RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 ABCA2Q9BZC7 2435 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 CD5LO43866 347 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 LY6G6DO95868 133 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 MOSP00540 346 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 HNRNPCP07910 306 aaKnown RBP eCLIP10.23□□□□□ -0.77
TRAF4-208ENST00000469529 FAM106CPP0CH98 169 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 PET100P0DJ07 73 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 IGHV4-38-2P0DP08 117 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 TAS2R30P59541 319 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 VMA21Q3ZAQ7 101 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 PDZD9Q8IXQ8 264 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 OR11H4Q8NGC9 324 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 RNASE11Q8TAA1 199 aaKnown RBP10.23□□□□□ -0.77
TRAF4-208ENST00000469529 EAF1Q96JC9 268 aaPredicted RBP10.23□□□□□ -0.77
TRAF4-208ENST00000469529 HARBI1Q96MB7 349 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 C11orf1Q9H5F2 150 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 TMEM14BQ9NUH8 114 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 TMEM140Q9NV12 185 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 TMEM160Q9NX00 188 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 CACNG5Q9UF02 275 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 NUP50Q9UKX7 468 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 PRNDQ9UKY0 176 aa10.23□□□□□ -0.77
TRAF4-208ENST00000469529 FOXA2Q9Y261 457 aaPredicted RBP10.23□□□□□ -0.77
TRAF4-208ENST00000469529 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.23□□□□□ -0.772e-11■■■■□ 24.1
TRAF4-208ENST00000469529 TRAV40A0A0B4J280 105 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 INS-IGF2F8WCM5 200 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 H0YIZ8 118 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 DEDDO75618 318 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 KBTBD11O94819 623 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 NDUFA3O95167 84 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 OR9G9P0C7N8 305 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 MAS1LP35410 378 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 SPCS3P61009 180 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 HSPE1P61604 102 aaKnown RBP10.22□□□□□ -0.77
TRAF4-208ENST00000469529 KRTAP1-1Q07627 177 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 RAB32Q13637 225 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 CXorf66Q5JRM2 361 aaPredicted RBP10.22□□□□□ -0.77
TRAF4-208ENST00000469529 OR4A16Q8NH70 328 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 OR1S1Q8NH92 325 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 THAP6Q8TBB0 222 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 C17orf50Q8WW18 174 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 RITA1Q96K30 269 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 RAB40CQ96S21 281 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 PLSCR3Q9NRY6 295 aa10.22□□□□□ -0.77
TRAF4-208ENST00000469529 ZNF469Q96JG9 3925 aaPredicted RBP10.22□□□□□ -0.77
TRAF4-208ENST00000469529 WNK2Q9Y3S1 2297 aa10.21□□□□□ -0.77
TRAF4-208ENST00000469529 A0A1W2PRD5 423 aa10.21□□□□□ -0.77
TRAF4-208ENST00000469529 A0A1W2PRF3 423 aa10.21□□□□□ -0.77
TRAF4-208ENST00000469529 A0A1W2PRM7 423 aa10.21□□□□□ -0.77
TRAF4-208ENST00000469529 C15orf61A6NNL5 157 aa10.21□□□□□ -0.77
TRAF4-208ENST00000469529 E5RGE8 158 aa10.21□□□□□ -0.77
TRAF4-208ENST00000469529 K7EPK0 472 aa10.21□□□□□ -0.77
TRAF4-208ENST00000469529 MED6O75586 246 aa10.21□□□□□ -0.77
TRAF4-208ENST00000469529 FBP1P09467 338 aa10.21□□□□□ -0.77
TRAF4-208ENST00000469529 SAA1P0DJI8 122 aaPredicted RBP10.21□□□□□ -0.77
TRAF4-208ENST00000469529 TNFRSF9Q07011 255 aa10.21□□□□□ -0.77
TRAF4-208ENST00000469529 PSG5Q15238 335 aa10.21□□□□□ -0.77
TRAF4-208ENST00000469529 VKORC1L1Q8N0U8 176 aa10.21□□□□□ -0.77
TRAF4-208ENST00000469529 FAM71E2Q8N5Q1 922 aa10.21□□□□□ -0.77
TRAF4-208ENST00000469529 OR5B3Q8NH48 314 aa10.21□□□□□ -0.77
TRAF4-208ENST00000469529 PIFOQ8TCI5 191 aa10.21□□□□□ -0.77
TRAF4-208ENST00000469529 NSG2Q9Y328 171 aa10.21□□□□□ -0.77
TRAF4-208ENST00000469529 NF1P21359 2839 aa10.21□□□□□ -0.78
TRAF4-208ENST00000469529 IGHV3-72A0A0B4J1Y9 119 aa10.2□□□□□ -0.78
TRAF4-208ENST00000469529 A0A0U1RQK1 487 aa10.2□□□□□ -0.78
TRAF4-208ENST00000469529 SYNGR2O43760 224 aa10.2□□□□□ -0.78
TRAF4-208ENST00000469529 IGKV1D-33P01593 117 aa10.2□□□□□ -0.78
TRAF4-208ENST00000469529 IGKV1-33P01594 117 aa10.2□□□□□ -0.78
TRAF4-208ENST00000469529 P2RY1P47900 373 aa10.2□□□□□ -0.78
TRAF4-208ENST00000469529 ATP5IP56385 69 aaPredicted RBP10.2□□□□□ -0.78
TRAF4-208ENST00000469529 RPL8P62917 257 aaKnown RBP10.2□□□□□ -0.78
TRAF4-208ENST00000469529 IZUMO4Q1ZYL8 232 aa10.2□□□□□ -0.78
TRAF4-208ENST00000469529 MRGPRG-AS1Q2M3A8 158 aa10.2□□□□□ -0.78
TRAF4-208ENST00000469529 KRTAP21-3Q3LHN1 58 aa10.2□□□□□ -0.78
TRAF4-208ENST00000469529 ZNF546Q86UE3 836 aa10.2□□□□□ -0.78
TRAF4-208ENST00000469529 SMIM8Q96KF7 97 aa10.2□□□□□ -0.78
TRAF4-208ENST00000469529 CIB3Q96Q77 187 aaPredicted RBP10.2□□□□□ -0.78
TRAF4-208ENST00000469529 C1RLQ9NZP8 487 aa10.2□□□□□ -0.78
TRAF4-208ENST00000469529 TNFSF18Q9UNG2 199 aa10.2□□□□□ -0.78
TRAF4-208ENST00000469529 RCL1Q9Y2P8 373 aaKnown RBP10.2□□□□□ -0.78
TRAF4-208ENST00000469529 SIGLEC9Q9Y336 463 aa10.2□□□□□ -0.78
TRAF4-208ENST00000469529 FAM96BQ9Y3D0 163 aa10.2□□□□□ -0.78
TRAF4-208ENST00000469529 WSB1Q9Y6I7 421 aa10.2□□□□□ -0.78
TRAF4-208ENST00000469529 TRAV3A0A0B4J244 114 aa10.19□□□□□ -0.78
TRAF4-208ENST00000469529 SMLR1H3BR10 107 aa10.19□□□□□ -0.78
TRAF4-208ENST00000469529 BOLA2-SMG1P6H3BVE0 249 aa10.19□□□□□ -0.78
TRAF4-208ENST00000469529 RRHO14718 337 aa10.19□□□□□ -0.78
TRAF4-208ENST00000469529 NBR2O15453 112 aa10.19□□□□□ -0.78
TRAF4-208ENST00000469529 CHST1O43916 411 aa10.19□□□□□ -0.78
TRAF4-208ENST00000469529 SNRNP70P08621 437 aaKnown RBP10.19□□□□□ -0.78
TRAF4-208ENST00000469529 PVALBP20472 110 aaPredicted RBP10.19□□□□□ -0.78
TRAF4-208ENST00000469529 PAX9P55771 341 aa10.19□□□□□ -0.78
TRAF4-208ENST00000469529 ZNF345Q14585 488 aa10.19□□□□□ -0.78
TRAF4-208ENST00000469529 PRSS8Q16651 343 aa10.19□□□□□ -0.78
TRAF4-208ENST00000469529 BRD3OSQ6XYD6 125 aa10.19□□□□□ -0.78
TRAF4-208ENST00000469529 ACOT7LQ6ZUV0 252 aa10.19□□□□□ -0.78
TRAF4-208ENST00000469529 SSX9Q7RTT3 188 aa10.19□□□□□ -0.78
TRAF4-208ENST00000469529 PPP1R27Q86WC6 154 aa10.19□□□□□ -0.78
TRAF4-208ENST00000469529 MMD2Q8IY49 270 aa10.19□□□□□ -0.78
TRAF4-208ENST00000469529 AQP10Q96PS8 301 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms