RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 LINC00303Q3SY05 128 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 GAGE2EQ4V326 116 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 MIDNQ504T8 468 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 SPRNQ5BIV9 151 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 TTC32Q5I0X7 151 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 LCE3BQ5TA77 95 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 SERTAD4-AS1Q5TG53 156 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 ANKRD37Q7Z713 158 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 TRPT1Q86TN4 253 aaKnown RBP4.23□□□□□ -1.73
COL3A1-205ENST00000470167 PRIMA1Q86XR5 153 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 SLC25A45Q8N413 288 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 LINC01356Q8N9X3 169 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 WDR31Q8NA23 367 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 C2orf15Q8WU43 125 aaKnown RBP4.23□□□□□ -1.73
COL3A1-205ENST00000470167 APOBEC4Q8WW27 367 aaKnown RBP4.23□□□□□ -1.73
COL3A1-205ENST00000470167 AQP3Q92482 292 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 NPIPB3Q92617 1050 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 BMFQ96LC9 184 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 AMELYQ99218 206 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 VGLL1Q99990 258 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 POLR2J2Q9GZM3 115 aaKnown RBP4.23□□□□□ -1.73
COL3A1-205ENST00000470167 COMMD5Q9GZQ3 224 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 DLL3Q9NYJ7 618 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 TAAR3PQ9P1P4 343 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 GAGE2DQ9UEU5 116 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 POLR1DQ9Y2S0 133 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 BRWD3Q6RI45 1802 aa4.23□□□□□ -1.73
COL3A1-205ENST00000470167 CACNA1FO60840 1977 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 COL24A1Q17RW2 1714 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 A0A1B0GV50 99 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 IRGMA1A4Y4 181 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 EEF1E1-BLOC1S5C9J1V9 151 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 OVOL1O14753 267 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 LMX1BO60663 402 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 LDB3O75112 727 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 CXorf1O96002 111 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 NAPSAO96009 420 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 HLA-DQA2P01906 255 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 GYPAP02724 150 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 HLA-DPB1P04440 258 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 SLC25A5P05141 298 aaKnown RBP4.22□□□□□ -1.73
COL3A1-205ENST00000470167 SP9P0CG40 484 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 CTGFP29279 349 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 FAUP35544 74 aaKnown RBP4.22□□□□□ -1.73
COL3A1-205ENST00000470167 CCR2P41597 374 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 WDR5P61964 334 aaKnown RBP4.22□□□□□ -1.73
COL3A1-205ENST00000470167 SNRPGP62308 76 aaKnown RBP4.22□□□□□ -1.73
COL3A1-205ENST00000470167 HERVK_113P63121 156 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 CEACAM16Q2WEN9 425 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 ZNF506Q5JVG8 444 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 IBA57Q5T440 356 aaKnown RBP4.22□□□□□ -1.73
COL3A1-205ENST00000470167 ASPHD1Q5U4P2 390 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 SP5Q6BEB4 398 aaPredicted RBP4.22□□□□□ -1.73
COL3A1-205ENST00000470167 SLC35E4Q6ICL7 350 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 LEG1Q6P5S2 330 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 TMEM14EPQ6UXP3 125 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 SEM1Q6ZVN7 128 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 EXOC3-AS1Q8N2X6 119 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 SIGLECL1Q8N7X8 197 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 OR5H2Q8NGV7 314 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 OTOSQ8NHW6 89 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 MBD3L2Q8NHZ7 208 aaPredicted RBP4.22□□□□□ -1.73
COL3A1-205ENST00000470167 ZNF564Q8TBZ8 553 aaPredicted RBP4.22□□□□□ -1.73
COL3A1-205ENST00000470167 ELSPBP1Q96BH3 223 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 RARRES2Q99969 163 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 ZNF670Q9BS34 389 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 TMEM70Q9BUB7 260 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 EIF5A2Q9GZV4 153 aaKnown RBP4.22□□□□□ -1.73
COL3A1-205ENST00000470167 PBOV1Q9GZY1 135 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 IKZF5Q9H5V7 419 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 ISG20L2Q9H9L3 353 aaKnown RBP4.22□□□□□ -1.73
COL3A1-205ENST00000470167 PLAC1Q9HBJ0 212 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 SDR39U1Q9NRG7 319 aaPredicted RBP4.22□□□□□ -1.73
COL3A1-205ENST00000470167 ABRACLQ9P1F3 81 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 MRPS17Q9Y2R5 130 aaKnown RBP4.22□□□□□ -1.73
COL3A1-205ENST00000470167 CHD3Q12873 2000 aaKnown RBP4.22□□□□□ -1.73
COL3A1-205ENST00000470167 PXDNQ92626 1479 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 SETXQ7Z333 2677 aaKnown RBP4.22□□□□□ -1.73
COL3A1-205ENST00000470167 ALS2Q96Q42 1657 aa4.22□□□□□ -1.73
COL3A1-205ENST00000470167 FAM208AQ9UK61 1670 aaKnown RBP4.22□□□□□ -1.73
COL3A1-205ENST00000470167 PAPPAQ13219 1627 aa4.21□□□□□ -1.73
COL3A1-205ENST00000470167 COL6A3P12111 3177 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 C1orf226A1L170 272 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 DPRXA6NFQ7 191 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 J3QQQ9 107 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 M0QZQ0 153 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 M0R2P5 195 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 SLC17A2O00624 439 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 ISLRO14498 428 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 JTBO76095 146 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 NTN1O95631 604 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 IGHG2P01859 326 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 ELANEP08246 267 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 GABRG2P18507 467 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 VDAC1P21796 283 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 HOXD3P31249 432 aaPredicted RBP4.21□□□□□ -1.74
COL3A1-205ENST00000470167 ACVRL1P37023 503 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 RBMXP38159 391 aaKnown RBP4.21□□□□□ -1.74
COL3A1-205ENST00000470167 ASIPP42127 132 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 EMDP50402 254 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms