996 MRPS15P82914 257 aaKnown RBP13.83□□□□□ -0.2
SORT1-203ENST00000471996 ST3GAL4Q11206 333 aa13.83□□□□□ -0.2
SORT1-203ENST00000471996 TMEM187Q14656 261 aa13.83□□□□□ -0.2
SORT1-203ENST00000471996 KCTD9Q7L273 389 aa13.83□□□□□ -0.2
SORT1-203ENST00000471996 SSX9Q7RTT3 188 aa13.83□□□□□ -0.2
SORT1-203ENST00000471996 H1FOOQ8IZA3 346 aaPredicted RBP13.83□□□□□ -0.2
SORT1-203ENST00000471996 OR56B1Q8NGI3 324 aa13.83□□□□□ -0.2
SORT1-203ENST00000471996 KCNK7Q9Y2U2 307 aa13.83□□□□□ -0.2
SORT1-203ENST00000471996 CA1P00915 261 aaPredicted RBP13.82□□□□□ -0.2
SORT1-203ENST00000471996 HLA-DMBP28068 263 aa13.82□□□□□ -0.2
SORT1-203ENST00000471996 WNT4P56705 351 aa13.82□□□□□ -0.2
SORT1-203ENST00000471996 RPL30P62888 115 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms