RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 H3BUT2 72 aa8.43□□□□□ -1.06
NUP50-214ENST00000469163 ZNF883P0CG24 379 aa8.43□□□□□ -1.06
NUP50-214ENST00000469163 USF1P22415 310 aaPredicted RBP8.43□□□□□ -1.06
NUP50-214ENST00000469163 UQCRFS1P47985 274 aa8.43□□□□□ -1.06
NUP50-214ENST00000469163 SSBP2P81877 361 aaPredicted RBP8.43□□□□□ -1.06
NUP50-214ENST00000469163 Q56UQ5 140 aa8.43□□□□□ -1.06
NUP50-214ENST00000469163 C12orf54Q6X4T0 127 aa8.43□□□□□ -1.06
NUP50-214ENST00000469163 NEGR1Q7Z3B1 354 aa8.43□□□□□ -1.06
NUP50-214ENST00000469163 OR5H2Q8NGV7 314 aa8.43□□□□□ -1.06
NUP50-214ENST00000469163 OR52E5Q8NH55 327 aa8.43□□□□□ -1.06
NUP50-214ENST00000469163 GALMQ96C23 342 aa8.43□□□□□ -1.06
NUP50-214ENST00000469163 WDYHV1Q96HA8 205 aa8.43□□□□□ -1.06
NUP50-214ENST00000469163 ANAPC13Q9BS18 74 aa8.43□□□□□ -1.06
NUP50-214ENST00000469163 DUSP13Q9UII6 198 aa8.43□□□□□ -1.06
NUP50-214ENST00000469163 ZNF835Q9Y2P0 537 aa8.43□□□□□ -1.06
NUP50-214ENST00000469163 IGLV3-12A0A075B6K2 115 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.42□□□□□ -1.06
NUP50-214ENST00000469163 AGFG2O95081 481 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 TGFAP01135 160 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 DAP3P51398 398 aaKnown RBP8.42□□□□□ -1.06
NUP50-214ENST00000469163 ZNF133P52736 654 aaPredicted RBP8.42□□□□□ -1.06
NUP50-214ENST00000469163 PPP1CBP62140 327 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 RUNX1Q01196 453 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 MEF2BQ02080 365 aaPredicted RBP8.42□□□□□ -1.06
NUP50-214ENST00000469163 PRR30Q53SZ7 412 aaPredicted RBP8.42□□□□□ -1.06
NUP50-214ENST00000469163 RNFT1Q5M7Z0 435 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 C20orf196Q8IYI0 205 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 MRM2Q9UI43 246 aaKnown RBP8.42□□□□□ -1.06
NUP50-214ENST00000469163 CREBBPQ92793 2442 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 C21orf140B9A014 251 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 APOA2P02652 100 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 SMIM17P0DL12 118 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 FUT6P51993 359 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 GLYATL3Q5SZD4 288 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 PLCXD3Q63HM9 321 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 DOLPP1Q86YN1 238 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 ZIC4Q8N9L1 334 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 OR51E1Q8TCB6 317 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 PIGTQ969N2 578 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 TMEM230Q96A57 120 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 FAM173AQ9BQD7 235 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 JKAMPQ9P055 326 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 TRAPPC2LQ9UL33 140 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 PXMP4Q9Y6I8 212 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 SONP18583 2426 aaKnown RBP8.42□□□□□ -1.06
NUP50-214ENST00000469163 LIPT2A6NK58 231 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 C1QTNF9BB2RNN3 333 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 NEURL1O76050 574 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 C1QTNF9P0C862 333 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 C3orf79P0CE67 100 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 BCL2P10415 239 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 OR8G5Q8NG78 346 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 OR2K2Q8NGT1 345 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 ST8SIA1Q92185 356 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 QTRT1Q9BXR0 403 aaKnown RBP8.42□□□□□ -1.06
NUP50-214ENST00000469163 PKIBQ9C010 78 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 NPFFR1Q9GZQ6 430 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 ABCA1O95477 2261 aa8.42□□□□□ -1.06
NUP50-214ENST00000469163 CD5LO43866 347 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 ZIC3O60481 467 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 LMX1BO60663 402 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 HPNP05981 417 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 CELA3BP08861 270 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 GATA2P23769 480 aaPredicted RBP8.41□□□□□ -1.06
NUP50-214ENST00000469163 TESK1Q15569 626 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 ZNF787Q6DD87 383 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 LGI3Q8N145 548 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 PPP1R35Q8TAP8 253 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 KLF13Q9Y2Y9 288 aaPredicted RBP8.41□□□□□ -1.06
NUP50-214ENST00000469163 ARL2-SNX15V9GYD0 113 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 DUXBA0A1W2PPF3 345 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 KIAA1324LA8MWY0 1029 aaPredicted RBP8.41□□□□□ -1.06
NUP50-214ENST00000469163 TACSTD2P09758 323 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 ZNF17P17021 662 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 RPL23P62829 140 aaKnown RBP8.41□□□□□ -1.06
NUP50-214ENST00000469163 CXorf67Q86X51 503 aaPredicted RBP8.41□□□□□ -1.06
NUP50-214ENST00000469163 TXNIPQ9H3M7 391 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 C1orf123Q9NWV4 160 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 HIVEP3Q5T1R4 2406 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 C5orf49A4QMS7 147 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 LRP5LA4QPB2 252 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 MS4A18H0YCH9 400 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 IGLL1P15814 213 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 CBLN1P23435 193 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 MS4A18Q3C1V0 323 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 KCTD18Q6PI47 426 aaPredicted RBP8.41□□□□□ -1.06
NUP50-214ENST00000469163 STPG3Q8N7X2 389 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 GPR84Q9NQS5 396 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 TP53TG3Q9ULZ0 132 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 DHDHQ9UQ10 334 aa8.41□□□□□ -1.06
NUP50-214ENST00000469163 OR6C6A6NF89 314 aa8.4□□□□□ -1.06
NUP50-214ENST00000469163 SLC22A20A6NK97 555 aa8.4□□□□□ -1.06
NUP50-214ENST00000469163 KLF4O43474 513 aa8.4□□□□□ -1.06
NUP50-214ENST00000469163 BGLAPP02818 100 aa8.4□□□□□ -1.06
NUP50-214ENST00000469163 GPX1P07203 203 aa8.4□□□□□ -1.06
NUP50-214ENST00000469163 NPY1RP25929 384 aa8.4□□□□□ -1.06
NUP50-214ENST00000469163 SUPT4H1P63272 117 aaKnown RBP8.4□□□□□ -1.06
NUP50-214ENST00000469163 ANXA2RQ3ZCQ2 193 aa8.4□□□□□ -1.06
NUP50-214ENST00000469163 HOGA1Q86XE5 327 aa8.4□□□□□ -1.06
NUP50-214ENST00000469163 FAM19A2Q8N3H0 131 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms