RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 REEP6Q96HR9 211 aa3.18□□□□□ -1.9
SCFD1-205ENST00000469043 ABHD14BQ96IU4 210 aa3.18□□□□□ -1.9
SCFD1-205ENST00000469043 THTPAQ9BU02 230 aa3.18□□□□□ -1.9
SCFD1-205ENST00000469043 MAP1LC3BQ9GZQ8 125 aa3.18□□□□□ -1.9
SCFD1-205ENST00000469043 MED28Q9H204 178 aa3.18□□□□□ -1.9
SCFD1-205ENST00000469043 C8orf17Q9NRJ1 99 aa3.18□□□□□ -1.9
SCFD1-205ENST00000469043 OR52A1Q9UKL2 312 aa3.18□□□□□ -1.9
SCFD1-205ENST00000469043 PRNDQ9UKY0 176 aa3.18□□□□□ -1.9
SCFD1-205ENST00000469043 TP53TG3Q9ULZ0 132 aa3.18□□□□□ -1.9
SCFD1-205ENST00000469043 ANAPC10Q9UM13 185 aa3.18□□□□□ -1.9
SCFD1-205ENST00000469043 SHANK3Q9BYB0 1731 aa3.18□□□□□ -1.9
SCFD1-205ENST00000469043 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.18□□□□□ -1.9
SCFD1-205ENST00000469043 ZNF638Q14966 1978 aaKnown RBP3.18□□□□□ -1.9
SCFD1-205ENST00000469043 NLRC5Q86WI3 1866 aa3.18□□□□□ -1.9
SCFD1-205ENST00000469043 LAMB4A4D0S4 1761 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 DICER1Q9UPY3 1922 aaKnown RBP3.17□□□□□ -1.9
SCFD1-205ENST00000469043 ATAD5Q96QE3 1844 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 CARMIL3Q8ND23 1372 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 NRAPQ86VF7 1730 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 IGHV1-45A0A0A0MS14 117 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 IGKV1-6A0A0C4DH72 117 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 TRAPPC13A5PLN9 417 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 M0R381 172 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 ZNF207O43670 478 aaKnown RBP3.17□□□□□ -1.9
SCFD1-205ENST00000469043 HLA-DRB1P01911 266 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 C1QBP02746 253 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 OR10J4P0C629 311 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 ZNF688P0C7X2 276 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 GABRA3P34903 492 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 PHBP35232 272 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 NUDT1P36639 197 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 TPI1P60174 286 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 RPS20P60866 119 aaKnown RBP3.17□□□□□ -1.9
SCFD1-205ENST00000469043 GNG5P63218 68 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 ATP5G2Q06055 141 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 SURF2Q15527 256 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-205ENST00000469043 RNASE13Q5GAN3 156 aaKnown RBP3.17□□□□□ -1.9
SCFD1-205ENST00000469043 FAM78AQ5JUQ0 283 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 SAMD13Q5VXD3 122 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 DCUN1D2Q6PH85 259 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 TMEM256Q8N2U0 113 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 GDPD1Q8N9F7 314 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 OR4K5Q8NGD3 323 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 LINC01006Q8NI28 216 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 CNBD2Q96M20 576 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 OR2A5Q96R48 311 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 TMEM147Q9BVK8 224 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 TMEM138Q9NPI0 162 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 ZNF331Q9NQX6 463 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-205ENST00000469043 PRTFDC1Q9NRG1 225 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 PRR34Q9NV39 138 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 MED29Q9NX70 200 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 DHCR7Q9UBM7 475 aaKnown RBP3.17□□□□□ -1.9
SCFD1-205ENST00000469043 DNAJC12Q9UKB3 198 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 OTOFQ9HC10 1997 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 UBR2Q8IWV8 1755 aa3.17□□□□□ -1.9
SCFD1-205ENST00000469043 KIAA1671Q9BY89 1806 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 AGRNO00468 2067 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 NOTCH2Q04721 2471 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 IGHV7-4-1A0A0J9YVY3 117 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 A0A1B0GVX0 72 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 A8MU10 97 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 H0YJW9 148 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 H3BSA7 217 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 PFDN1O60925 122 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 POP7O75817 140 aaKnown RBP3.16□□□□□ -1.9
SCFD1-205ENST00000469043 CRYZL1O95825 349 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 CXorf1O96002 111 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 HLA-DQB2P05538 268 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 DNAH10OSP0CZ25 163 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 IGHV1-8P0DP01 117 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 CPMP14384 443 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 ERP29P30040 261 aaKnown RBP3.16□□□□□ -1.9
SCFD1-205ENST00000469043 GLRXP35754 106 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 LINC00313P59037 77 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 C9orf129Q5T035 196 aaKnown RBP3.16□□□□□ -1.9
SCFD1-205ENST00000469043 LAIR2Q6ISS4 152 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 MORN3Q6PF18 240 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-205ENST00000469043 OSR2Q8N2R0 312 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 FAM24BQ8N5W8 94 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 ST6GALNAC3Q8NDV1 305 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 TYMSOSQ8TAI1 123 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 C2orf15Q8WU43 125 aaKnown RBP3.16□□□□□ -1.9
SCFD1-205ENST00000469043 ROPN1LQ96C74 230 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 ZNF382Q96SR6 550 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 TSC22D3Q99576 134 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 CGREF1Q99674 301 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 SH3BGRL3Q9H299 93 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 RPP21Q9H633 154 aaKnown RBP3.16□□□□□ -1.9
SCFD1-205ENST00000469043 CXorf21Q9HAI6 301 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 HMG20AQ9NP66 347 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 LYRM2Q9NU23 88 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-205ENST00000469043 RFNGQ9Y644 331 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 ADAMTS9Q9P2N4 1935 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 MRC1P22897 1456 aa3.16□□□□□ -1.9
SCFD1-205ENST00000469043 SCN1AP35498 2009 aa3.15□□□□□ -1.9
SCFD1-205ENST00000469043 LRP6O75581 1613 aa3.15□□□□□ -1.9
SCFD1-205ENST00000469043 KIF13BQ9NQT8 1826 aa3.15□□□□□ -1.91
SCFD1-205ENST00000469043 MYH11P35749 1972 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms