RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 OR51H1Q8NH63 302 aa10.93□□□□□ -0.66
TOP3B-215ENST00000470338 OR52I2Q8NH67 350 aa10.93□□□□□ -0.66
TOP3B-215ENST00000470338 CD300LFQ8TDQ1 290 aa10.93□□□□□ -0.66
TOP3B-215ENST00000470338 DPF1Q92782 380 aa10.93□□□□□ -0.66
TOP3B-215ENST00000470338 PHB2Q99623 299 aa10.93□□□□□ -0.66
TOP3B-215ENST00000470338 SPIN2AQ99865 258 aa10.93□□□□□ -0.66
TOP3B-215ENST00000470338 SPIN2BQ9BPZ2 258 aa10.93□□□□□ -0.66
TOP3B-215ENST00000470338 ZNF355PQ9NSJ1 428 aa10.93□□□□□ -0.66
TOP3B-215ENST00000470338 BET1LQ9NYM9 111 aa10.93□□□□□ -0.66
TOP3B-215ENST00000470338 MTFP1Q9UDX5 166 aa10.93□□□□□ -0.66
TOP3B-215ENST00000470338 A0A0G2JLM5 398 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 LINC01619G3V211 115 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 H3BMQ9 156 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 GPR31O00270 319 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 IGHV3-11P01762 117 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 HSPB1P04792 205 aaKnown RBP10.92□□□□□ -0.66
TOP3B-215ENST00000470338 OR9G9P0C7N8 305 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 APELAP0DMC3 54 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 HOXD3P31249 432 aaPredicted RBP10.92□□□□□ -0.66
TOP3B-215ENST00000470338 UCP3P55916 312 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 C10orf55Q5SWW7 151 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 AADACL3Q5VUY0 350 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 OR4A47Q6IF82 309 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 LPCAT3Q6P1A2 487 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 LAX1Q8IWV1 398 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 CMTM1Q8IZ96 169 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 TTC9CQ8N5M4 171 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 OR4A5Q8NH83 315 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 ISOC1Q96CN7 298 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 PLEKHA2Q9HB19 425 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 COA4Q9NYJ1 87 aa10.92□□□□□ -0.66
TOP3B-215ENST00000470338 IGHV4OR15-8A0A075B7B6 117 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 A0A087WW49 117 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 C13orf42A0A1B0GVH6 325 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 TEX22C9J3V5 150 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 E7EUB6 86 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 M0QYG6 137 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 RLN1P04808 185 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 ZNF735P0CB33 412 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 NQO2P16083 231 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 F2RP25116 425 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 RPL8P62917 257 aaKnown RBP10.91□□□□□ -0.66
TOP3B-215ENST00000470338 RNASE12Q5GAN4 147 aaKnown RBP10.91□□□□□ -0.66
TOP3B-215ENST00000470338 C9orf66Q5T8R8 295 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 SSX9Q7RTT3 188 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 FCAMRQ8WWV6 532 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 DCUN1D4Q92564 292 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 DGCR14Q96DF8 476 aaKnown RBP10.91□□□□□ -0.66
TOP3B-215ENST00000470338 USMG5Q96IX5 58 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 RSRP1Q9BUV0 290 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 SLIRPQ9GZT3 109 aaKnown RBP10.91□□□□□ -0.66
TOP3B-215ENST00000470338 COMMD9Q9P000 198 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 SCOCQ9UIL1 159 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 CEPT1Q9Y6K0 416 aa10.91□□□□□ -0.66
TOP3B-215ENST00000470338 TRBV9A0A0B4J1U6 114 aa10.9□□□□□ -0.66
TOP3B-215ENST00000470338 A0A1B0GW64 132 aa10.9□□□□□ -0.66
TOP3B-215ENST00000470338 SEC14L6B5MCN3 397 aa10.9□□□□□ -0.66
TOP3B-215ENST00000470338 GABARAPH6UMI1 98 aa10.9□□□□□ -0.66
TOP3B-215ENST00000470338 MPPED1O15442 326 aa10.9□□□□□ -0.66
TOP3B-215ENST00000470338 NOL3O60936 208 aaKnown RBP10.9□□□□□ -0.66
TOP3B-215ENST00000470338 RBMXL2O75526 392 aaKnown RBP10.9□□□□□ -0.66
TOP3B-215ENST00000470338 S1PR2O95136 353 aa10.9□□□□□ -0.66
TOP3B-215ENST00000470338 CD3DP04234 171 aa10.9□□□□□ -0.66
TOP3B-215ENST00000470338 FGF2P09038 288 aa10.9□□□□□ -0.66
TOP3B-215ENST00000470338 TBPP20226 339 aa10.9□□□□□ -0.66
TOP3B-215ENST00000470338 RPL27AP46776 148 aaKnown RBP10.9□□□□□ -0.66
TOP3B-215ENST00000470338 SLURP1P55000 103 aa10.9□□□□□ -0.66
TOP3B-215ENST00000470338 MRPS10P82664 201 aaKnown RBP10.9□□□□□ -0.66
TOP3B-215ENST00000470338 SSBP1Q04837 148 aaKnown RBP10.9□□□□□ -0.66
TOP3B-215ENST00000470338 MRAPQ8TCY5 172 aa10.9□□□□□ -0.66
TOP3B-215ENST00000470338 DLX4Q92988 240 aaPredicted RBP10.9□□□□□ -0.66
TOP3B-215ENST00000470338 SLC2A9Q9NRM0 540 aa10.9□□□□□ -0.66
TOP3B-215ENST00000470338 FAM212BQ9NTI7 297 aaPredicted RBP10.9□□□□□ -0.66
TOP3B-215ENST00000470338 RABL2AQ9UBK7 228 aaPredicted RBP10.9□□□□□ -0.66
TOP3B-215ENST00000470338 ZMAT5Q9UDW3 170 aaKnown RBP10.9□□□□□ -0.66
TOP3B-215ENST00000470338 RABL2BQ9UNT1 228 aa10.9□□□□□ -0.66
TOP3B-215ENST00000470338 SORL1Q92673 2214 aa10.9□□□□□ -0.66
TOP3B-215ENST00000470338 HMX3A6NHT5 357 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 K7EIL1 84 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 UPK2O00526 184 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 OVOL1O14753 267 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 CD74P04233 296 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 IFNA6P05013 189 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 HLA-GP17693 338 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 LPAR6P43657 344 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 DGCR2P98153 550 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 ZNF45Q02386 682 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 ZNF585BQ52M93 769 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 RNASE10Q5GAN6 216 aaKnown RBP10.89□□□□□ -0.67
TOP3B-215ENST00000470338 ZNF343Q6P1L6 599 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 SLC25A42Q86VD7 318 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 LHFPL1Q86WI0 220 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 SLC38A6Q8IZM9 456 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 CADM3Q8N126 398 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 ARRDC1Q8N5I2 433 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 TMEM229BQ8NBD8 167 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 DIRAS2Q96HU8 199 aa10.89□□□□□ -0.67
TOP3B-215ENST00000470338 NXF2Q9GZY0 626 aaKnown RBP10.89□□□□□ -0.67
TOP3B-215ENST00000470338 RANGRFQ9HD47 186 aaPredicted RBP10.89□□□□□ -0.67
TOP3B-215ENST00000470338 HRASLSQ9HDD0 168 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms