RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 HIST1H2BJP06899 126 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 HIST1H2BOP23527 126 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 HIST1H2BBP33778 126 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 DLX1P56177 255 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 LOXL3P58215 753 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 HIST1H2BDP58876 126 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 SELENOVP59797 346 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 HIST1H2BCP62807 126 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 S100A12P80511 92 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 ZNF124Q15973 351 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 HIST2H2BEQ16778 126 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 PDLIM3Q53GG5 364 aaPredicted RBP14.73□□□□□ -0.05
MCF2L-221ENST00000469415 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.73□□□□□ -0.05
MCF2L-221ENST00000469415 C1orf185Q5T7R7 199 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 ZNF66Q6ZN08 573 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 HIST1H2BHQ93079 126 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 HIST1H2BNQ99877 126 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 HIST1H2BMQ99879 126 aa14.73□□□□□ -0.05
MCF2L-221ENST00000469415 BSNQ9UPA5 3926 aa14.72□□□□□ -0.05
MCF2L-221ENST00000469415 TRAV1-1A0A0B4J248 108 aa14.72□□□□□ -0.05
MCF2L-221ENST00000469415 CLDN34H7C241 214 aa14.72□□□□□ -0.05
MCF2L-221ENST00000469415 GLRXP35754 106 aa14.72□□□□□ -0.05
MCF2L-221ENST00000469415 CDC34P49427 236 aaPredicted RBP14.72□□□□□ -0.05
MCF2L-221ENST00000469415 TIMM23BQ5SRD1 257 aa14.72□□□□□ -0.05
MCF2L-221ENST00000469415 ZNF251Q9BRH9 671 aa14.72□□□□□ -0.05
MCF2L-221ENST00000469415 MS4A5Q9H3V2 200 aa14.72□□□□□ -0.05
MCF2L-221ENST00000469415 LAMP3Q9UQV4 416 aa14.72□□□□□ -0.05
MCF2L-221ENST00000469415 IGHV1-46P01743 117 aa14.72□□□□□ -0.05
MCF2L-221ENST00000469415 IGHV2-5P01817 119 aa14.72□□□□□ -0.05
MCF2L-221ENST00000469415 PAX6P26367 422 aa14.72□□□□□ -0.05
MCF2L-221ENST00000469415 CCL17Q92583 94 aa14.72□□□□□ -0.05
MCF2L-221ENST00000469415 ABHD17AQ96GS6 310 aa14.72□□□□□ -0.05
MCF2L-221ENST00000469415 YPEL4Q96NS1 127 aa14.72□□□□□ -0.05
MCF2L-221ENST00000469415 ASH1LQ9NR48 2969 aaKnown RBP14.72□□□□□ -0.05
MCF2L-221ENST00000469415 NAV3Q8IVL0 2385 aa14.72□□□□□ -0.05
MCF2L-221ENST00000469415 SVEP1Q4LDE5 3571 aa14.72□□□□□ -0.05
MCF2L-221ENST00000469415 CTXND1A0A1B0GTU2 59 aa14.71□□□□□ -0.05
MCF2L-221ENST00000469415 TRGC1P0CF51 173 aa14.71□□□□□ -0.05
MCF2L-221ENST00000469415 GATA2P23769 480 aaPredicted RBP14.71□□□□□ -0.05
MCF2L-221ENST00000469415 MRPS11P82912 194 aaKnown RBP14.71□□□□□ -0.05
MCF2L-221ENST00000469415 MLANAQ16655 118 aa14.71□□□□□ -0.05
MCF2L-221ENST00000469415 TMEM241Q24JQ0 296 aa14.71□□□□□ -0.05
MCF2L-221ENST00000469415 PRR30Q53SZ7 412 aaPredicted RBP14.71□□□□□ -0.05
MCF2L-221ENST00000469415 OR10D4PQ8NGN7 298 aa14.71□□□□□ -0.05
MCF2L-221ENST00000469415 H1FXQ92522 213 aaKnown RBP14.71□□□□□ -0.05
MCF2L-221ENST00000469415 HIPK2Q9H2X6 1198 aa14.71□□□□□ -0.05
MCF2L-221ENST00000469415 RALYQ9UKM9 306 aaKnown RBP14.71□□□□□ -0.05
MCF2L-221ENST00000469415 TET2Q6N021 2002 aaPredicted RBP14.71□□□□□ -0.05
MCF2L-221ENST00000469415 HPRT1P00492 218 aa14.71□□□□□ -0.05
MCF2L-221ENST00000469415 CCL3L1P16619 93 aa14.71□□□□□ -0.05
MCF2L-221ENST00000469415 CIB3Q96Q77 187 aaPredicted RBP14.71□□□□□ -0.05
MCF2L-221ENST00000469415 C11orf94C9JXX5 98 aa14.71□□□□□ -0.06
MCF2L-221ENST00000469415 IGKV1-16P04430 117 aa14.71□□□□□ -0.06
MCF2L-221ENST00000469415 EIF2S3P41091 472 aaKnown RBP14.71□□□□□ -0.06
MCF2L-221ENST00000469415 FAM3BP58499 235 aaPredicted RBP14.71□□□□□ -0.06
MCF2L-221ENST00000469415 C1orf87Q8N0U7 546 aa14.71□□□□□ -0.06
MCF2L-221ENST00000469415 RNF7Q9UBF6 113 aa14.71□□□□□ -0.06
MCF2L-221ENST00000469415 METTL1Q9UBP6 276 aaKnown RBP14.71□□□□□ -0.06
MCF2L-221ENST00000469415 C17orf58Q2M2W7 97 aa14.7□□□□□ -0.06
MCF2L-221ENST00000469415 BSXQ3C1V8 233 aa14.7□□□□□ -0.06
MCF2L-221ENST00000469415 ABHD5Q8WTS1 349 aa14.7□□□□□ -0.06
MCF2L-221ENST00000469415 TCF19Q9Y242 345 aa14.7□□□□□ -0.06
MCF2L-221ENST00000469415 MALRD1Q5VYJ5 2156 aa14.7□□□□□ -0.06
MCF2L-221ENST00000469415 TRGV10A0A0A0MS01 117 aa14.7□□□□□ -0.06
MCF2L-221ENST00000469415 S100PP25815 95 aa14.7□□□□□ -0.06
MCF2L-221ENST00000469415 CD40P25942 277 aa14.7□□□□□ -0.06
MCF2L-221ENST00000469415 HTD2P86397 168 aa14.7□□□□□ -0.06
MCF2L-221ENST00000469415 SPATA31B1PQ5VZV4 182 aa14.7□□□□□ -0.06
MCF2L-221ENST00000469415 UNQ6494/PRO21346Q6UXR6 183 aa14.7□□□□□ -0.06
MCF2L-221ENST00000469415 COL12A1Q99715 3063 aa14.7□□□□□ -0.06
MCF2L-221ENST00000469415 IFITM10A6NMD0 228 aa14.69□□□□□ -0.06
MCF2L-221ENST00000469415 NDUFB4O95168 129 aa14.69□□□□□ -0.06
MCF2L-221ENST00000469415 KDF1Q8NAX2 398 aaPredicted RBP14.69□□□□□ -0.06
MCF2L-221ENST00000469415 ANKHD1Q8IWZ3 2542 aaKnown RBP14.69□□□□□ -0.06
MCF2L-221ENST00000469415 SOD3P08294 240 aa14.69□□□□□ -0.06
MCF2L-221ENST00000469415 FABP4P15090 132 aa14.69□□□□□ -0.06
MCF2L-221ENST00000469415 RPL23P62829 140 aaKnown RBP14.69□□□□□ -0.06
MCF2L-221ENST00000469415 MZT1Q08AG7 82 aa14.69□□□□□ -0.06
MCF2L-221ENST00000469415 TCF15Q12870 199 aa14.69□□□□□ -0.06
MCF2L-221ENST00000469415 PRSS8Q16651 343 aa14.69□□□□□ -0.06
MCF2L-221ENST00000469415 Q6ZS92 163 aa14.69□□□□□ -0.06
MCF2L-221ENST00000469415 ZNF383Q8NA42 475 aa14.69□□□□□ -0.06
MCF2L-221ENST00000469415 WFIKKN1Q96NZ8 548 aa14.69□□□□□ -0.06
MCF2L-221ENST00000469415 PCGF1Q9BSM1 259 aa14.69□□□□□ -0.06
MCF2L-221ENST00000469415 JPT1Q9UK76 154 aa14.69□□□□□ -0.06
MCF2L-221ENST00000469415 WNK2Q9Y3S1 2297 aa14.69□□□□□ -0.06
MCF2L-221ENST00000469415 H7BYZ3 331 aa14.68□□□□□ -0.06
MCF2L-221ENST00000469415 APELAP0DMC3 54 aa14.68□□□□□ -0.06
MCF2L-221ENST00000469415 NPPCP23582 126 aa14.68□□□□□ -0.06
MCF2L-221ENST00000469415 GPX4P36969 197 aaPredicted RBP14.68□□□□□ -0.06
MCF2L-221ENST00000469415 RELBQ01201 579 aa14.68□□□□□ -0.06
MCF2L-221ENST00000469415 OR4A47Q6IF82 309 aa14.68□□□□□ -0.06
MCF2L-221ENST00000469415 TREML4Q6UXN2 200 aa14.68□□□□□ -0.06
MCF2L-221ENST00000469415 TMEM170AQ8WVE7 144 aa14.68□□□□□ -0.06
MCF2L-221ENST00000469415 S100A2P29034 98 aa14.68□□□□□ -0.06
MCF2L-221ENST00000469415 TMEM37Q8WXS4 190 aa14.68□□□□□ -0.06
MCF2L-221ENST00000469415 NEUROG1Q92886 237 aa14.68□□□□□ -0.06
MCF2L-221ENST00000469415 TOLLIPQ9H0E2 274 aa14.68□□□□□ -0.06
MCF2L-221ENST00000469415 TP53TG5Q9Y2B4 290 aa14.68□□□□□ -0.06
MCF2L-221ENST00000469415 CXorf65A6NEN9 183 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms